CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, vacuole

Predictor Summary:

nucleus 2
mitochondrion 2
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus, vacuole
Any Predictor:	mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000206.1-P	Field mustard	cytosol, nucleus, vacuole	99.41	99.11
CDY22482	Canola	mitochondrion	96.14	94.46
CDY22480	Canola	vacuole	49.26	72.49
CDY35439	Canola	extracellular, vacuole	67.66	68.47
AT2G40815.1	Thale cress	extracellular, plasma membrane, plastid	70.33	64.58
CDY22481	Canola	cytosol, extracellular, nucleus	41.25	62.05
Solyc03g095300.2.1	Tomato	mitochondrion	22.85	53.47
VIT_13s0067g00140.t01	Wine grape	extracellular, mitochondrion, nucleus, plasma membrane	43.62	45.51
PGSC0003DMT400013484	Potato	cytosol, golgi, mitochondrion, nucleus	43.03	45.45
KRH16945	Soybean	mitochondrion	40.65	43.77
KRH72560	Soybean	mitochondrion	41.84	43.52
TraesCS3A01G341500.1	Wheat	mitochondrion	35.61	38.46
TraesCS3B01G373600.1	Wheat	mitochondrion	35.31	38.14
TraesCS3D01G335200.1	Wheat	mitochondrion	35.01	37.82
GSMUA_Achr7P21910_001	Banana	mitochondrion	35.61	37.5
KRH64243	Soybean	extracellular, plasma membrane	36.5	36.94
KRH53687	Soybean	plasma membrane	36.5	36.94
EES01658	Sorghum	mitochondrion	33.23	35.9
Os01t0818100-00	Rice	mitochondrion	32.05	34.84
Zm00001d043082_P001	Maize	nucleus, peroxisome, plastid	32.05	34.29

Protein Annotations

EnsemblPlants:CDY35438	EnsemblPlantsGene:GSBRNA2T00058437001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR32246	PANTHER:PTHR32246:SF15	ProteinID:CDY35438	ProteinID:CDY35438.1	SEG:seg
SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0004EEA425	UniProt:A0A078HF51	MapMan:35.2	:

Description

BnaA03g19220DBnaA03g19220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HF51]

Coordinates

chrLK032351:+:359357..360837

Molecular Weight (calculated)

36267.6 Da

IEP (calculated)

9.085

GRAVY (calculated)

-0.473

Length

337 amino acids

Sequence
(BLAST)

001: MGKTHIEICL ISARGLRVGT GFGSSLLKHQ WYAVGWIDPE SKYCTTIDAS RSDNPLWRTK FATLLDDDDS KIQALHVEVY SREPIFLRKK LHGSATVSLK
101: EFLVKYKKQS SVVEETGSYQ LRKVNSSKAQ GFVDVSIRVS AERQDFGGFT GDFGGVMLSN NSGYNNTSGQ NYMSGSSQHP FASLNQPNNP NPFSVPPDKH
201: HSPMPNPLTN NASPQMQQPY YPPPPPMQQP YYPPPPPSTS TAGYMPSYMP RSENAVNIPS SSSGGAGRGY TRPGPGGSAG LGAGAIVGAA AAFYGRDYLS
301: GGFDLPTSLP LPNFSIPNIS LPNVSIPNGS ISIDPPF

Best Arabidopsis Sequence Match ( AT2G40815.2 )
(BLAST)

001: MGKILVEICM ISARGLRVGI GIGSSLLKHQ WYAVGWLDPE DKYCTTIDAS RADNPVWRTK FATLLDDSTI QDSKLALQVE VYSREPLFLR KRLHGSATVS
101: LKEFLTKYKQ QQSSSKAVIE ETGSYQLRKT NSSKPQGFVD VSIRISAERE DFGGFTGDFG GVMLSNNSDY NTSGQDYMAG SSQYPFAPMD QSNPFSVPPS
201: YNHHSSMPNP PMTNTNPQMQ QPYYPPPMQP PPPPMNSGYM PTYIPNSENV TNIPSSSSSG GVPGGAGRGY ARTGPGFAVG VGAGAVVGAG AALYGSEFMS
301: GIDLPSSLPH PSVPISIDPP F

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4IIZ8]
SUBAcon: [plasma membrane,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.