CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

nucleus 2
extracellular 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	cytosol, extracellular, nucleus
BaCelLo:	nucleus
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22480	Canola	vacuole	50.89	49.78
CDY35439	Canola	extracellular, vacuole	61.61	41.44
CDY35438	Canola	mitochondrion, nucleus, vacuole	62.05	41.25
CDY22482	Canola	mitochondrion	59.82	39.07
Solyc03g095300.2.1	Tomato	mitochondrion	24.55	38.19
AT2G40815.1	Thale cress	extracellular, plasma membrane, plastid	56.7	34.6
VIT_13s0067g00140.t01	Wine grape	extracellular, mitochondrion, nucleus, plasma membrane	38.84	26.93
PGSC0003DMT400013484	Potato	cytosol, golgi, mitochondrion, nucleus	36.61	25.71
KRH16945	Soybean	mitochondrion	35.71	25.56
KRH72560	Soybean	mitochondrion	36.16	25.0
EES01658	Sorghum	mitochondrion	34.38	24.68
TraesCS3D01G335200.1	Wheat	mitochondrion	33.04	23.72
TraesCS3A01G341500.1	Wheat	mitochondrion	33.04	23.72
TraesCS3B01G373600.1	Wheat	mitochondrion	33.04	23.72
Os01t0818100-00	Rice	mitochondrion	32.59	23.55
Zm00001d043082_P001	Maize	nucleus, peroxisome, plastid	32.14	22.86
GSMUA_Achr7P21910_001	Banana	mitochondrion	32.59	22.81
KRH53687	Soybean	plasma membrane	33.48	22.52
KRH64243	Soybean	extracellular, plasma membrane	32.59	21.92

Protein Annotations

EnsemblPlants:CDY22481	EnsemblPlantsGene:GSBRNA2T00019041001	Gene3D:2.60.40.150	InterPro:C2_domain_sf	InterPro:IPR035892	PANTHER:PTHR32246
PANTHER:PTHR32246:SF15	ProteinID:CDY22481	ProteinID:CDY22481.1	SEG:seg	SUPFAM:SSF49562	UniParc:UPI0004EEA467
UniProt:A0A078GAS9	MapMan:35.2	:	:	:	:

Description

BnaC03g22910DBnaC03g22910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAS9]

Coordinates

chrLK032132:-:105441..106273

Molecular Weight (calculated)

24659.7 Da

IEP (calculated)

7.999

GRAVY (calculated)

-0.489

Length

224 amino acids

Sequence
(BLAST)

001: MGETFIEICL ISARGLRIGP GFGCSLLKHQ LHAVGWIDPK NKFCTTVSAS RSDNPHWRTR VITSLDDDDN SMIHALYAEV YSRKPIFLTK KFHGSVFVPL
101: KEFFTKYKNQ KSSSGSVFEE TISCQLTKEN SSKPQGSVNV SIRIAAERQD FEGSAGNEES SISTNSRYNF SGQNDMAGSS QHTFATLNQP NSSNSFSLPP
201: DNHYFPMPNP NATTLLSSST SAAT

Best Arabidopsis Sequence Match ( AT2G40815.1 )
(BLAST)

001: MGKILVEICM ISARGLRVGI GIGSSLLKHQ WYAVGWLDPE DKYCTTIDAS RADNPVWRTK FATLLDDSTI QDSKLALQVE VYSREPLFLR KRLHGSATVS
101: LKEFLTKYKQ QQSSSKAVIE ETGSYQLRKT NSSKPQGFVD VSIRISAERE DFGGFTGDFG GVMLSNNSDY NTSGQDYMAG SSQYPFAPMD QSNPFSVPPS
201: YNHHSSMPNP PMTNTNPQMQ QPYYPPPMQP PPPPMNSGYM PTYIPKSVND SSMPNPPMNN TNPQMQQPYY PPPMQPAPPP MNSGYMPTYI PNSENVTNIP
301: SSSSSGGVPG GAGRGYARTG PGFAVGVGAG AVVGAGAALY GSEFMSGIDL PSSLPHPSVP ISIDPPF

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) family protein [Source:UniProtKB/TrEMBL;Acc:F4IIZ8]
SUBAcon: [plasma membrane,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.