Factsheet for Bra007950.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03712	Canola	cytosol	98.63	98.63
AT1G70870.1	Thale cress	cytosol	80.14	84.17
VIT_01s0011g05120.t01	Wine grape	cytosol	43.84	42.38
VIT_01s0011g05070.t01	Wine grape	cytosol	20.55	40.54
VIT_01s0011g05130.t01	Wine grape	cytosol	40.41	39.07
VIT_01s0011g05110.t01	Wine grape	cytosol	40.41	39.07
Bra016361.1-P	Field mustard	cytosol	34.93	38.64
KRH07297	Soybean	cytosol	36.3	35.1
Bra016363.1-P	Field mustard	cytosol	34.25	34.01
KRH44771	Soybean	cytosol, mitochondrion	34.93	33.55
KRH38207	Soybean	cytosol	34.93	33.33
KRH17964	Soybean	cytosol	33.56	32.03
KRH13141	Soybean	cytosol	32.88	31.58
Bra007946.1-P	Field mustard	cytosol	29.45	31.39
KRH44775	Soybean	cytosol, mitochondrion	32.88	31.37
KRH32895	Soybean	cytosol	32.88	31.37
Bra016180.1-P	Field mustard	cytosol	29.45	31.16
Bra016178.1-P	Field mustard	cytosol	33.56	31.01
KRH44774	Soybean	cytosol	32.19	30.92
KRH13115	Soybean	cytosol	31.51	30.26
Bra016179.1-P	Field mustard	cytosol	29.45	29.25
KRH72121	Soybean	cytosol, vacuole	28.08	29.08
Bra016181.1-P	Field mustard	cytosol	27.4	28.99
Bra003939.1-P	Field mustard	cytosol	31.51	28.22
Bra012361.1-P	Field mustard	cytosol	26.03	27.34
Bra007947.1-P	Field mustard	cytosol	28.77	26.58
Bra016364.1-P	Field mustard	cytosol	28.08	26.11
Bra024564.1-P	Field mustard	cytosol	29.45	23.63
Bra012364.1-P	Field mustard	cytosol	24.66	22.64
Bra016182.1-P	Field mustard	cytosol	32.19	22.6
Bra012362.1-P	Field mustard	cytosol	24.66	22.5
Bra016362.1-P	Field mustard	cytosol	23.29	21.12
Bra012363.1-P	Field mustard	cytosol	22.6	20.5
Bra007945.1-P	Field mustard	cytosol	30.82	19.65
Bra007949.1-P	Field mustard	cytosol	31.51	18.25
Bra002309.1-P	Field mustard	cytosol	16.44	17.78

Protein Annotations

EnsemblPlants:Bra007950.1	EnsemblPlants:Bra007950.1-P	EnsemblPlantsGene:Bra007950	Gene3D:3.30.530.20	GO:GO:0006950	GO:GO:0006952
GO:GO:0008150	GO:GO:0009607	InterPro:Bet_v_I/MLP	InterPro:IPR023393	InterPro:START-like_dom_sf	PANTHER:PTHR31338
PFAM:PF00407	SMART:SM01037	SUPFAM:SSF55961	UniParc:UPI0002546C20	UniProt:M4CUQ5	MapMan:35.1

Description

AT1G70870 (E=5e-055) | major latex protein-related / MLP-related

Coordinates

chrA02:-:12058938..12059471

Molecular Weight (calculated)

16725.1 Da

IEP (calculated)

6.541

GRAVY (calculated)

-0.458

Length

146 amino acids

Sequence
(BLAST)

001: MAQMAKSMIE VEIKVSADKI FQAIKATSRS VPKLSPGKIL SVEEQVGDHT KNWTLSIDGK VEKMKERVEI DEENKSMTVF VFDGDVMENY SSFKCNLQII
101: PKLHGRSIAR WSWEYEKLNS DSPAPNKYMD FAVYLTRDIE SNLLKT

Best Arabidopsis Sequence Match ( AT1G70870.1 )
(BLAST)

001: MAQMAKSMIE VEINVSADMI FGKSFSKLSS LLHEHIGDGC KGTKNWTLSV DGKVEKMKER VEIDEANKSM TVFVFEGDVM ENYSSFTCNL QIIPKLHGRS
101: IARWSWEYEK LNADSPAPNK YMDFAVYLTK DIESNLLKT

Arabidopsis Description

Polyketide cyclase/dehydrase and lipid transport superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6Z0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.