Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007950.1-P | Field mustard | cytosol | 98.63 | 98.63 |
| CDY09498 | Canola | cytosol | 97.26 | 97.26 |
| AT1G70870.1 | Thale cress | cytosol | 79.45 | 83.45 |
| VIT_01s0011g05120.t01 | Wine grape | cytosol | 43.84 | 42.38 |
| VIT_01s0011g05070.t01 | Wine grape | cytosol | 20.55 | 40.54 |
| VIT_01s0011g05130.t01 | Wine grape | cytosol | 40.41 | 39.07 |
| VIT_01s0011g05110.t01 | Wine grape | cytosol | 40.41 | 39.07 |
| CDY41462 | Canola | cytosol | 36.99 | 36.99 |
| CDX91697 | Canola | cytosol | 36.99 | 36.49 |
| KRH07297 | Soybean | cytosol | 36.3 | 35.1 |
| CDY41464 | Canola | cytosol | 34.25 | 34.01 |
| KRH38207 | Soybean | cytosol | 34.93 | 33.33 |
| KRH44771 | Soybean | cytosol, mitochondrion | 34.25 | 32.89 |
| CDX72752 | Canola | cytosol | 30.14 | 31.88 |
| KRH17964 | Soybean | cytosol | 32.88 | 31.37 |
| KRH32895 | Soybean | cytosol | 32.88 | 31.37 |
| KRH13141 | Soybean | cytosol | 32.19 | 30.92 |
| KRH44775 | Soybean | cytosol, mitochondrion | 32.19 | 30.72 |
| KRH44774 | Soybean | cytosol | 31.51 | 30.26 |
| CDX72753 | Canola | cytosol | 32.19 | 29.75 |
| CDY09495 | Canola | cytosol | 32.19 | 29.75 |
| KRH13115 | Soybean | cytosol | 30.82 | 29.61 |
| KRH72121 | Soybean | cytosol, vacuole | 28.08 | 29.08 |
| CDX96283 | Canola | cytosol | 27.4 | 28.99 |
| CDY23474 | Canola | cytosol | 32.19 | 28.83 |
| CDY09499 | Canola | cytosol | 26.71 | 28.47 |
| CDY65619 | Canola | cytosol | 31.51 | 28.05 |
| CDX68328 | Canola | cytosol | 31.51 | 28.05 |
| CDY03715 | Canola | cytosol | 31.51 | 28.05 |
| CDY70076 | Canola | cytosol | 26.71 | 26.9 |
| CDY03713 | Canola | cytosol | 28.08 | 26.62 |
| CDY12485 | Canola | cytosol | 17.81 | 26.26 |
| CDY68859 | Canola | cytosol | 26.03 | 26.21 |
| CDX91696 | Canola | cytosol | 27.4 | 25.48 |
| CDY41465 | Canola | cytosol | 27.4 | 25.48 |
| CDX89696 | Canola | cytosol | 24.66 | 23.84 |
| CDY00801 | Canola | cytosol | 28.77 | 23.73 |
| CDY21418 | Canola | cytosol | 29.45 | 23.63 |
| CDY25772 | Canola | cytosol | 23.97 | 22.01 |
| CDY12484 | Canola | cytosol | 23.97 | 21.88 |
| CDY17433 | Canola | cytosol | 22.6 | 21.85 |
| CDY12480 | Canola | cytosol | 23.97 | 21.74 |
| CDY25771 | Canola | cytosol | 22.6 | 20.75 |
| CDY16542 | Canola | cytosol | 19.18 | 20.74 |
| CDY41463 | Canola | cytosol | 22.6 | 20.5 |
| CDY09492 | Canola | cytosol | 30.82 | 19.65 |
| CDY03718 | Canola | cytosol | 30.82 | 19.65 |
| CDX92456 | Canola | cytosol | 17.81 | 19.26 |
| CDY12482 | Canola | cytosol | 16.44 | 19.2 |
| CDX96282 | Canola | cytosol | 15.07 | 18.03 |
| CDY11541 | Canola | cytosol | 14.38 | 13.55 |
Protein Annotations
| EnsemblPlants:CDY03712 | EnsemblPlantsGene:GSBRNA2T00116518001 | Gene3D:3.30.530.20 | GO:A0A078ERN9 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31338 |
| PFAM:PF00407 | ProteinID:CDY03712 | ProteinID:CDY03712.1 | SMART:SM01037 | SUPFAM:SSF55961 | UniParc:UPI0004EE0322 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA02g15250D
Coordinates
chrLK031945:+:707412..708131
Molecular Weight (calculated)
16702.1 Da
IEP (calculated)
5.990
GRAVY (calculated)
-0.460
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQMAKSMIE VEIKVSADKI FQAIKATSRS VPKLSPGKIL SVEEQVGDDT KNWTLSINGK VEKMKERVEI DEENKSMTVF VFDGDVMENY SSFKCNLQII
101: PKLHGRSIAR WSWEYEKLNS DSPAPNKYMD FAVYLTRDIE SNLLKT
101: PKLHGRSIAR WSWEYEKLNS DSPAPNKYMD FAVYLTRDIE SNLLKT
001: MAQMAKSMIE VEINVSADMI FGKSFSKLSS LLHEHIGDGC KGTKNWTLSV DGKVEKMKER VEIDEANKSM TVFVFEGDVM ENYSSFTCNL QIIPKLHGRS
101: IARWSWEYEK LNADSPAPNK YMDFAVYLTK DIESNLLKT
101: IARWSWEYEK LNADSPAPNK YMDFAVYLTK DIESNLLKT
Arabidopsis Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6Z0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.