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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY41465 Canola cytosol 92.36 92.36
CDY12485 Canola cytosol 53.5 84.85
AT5G28010.2 Thale cress cytosol 80.25 75.9
CDY12484 Canola cytosol 76.43 75.0
CDY03715 Canola cytosol 68.15 65.24
AT5G28000.1 Thale cress cytosol 67.52 64.63
CDY65619 Canola cytosol 67.52 64.63
CDY09495 Canola cytosol 64.97 64.56
CDX68328 Canola cytosol 66.88 64.02
CDY23474 Canola cytosol 65.61 63.19
CDY09499 Canola cytosol 51.59 59.12
CDY12480 Canola cytosol 59.87 58.39
CDY41463 Canola cytosol 59.24 57.76
CDX72752 Canola cytosol 49.68 56.52
CDX96283 Canola cytosol 49.04 55.8
CDY25772 Canola cytosol 55.41 54.72
CDX72753 Canola cytosol 53.5 53.16
CDY12482 Canola cytosol 42.04 52.8
CDX89696 Canola cytosol 50.32 52.32
CDY21418 Canola cytosol 60.51 52.2
CDY17433 Canola cytosol 49.04 50.99
CDY03713 Canola cytosol 49.68 50.65
CDY00801 Canola cytosol 56.69 50.28
CDY25771 Canola cytosol 50.32 49.69
VIT_01s0011g05170.t01 Wine grape cytosol 19.75 48.44
CDY70076 Canola cytosol 44.59 48.28
VIT_01s0011g05190.t01 Wine grape cytosol 44.59 46.36
CDY03718 Canola cytosol 65.61 44.98
CDY68859 Canola cytosol 41.4 44.83
CDY09492 Canola cytosol 64.33 44.1
CDY16542 Canola cytosol 36.31 42.22
Solyc05g046160.1.1 Tomato cytosol 17.2 42.19
VIT_01s0011g05150.t01 Wine grape cytosol 36.94 42.03
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 40.13 42.0
KRH13947 Soybean cytosol 40.76 41.29
Solyc04g007830.2.1 Tomato cytosol 35.03 41.04
CDX92456 Canola cytosol 35.03 40.74
KRH37979 Soybean cytosol 38.85 39.35
VIT_01s0011g05180.t01 Wine grape cytosol 37.58 39.07
PGSC0003DMT400075925 Potato cytosol 28.66 38.79
KRH13946 Soybean cytosol 37.58 38.06
PGSC0003DMT400077743 Potato cytosol 36.31 37.75
PGSC0003DMT400022679 Potato cytosol 36.31 37.75
PGSC0003DMT400031386 Potato cytosol 36.31 37.75
CDX96282 Canola cytosol 29.3 37.7
PGSC0003DMT400056811 Potato cytosol 30.57 37.21
Solyc09g005500.2.1 Tomato extracellular 35.67 37.09
PGSC0003DMT400041455 Potato cytosol 35.67 37.09
PGSC0003DMT400073916 Potato cytosol 28.03 36.67
Solyc05g046150.2.1 Tomato cytosol, extracellular 34.39 36.0
PGSC0003DMT400031542 Potato cytosol 35.03 35.95
Solyc05g046220.1.1 Tomato cytosol 21.66 35.42
PGSC0003DMT400022721 Potato cytosol 34.39 35.29
PGSC0003DMT400073915 Potato cytosol 34.39 35.29
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 35.67 35.22
Solyc01g081130.2.1 Tomato cytosol 16.56 34.21
Solyc09g014530.2.1 Tomato cytosol, extracellular 32.48 34.0
PGSC0003DMT400021866 Potato cytosol 32.48 33.55
Solyc09g014580.2.1 Tomato cytosol 31.85 32.89
PGSC0003DMT400021868 Potato cytosol 31.21 32.67
Solyc09g005420.2.1 Tomato cytosol 31.21 32.67
PGSC0003DMT400025429 Potato cytosol 31.21 32.67
CDY41464 Canola cytosol 30.57 32.65
PGSC0003DMT400041449 Potato cytosol 23.57 32.46
Solyc09g014550.2.1 Tomato cytosol 31.21 32.24
PGSC0003DMT400021867 Potato cytosol 31.21 32.24
CDY41462 Canola cytosol 29.94 32.19
PGSC0003DMT400025419 Potato cytosol 26.75 31.82
CDX91697 Canola cytosol 29.94 31.76
Solyc09g005410.1.1 Tomato cytosol 27.39 31.62
KRH13944 Soybean cytosol 28.03 31.43
Solyc09g005400.2.1 Tomato cytosol 29.94 31.33
Solyc09g014560.1.1 Tomato cytosol 14.65 31.08
PGSC0003DMT400025420 Potato cytosol 29.3 30.46
PGSC0003DMT400004549 Potato cytosol 29.3 30.26
PGSC0003DMT400091938 Potato cytosol 29.3 29.68
PGSC0003DMT400059724 Potato cytosol 40.76 29.63
PGSC0003DMT400041446 Potato cytosol 28.03 29.33
CDY11541 Canola cytosol 28.66 29.03
CDY09498 Canola cytosol 26.75 28.77
Solyc09g014540.1.1 Tomato cytosol 18.47 28.71
CDY03712 Canola cytosol 25.48 27.4
PGSC0003DMT400044158 Potato cytosol 22.29 24.31
PGSC0003DMT400020053 Potato cytosol 39.49 20.95
PGSC0003DMT400075928 Potato cytosol 38.85 20.54
Protein Annotations
EnsemblPlants:CDX91696EnsemblPlantsGene:GSBRNA2T00153183001Gene3D:3.30.530.20GO:A0A078DQX5GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PANTHER:PTHR31907:SF4PFAM:PF00407ProteinID:CDX91696ProteinID:CDX91696.1SEG:segSMART:SM01037
SUPFAM:SSF55961UniParc:UPI0004EE19AAMapMan:35.1:::
Description
BnaC08g06150D
Coordinates
chrLK031869:+:279979..280821
Molecular Weight (calculated)
18109.5 Da
IEP (calculated)
4.839
GRAVY (calculated)
-0.419
Length
157 amino acids
Sequence
(BLAST)
001: MTQSSLLGEL EVEVEIKSPA EKFYHMYAGR PHHVAKSTPR NVQACDLHDG EWGEVGSIIF WNYVHDGQAR VAKERIEVVE PEKKIVKFRV LEGDLMEEFK
101: SFVITIQVTP KQGGNGSIVK WHFEYEKIDE NISHPETLLP FFADMIKEID EHLLSEE
Best Arabidopsis Sequence Match ( AT5G28010.2 )
(BLAST)
001: MAEKVEVTTM PKSSLLGKLE VEVEIKAPAA IFYHIYAGRP HHVAKATPRN VQSCDLHDGE WGTVGSIVYW NYVHEGQAKV AKERIELVEP EKKLIKFRVI
101: EGDVMAEYKS FLITIQVTPK EGGTGSVVKW HIEYEKIDEN VPHPENLLPF FAEMTKEIDE HLLSEE
Arabidopsis Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K5S5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.