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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 3
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400030176
PGSC0003DMT400030222
PGSC0003DMT400055428

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70830.1 PGSC0003DMT400030176 AT5G43080.1 20706207
AT1G70830.1 PGSC0003DMT400030222 AT5G43080.1 20706207
AT1G70830.1 PGSC0003DMT400055428 AT5G43080.1 20706207
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400022679 Potato cytosol 97.35 97.35
PGSC0003DMT400077743 Potato cytosol 94.04 94.04
PGSC0003DMT400056811 Potato cytosol 77.48 90.7
PGSC0003DMT400091938 Potato cytosol 69.54 67.74
PGSC0003DMT400044158 Potato cytosol 58.28 61.11
VIT_01s0011g05170.t01 Wine grape cytosol 22.52 53.12
PGSC0003DMT400075925 Potato cytosol 37.09 48.28
PGSC0003DMT400021868 Potato cytosol 46.36 46.67
PGSC0003DMT400031542 Potato cytosol 46.36 45.75
PGSC0003DMT400031386 Potato cytosol 45.7 45.7
VIT_01s0011g05190.t01 Wine grape cytosol 45.7 45.7
PGSC0003DMT400021866 Potato cytosol 45.7 45.39
PGSC0003DMT400025429 Potato cytosol 45.03 45.33
PGSC0003DMT400073915 Potato cytosol 45.7 45.1
VIT_01s0011g05180.t01 Wine grape cytosol 45.03 45.03
PGSC0003DMT400022721 Potato cytosol 45.03 44.44
PGSC0003DMT400004549 Potato cytosol 44.37 44.08
VIT_01s0011g05150.t01 Wine grape cytosol 39.74 43.48
PGSC0003DMT400073916 Potato cytosol 34.44 43.33
PGSC0003DMT400025420 Potato cytosol 43.05 43.05
PGSC0003DMT400041446 Potato cytosol 42.38 42.67
PGSC0003DMT400041449 Potato cytosol 31.79 42.11
PGSC0003DMT400021867 Potato cytosol 41.72 41.45
PGSC0003DMT400025419 Potato cytosol 35.76 40.91
Bra007947.1-P Field mustard cytosol 41.72 39.87
CDY09499 Canola cytosol 35.1 38.69
AT1G70890.1 Thale cress cytosol 40.4 38.61
CDY09495 Canola cytosol 39.74 37.97
CDY03715 Canola cytosol 41.06 37.8
CDY65619 Canola cytosol 41.06 37.8
CDY41465 Canola cytosol 39.07 37.58
Bra016364.1-P Field mustard cytosol 39.07 37.58
CDY12485 Canola cytosol 24.5 37.37
CDY03713 Canola cytosol 37.75 37.01
Bra003939.1-P Field mustard cytosol 39.74 36.81
CDX68328 Canola cytosol 39.74 36.59
CDY23474 Canola cytosol 39.07 36.2
AT5G28010.2 Thale cress cytosol 39.74 36.14
AT1G70860.2 Thale cress cytosol 17.88 36.0
CDX91696 Canola cytosol 37.09 35.67
Bra012362.1-P Field mustard cytosol 37.75 35.62
KRH37979 Soybean cytosol 36.42 35.48
AT1G70840.1 Thale cress cytosol 39.74 35.09
Bra007946.1-P Field mustard cytosol 31.79 35.04
Bra016179.1-P Field mustard cytosol 33.77 34.69
CDY12484 Canola cytosol 36.42 34.38
AT1G70880.1 Thale cress cytosol 35.76 33.96
KRH13947 Soybean cytosol 34.44 33.55
AT5G28000.1 Thale cress cytosol 35.76 32.93
Bra016178.1-P Field mustard cytosol 34.44 32.91
PGSC0003DMT400059724 Potato cytosol 47.02 32.87
CDX72753 Canola cytosol 33.77 32.28
Bra016180.1-P Field mustard cytosol 28.48 31.16
KRH13946 Soybean cytosol 31.79 30.97
AT1G23130.1 Thale cress cytosol 32.45 30.62
CDX89696 Canola cytosol 30.46 30.46
CDX72752 Canola cytosol 27.81 30.43
Bra016182.1-P Field mustard cytosol 41.72 30.29
CDY00801 Canola cytosol 35.1 29.94
CDY17433 Canola cytosol 29.8 29.8
Bra016181.1-P Field mustard cytosol 27.15 29.71
CDX96283 Canola cytosol 27.15 29.71
CDY70076 Canola cytosol 28.48 29.66
CDY21418 Canola cytosol 35.1 29.12
Bra024564.1-P Field mustard cytosol 35.1 29.12
Bra012361.1-P Field mustard cytosol 26.49 28.78
AT1G35260.1 Thale cress cytosol 28.48 28.29
Bra002309.1-P Field mustard cytosol 25.17 28.15
CDY16542 Canola cytosol 25.17 28.15
CDX92456 Canola cytosol 24.5 27.41
CDY12480 Canola cytosol 29.14 27.33
CDY12482 Canola cytosol 22.52 27.2
AT1G35310.1 Thale cress cytosol 27.15 27.15
CDY09492 Canola cytosol 41.06 27.07
CDY03718 Canola cytosol 41.06 27.07
Bra007945.1-P Field mustard cytosol 41.06 27.07
CDY25771 Canola cytosol 28.48 27.04
CDY41463 Canola cytosol 28.48 26.71
Bra016362.1-P Field mustard cytosol 28.48 26.71
Bra012363.1-P Field mustard cytosol 28.48 26.71
CDY25772 Canola cytosol 27.81 26.42
Bra012364.1-P Field mustard cytosol 27.81 26.42
CDY68859 Canola cytosol 25.17 26.21
KRH13944 Soybean cytosol 23.84 25.71
CDX96282 Canola cytosol 20.53 25.41
PGSC0003DMT400020053 Potato cytosol 47.68 24.32
PGSC0003DMT400075928 Potato cytosol 47.02 23.91
CDY11541 Canola cytosol 21.85 21.29
Bra007949.1-P Field mustard cytosol 35.1 21.03
AT1G70850.1 Thale cress cytosol 43.05 20.57
AT1G70830.1 Thale cress cytosol 40.4 18.21
Protein Annotations
EnsemblPlants:PGSC0003DMT400041455EnsemblPlantsGene:PGSC0003DMG400016068Gene3D:3.30.530.20GO:GO:0006950GO:GO:0006952GO:GO:0008150
GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907PANTHER:PTHR31907:SF4
PFAM:PF00407PGSC:PGSC0003DMG400016068SMART:SM01037SUPFAM:SSF55961UniParc:UPI000295B4F3UniProt:M1BBE8
MapMan:35.1:::::
Description
Major latex [Source:PGSC_GENE;Acc:PGSC0003DMG400016068]
Coordinates
chr00:-:25712002..25713614
Molecular Weight (calculated)
17388.6 Da
IEP (calculated)
4.788
GRAVY (calculated)
-0.485
Length
151 amino acids
Sequence
(BLAST)
001: MGLKGKLISE TEIKGCKDLF HEMFCEKPHH LPNVVPQTIQ AVDLHEGDWG TIGSVVNWNY TIEGDEKVVK VIIDEINKEK RLVTFKAFEG HLIEEYKAFK
101: ATIHIENEGD NNLAIWTIEY EKQNEDIPEP FSYLQLATNL TKDVDTHHVN Q
Best Arabidopsis Sequence Match ( AT1G70830.5 )
(BLAST)
001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEE
Arabidopsis Description
MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.