Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G28010.2 | Thale cress | cytosol | 75.61 | 74.7 |
| CDY12485 | Canola | cytosol | 42.68 | 70.71 |
| CDY41465 | Canola | cytosol | 64.63 | 67.52 |
| CDX91696 | Canola | cytosol | 64.63 | 67.52 |
| Bra016364.1-P | Field mustard | cytosol | 64.02 | 66.88 |
| CDY12484 | Canola | cytosol | 62.8 | 64.38 |
| Bra012362.1-P | Field mustard | cytosol | 61.59 | 63.12 |
| AT1G70840.1 | Thale cress | cytosol | 60.37 | 57.89 |
| Bra012361.1-P | Field mustard | cytosol | 47.56 | 56.12 |
| AT1G70890.1 | Thale cress | cytosol | 53.05 | 55.06 |
| AT1G70880.1 | Thale cress | cytosol | 51.22 | 52.83 |
| AT1G23130.1 | Thale cress | cytosol | 48.17 | 49.38 |
| AT1G35260.1 | Thale cress | cytosol | 45.12 | 48.68 |
| AT1G70860.2 | Thale cress | cytosol | 21.95 | 48.0 |
| AT1G35310.1 | Thale cress | cytosol | 43.9 | 47.68 |
| Solyc04g007830.2.1 | Tomato | cytosol | 35.98 | 44.03 |
| Solyc05g046160.1.1 | Tomato | cytosol | 17.07 | 43.75 |
| VIT_01s0011g05170.t01 | Wine grape | cytosol | 16.46 | 42.19 |
| PGSC0003DMT400075925 | Potato | cytosol | 29.27 | 41.38 |
| Solyc05g046140.2.1 | Tomato | endoplasmic reticulum, extracellular | 37.8 | 41.33 |
| KRH13947 | Soybean | cytosol | 39.02 | 41.29 |
| VIT_01s0011g05190.t01 | Wine grape | cytosol | 36.59 | 39.74 |
| Solyc05g046220.1.1 | Tomato | cytosol | 23.17 | 39.58 |
| KRH13946 | Soybean | cytosol | 37.2 | 39.35 |
| PGSC0003DMT400073916 | Potato | cytosol | 28.66 | 39.17 |
| PGSC0003DMT400031386 | Potato | cytosol | 35.98 | 39.07 |
| VIT_01s0011g05150.t01 | Wine grape | cytosol | 31.71 | 37.68 |
| KRH37979 | Soybean | cytosol | 35.37 | 37.42 |
| Solyc05g046150.2.1 | Tomato | cytosol, extracellular | 34.15 | 37.33 |
| VIT_01s0011g05180.t01 | Wine grape | cytosol | 34.15 | 37.09 |
| PGSC0003DMT400041455 | Potato | cytosol | 32.93 | 35.76 |
| Solyc09g014540.1.1 | Tomato | cytosol | 21.95 | 35.64 |
| PGSC0003DMT400056811 | Potato | cytosol | 27.44 | 34.88 |
| PGSC0003DMT400021866 | Potato | cytosol | 32.32 | 34.87 |
| Solyc09g014580.2.1 | Tomato | cytosol | 31.71 | 34.21 |
| Solyc01g081130.2.1 | Tomato | cytosol | 15.85 | 34.21 |
| PGSC0003DMT400031542 | Potato | cytosol | 31.71 | 33.99 |
| PGSC0003DMT400022679 | Potato | cytosol | 31.1 | 33.77 |
| PGSC0003DMT400025419 | Potato | cytosol | 26.83 | 33.33 |
| Solyc09g014530.2.1 | Tomato | cytosol, extracellular | 30.49 | 33.33 |
| PGSC0003DMT400073915 | Potato | cytosol | 31.1 | 33.33 |
| PGSC0003DMT400077743 | Potato | cytosol | 30.49 | 33.11 |
| PGSC0003DMT400004549 | Potato | cytosol | 30.49 | 32.89 |
| Solyc07g008710.2.1 | Tomato | cytosol, extracellular, nucleus | 31.71 | 32.7 |
| PGSC0003DMT400022721 | Potato | cytosol | 30.49 | 32.68 |
| PGSC0003DMT400021868 | Potato | cytosol | 29.88 | 32.67 |
| Solyc09g005500.2.1 | Tomato | extracellular | 29.88 | 32.45 |
| Solyc09g005410.1.1 | Tomato | cytosol | 26.83 | 32.35 |
| Solyc09g014550.2.1 | Tomato | cytosol | 29.88 | 32.24 |
| PGSC0003DMT400025429 | Potato | cytosol | 29.27 | 32.0 |
| PGSC0003DMT400021867 | Potato | cytosol | 29.27 | 31.58 |
| Solyc09g005400.2.1 | Tomato | cytosol | 28.66 | 31.33 |
| PGSC0003DMT400041449 | Potato | cytosol | 21.34 | 30.7 |
| Solyc09g005420.2.1 | Tomato | cytosol | 28.05 | 30.67 |
| PGSC0003DMT400025420 | Potato | cytosol | 28.05 | 30.46 |
| AT1G70850.1 | Thale cress | cytosol | 57.93 | 30.06 |
| PGSC0003DMT400041446 | Potato | cytosol | 26.83 | 29.33 |
| KRH13944 | Soybean | cytosol | 25.0 | 29.29 |
| PGSC0003DMT400059724 | Potato | cytosol | 38.41 | 29.17 |
| AT1G70870.1 | Thale cress | cytosol | 23.78 | 28.06 |
| AT1G70830.1 | Thale cress | cytosol | 55.49 | 27.16 |
| Solyc09g014560.1.1 | Tomato | cytosol | 12.2 | 27.03 |
| PGSC0003DMT400091938 | Potato | cytosol | 23.78 | 25.16 |
| AT1G23120.2 | Thale cress | vacuole | 29.27 | 24.24 |
| PGSC0003DMT400044158 | Potato | cytosol | 19.51 | 22.22 |
| PGSC0003DMT400075928 | Potato | cytosol | 37.8 | 20.88 |
| PGSC0003DMT400020053 | Potato | cytosol | 37.2 | 20.61 |
Protein Annotations
| Gene3D:3.30.530.20 | MapMan:35.1 | EntrezGene:832870 | ProteinID:AED93757.1 | ArrayExpress:AT5G28000 | EnsemblPlantsGene:AT5G28000 |
| RefSeq:AT5G28000 | TAIR:AT5G28000 | RefSeq:AT5G28000-TAIR-G | EnsemblPlants:AT5G28000.1 | TAIR:AT5G28000.1 | InterPro:Bet_v_I/MLP |
| ProteinID:CAC83584.1 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0009607 | InterPro:IPR023393 |
| RefSeq:NP_198152.1 | PFAM:PF00407 | PANTHER:PTHR31907 | PANTHER:PTHR31907:SF4 | UniProt:Q941R5 | SMART:SM01037 |
| SUPFAM:SSF55961 | InterPro:START-like_dom_sf | UniParc:UPI000009FFDA | : | : | : |
Description
Major latex-like protein [Source:UniProtKB/TrEMBL;Acc:Q941R5]
Coordinates
chr5:+:10020653..10021430
Molecular Weight (calculated)
18566.1 Da
IEP (calculated)
4.644
GRAVY (calculated)
-0.321
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MAETTKEMPK SSLWGEVEVE VDIKSPAEKF YQVYVGRPDH VAKATSSKVQ ACDLLEGEWG TISSIVNWNY VYAGKAKVAK ERIELVEPEK KLIKFRVIEG
101: DVLAVYKNFF ITISVTPKEG GVGSVAKWHL EYEKNDVNVP DPENFLPFLA EMTKEIDEHL LSEE
101: DVLAVYKNFF ITISVTPKEG GVGSVAKWHL EYEKNDVNVP DPENFLPFLA EMTKEIDEHL LSEE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.