Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0011g05170.t01 | Wine grape | cytosol | 36.0 | 42.19 |
| AT1G70880.1 | Thale cress | cytosol | 72.0 | 33.96 |
| Bra002309.1-P | Field mustard | cytosol | 57.33 | 31.85 |
| CDX92456 | Canola | cytosol | 54.67 | 30.37 |
| CDY16542 | Canola | cytosol | 53.33 | 29.63 |
| Solyc09g014560.1.1 | Tomato | cytosol | 28.0 | 28.38 |
| AT1G70840.1 | Thale cress | cytosol | 62.67 | 27.49 |
| AT1G70890.1 | Thale cress | cytosol | 56.0 | 26.58 |
| Solyc01g081130.2.1 | Tomato | cytosol | 24.0 | 23.68 |
| PGSC0003DMT400041449 | Potato | cytosol | 36.0 | 23.68 |
| AT1G23130.1 | Thale cress | cytosol | 48.0 | 22.5 |
| AT5G28010.2 | Thale cress | cytosol | 49.33 | 22.29 |
| AT5G28000.1 | Thale cress | cytosol | 48.0 | 21.95 |
| VIT_01s0011g05190.t01 | Wine grape | cytosol | 41.33 | 20.53 |
| VIT_01s0011g05180.t01 | Wine grape | cytosol | 41.33 | 20.53 |
| AT1G35310.1 | Thale cress | cytosol | 41.33 | 20.53 |
| PGSC0003DMT400025429 | Potato | cytosol | 40.0 | 20.0 |
| AT1G35260.1 | Thale cress | cytosol | 38.67 | 19.08 |
| VIT_01s0011g05150.t01 | Wine grape | cytosol | 34.67 | 18.84 |
| KRH37979 | Soybean | cytosol | 38.67 | 18.71 |
| Solyc09g005400.2.1 | Tomato | cytosol | 37.33 | 18.67 |
| PGSC0003DMT400021868 | Potato | cytosol | 37.33 | 18.67 |
| Solyc05g046140.2.1 | Tomato | endoplasmic reticulum, extracellular | 37.33 | 18.67 |
| PGSC0003DMT400077743 | Potato | cytosol | 37.33 | 18.54 |
| PGSC0003DMT400041455 | Potato | cytosol | 36.0 | 17.88 |
| PGSC0003DMT400022679 | Potato | cytosol | 36.0 | 17.88 |
| KRH13944 | Soybean | cytosol | 33.33 | 17.86 |
| PGSC0003DMT400021867 | Potato | cytosol | 36.0 | 17.76 |
| Solyc09g014550.2.1 | Tomato | cytosol | 36.0 | 17.76 |
| PGSC0003DMT400022721 | Potato | cytosol | 36.0 | 17.65 |
| PGSC0003DMT400073915 | Potato | cytosol | 36.0 | 17.65 |
| PGSC0003DMT400041446 | Potato | cytosol | 34.67 | 17.33 |
| Solyc09g005420.2.1 | Tomato | cytosol | 34.67 | 17.33 |
| Solyc09g014530.2.1 | Tomato | cytosol, extracellular | 34.67 | 17.33 |
| Solyc09g005500.2.1 | Tomato | extracellular | 34.67 | 17.22 |
| PGSC0003DMT400056811 | Potato | cytosol | 29.33 | 17.05 |
| PGSC0003DMT400031542 | Potato | cytosol | 34.67 | 16.99 |
| Solyc07g008710.2.1 | Tomato | cytosol, extracellular, nucleus | 36.0 | 16.98 |
| PGSC0003DMT400025419 | Potato | cytosol | 29.33 | 16.67 |
| PGSC0003DMT400025420 | Potato | cytosol | 33.33 | 16.56 |
| Solyc09g014580.2.1 | Tomato | cytosol | 33.33 | 16.45 |
| PGSC0003DMT400021866 | Potato | cytosol | 33.33 | 16.45 |
| PGSC0003DMT400004549 | Potato | cytosol | 32.0 | 15.79 |
| KRH13947 | Soybean | cytosol | 32.0 | 15.48 |
| PGSC0003DMT400091938 | Potato | cytosol | 32.0 | 15.48 |
| Solyc09g005410.1.1 | Tomato | cytosol | 28.0 | 15.44 |
| AT1G70830.1 | Thale cress | cytosol | 65.33 | 14.63 |
| PGSC0003DMT400031386 | Potato | cytosol | 29.33 | 14.57 |
| KRH13946 | Soybean | cytosol | 29.33 | 14.19 |
| Solyc04g007830.2.1 | Tomato | cytosol | 25.33 | 14.18 |
| Solyc05g046150.2.1 | Tomato | cytosol, extracellular | 28.0 | 14.0 |
| AT1G70850.1 | Thale cress | cytosol | 58.67 | 13.92 |
| PGSC0003DMT400059724 | Potato | cytosol | 38.67 | 13.43 |
| PGSC0003DMT400073916 | Potato | cytosol | 20.0 | 12.5 |
| PGSC0003DMT400075925 | Potato | cytosol | 18.67 | 12.07 |
| PGSC0003DMT400020053 | Potato | cytosol | 38.67 | 9.8 |
| PGSC0003DMT400075928 | Potato | cytosol | 38.67 | 9.76 |
| PGSC0003DMT400044158 | Potato | cytosol | 14.67 | 7.64 |
| AT1G23120.2 | Thale cress | vacuole | 20.0 | 7.58 |
| AT1G70870.1 | Thale cress | cytosol | 13.33 | 7.19 |
| Solyc09g014540.1.1 | Tomato | cytosol | 5.33 | 3.96 |
| Solyc05g046220.1.1 | Tomato | cytosol | 2.67 | 2.08 |
| Solyc05g046160.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.30.530.20 | MapMan:35.1 | EntrezGene:3767685 | ProteinID:AEE35131.1 | ArrayExpress:AT1G70860 | EnsemblPlantsGene:AT1G70860 |
| RefSeq:AT1G70860 | TAIR:AT1G70860 | RefSeq:AT1G70860-TAIR-G | EnsemblPlants:AT1G70860.2 | TAIR:AT1G70860.2 | InterPro:Bet_v_I/MLP |
| ProteinID:CAC83597.1 | GO:GO:0003674 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0009607 |
| InterPro:IPR023393 | RefSeq:NP_001185368.1 | PFAM:PF00407 | PANTHER:PTHR31907 | PANTHER:PTHR31907:SF4 | UniProt:Q941R8 |
| SMART:SM01037 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | UniParc:UPI00000AB81A | : | : |
Description
Major latex-like protein [Source:UniProtKB/TrEMBL;Acc:Q941R8]
Coordinates
chr1:-:26718070..26719211
Molecular Weight (calculated)
8293.8 Da
IEP (calculated)
4.528
GRAVY (calculated)
-0.175
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MAEEVSTLVG ILETTVDLKS STEKFHDMFV GRPHNISDVS PSNFQGCELH EGEMGQVGAI LFWNYVHDGE AKVVK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.