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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002309.1-P Field mustard cytosol 94.81 94.81
CDY16542 Canola cytosol 94.07 94.07
AT1G70860.2 Thale cress cytosol 30.37 54.67
CDX72752 Canola cytosol 48.89 47.83
CDX96283 Canola cytosol 48.15 47.1
CDY03715 Canola cytosol 49.63 40.85
CDY09495 Canola cytosol 47.41 40.51
CDY65619 Canola cytosol 48.89 40.24
CDY23474 Canola cytosol 47.41 39.26
CDX68328 Canola cytosol 47.41 39.02
CDX72753 Canola cytosol 42.22 36.08
CDY41465 Canola cytosol 41.48 35.67
CDX91696 Canola cytosol 40.74 35.03
CDY17433 Canola cytosol 38.52 34.44
CDY12480 Canola cytosol 40.0 33.54
CDX89696 Canola cytosol 37.04 33.11
CDY41463 Canola cytosol 39.26 32.92
CDY12484 Canola cytosol 38.52 32.5
CDY12485 Canola cytosol 23.7 32.32
CDY25772 Canola cytosol 37.04 31.45
CDY09499 Canola cytosol 31.85 31.39
CDY21418 Canola cytosol 42.22 31.32
VIT_01s0011g05170.t01 Wine grape cytosol 14.81 31.25
Solyc09g014560.1.1 Tomato cytosol 16.3 29.73
KRH37979 Soybean cytosol 34.07 29.68
CDY12482 Canola cytosol 27.41 29.6
CDY25771 Canola cytosol 34.81 29.56
CDY00801 Canola cytosol 38.52 29.38
VIT_01s0011g05150.t01 Wine grape cytosol 28.89 28.26
CDY03718 Canola cytosol 47.41 27.95
Solyc01g081130.2.1 Tomato cytosol 15.56 27.63
CDY68859 Canola cytosol 29.63 27.59
CDY09492 Canola cytosol 46.67 27.51
KRH13947 Soybean cytosol 31.11 27.1
CDY70076 Canola cytosol 28.89 26.9
PGSC0003DMT400022721 Potato cytosol 30.37 26.8
PGSC0003DMT400073915 Potato cytosol 30.37 26.8
Solyc09g005410.1.1 Tomato cytosol 26.67 26.47
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 31.11 26.42
PGSC0003DMT400073916 Potato cytosol 22.96 25.83
KRH13946 Soybean cytosol 29.63 25.81
Solyc09g014550.2.1 Tomato cytosol 28.89 25.66
PGSC0003DMT400031542 Potato cytosol 28.89 25.49
Solyc09g005420.2.1 Tomato cytosol 28.15 25.33
Solyc09g014530.2.1 Tomato cytosol, extracellular 28.15 25.33
VIT_01s0011g05190.t01 Wine grape cytosol 28.15 25.17
PGSC0003DMT400025419 Potato cytosol 24.44 25.0
PGSC0003DMT400021867 Potato cytosol 28.15 25.0
Solyc09g014580.2.1 Tomato cytosol 28.15 25.0
PGSC0003DMT400056811 Potato cytosol 23.7 24.81
CDY03713 Canola cytosol 28.15 24.68
PGSC0003DMT400021868 Potato cytosol 27.41 24.67
PGSC0003DMT400025429 Potato cytosol 27.41 24.67
CDX96282 Canola cytosol 22.22 24.59
PGSC0003DMT400025420 Potato cytosol 27.41 24.5
PGSC0003DMT400041455 Potato cytosol 27.41 24.5
PGSC0003DMT400022679 Potato cytosol 27.41 24.5
PGSC0003DMT400077743 Potato cytosol 27.41 24.5
PGSC0003DMT400021866 Potato cytosol 27.41 24.34
VIT_01s0011g05180.t01 Wine grape cytosol 26.67 23.84
PGSC0003DMT400004549 Potato cytosol 26.67 23.68
Solyc05g046160.1.1 Tomato cytosol 11.11 23.44
PGSC0003DMT400041446 Potato cytosol 25.93 23.33
Solyc09g005400.2.1 Tomato cytosol 25.19 22.67
Solyc09g005500.2.1 Tomato extracellular 25.19 22.52
PGSC0003DMT400031386 Potato cytosol 24.44 21.85
PGSC0003DMT400041449 Potato cytosol 17.78 21.05
KRH13944 Soybean cytosol 21.48 20.71
PGSC0003DMT400075925 Potato cytosol 17.78 20.69
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 22.22 20.0
PGSC0003DMT400091938 Potato cytosol 21.48 18.71
CDY11541 Canola cytosol 20.74 18.06
Solyc05g046150.2.1 Tomato cytosol, extracellular 20.0 18.0
Solyc04g007830.2.1 Tomato cytosol 17.78 17.91
CDY03712 Canola cytosol 19.26 17.81
CDY09498 Canola cytosol 18.52 17.12
Solyc05g046220.1.1 Tomato cytosol 11.85 16.67
CDY41462 Canola cytosol 17.78 16.44
CDX91697 Canola cytosol 17.78 16.22
PGSC0003DMT400059724 Potato cytosol 25.19 15.74
CDY41464 Canola cytosol 17.04 15.65
PGSC0003DMT400044158 Potato cytosol 16.3 15.28
Solyc09g014540.1.1 Tomato cytosol 10.37 13.86
PGSC0003DMT400020053 Potato cytosol 24.44 11.15
PGSC0003DMT400075928 Potato cytosol 24.44 11.11
Protein Annotations
EnsemblPlants:CDX92456EnsemblPlantsGene:GSBRNA2T00154226001Gene3D:3.30.530.20GO:A0A078DT56GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PANTHER:PTHR31907:SF4PFAM:PF00407ProteinID:CDX92456ProteinID:CDX92456.1SEG:segSMART:SM01037
SUPFAM:SSF55961UniParc:UPI0004EEA59BMapMan:35.1:::
Description
BnaA10g14950D
Coordinates
chrLK031872:+:748252..748953
Molecular Weight (calculated)
15089.8 Da
IEP (calculated)
4.991
GRAVY (calculated)
-0.449
Length
135 amino acids
Sequence
(BLAST)
001: MARILETTVE LKSSPGKFLD MFVGKQQFEI SSVCPSYVEG CELREGEMGQ VGSIVVWRYV HGKRGGKNDN GDDRLNRSGE QPGDVQVTSK EGDVGSVAHW
101: HFQYVKINEK VADPESLLQF AVEVSKEIDA HLFSW
Best Arabidopsis Sequence Match ( AT1G70880.1 )
(BLAST)
001: MAEEASSLVG IVETTVELKS SVEKFHDLLV GRPHHMSNAT PSNIQSAELQ EGEMGQVGAV ILWNYVHDGE AKSAKQRIES LDPEKNRITY RVVEGDLLKE
101: YTSFVTTFQV TPKEGEPGSV AHWHFEYEKI NEEVAHPETL LQLATEVSKD MDEHLLSEE
Arabidopsis Description
Major latex-like protein [Source:UniProtKB/TrEMBL;Acc:Q941R7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.