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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012364.1-P Field mustard cytosol 100.0 100.0
CDY12480 Canola cytosol 80.5 79.5
CDY41463 Canola cytosol 74.84 73.91
CDY12485 Canola cytosol 34.59 55.56
CDX91696 Canola cytosol 54.72 55.41
CDY41465 Canola cytosol 54.09 54.78
CDY09495 Canola cytosol 54.09 54.43
CDY03715 Canola cytosol 55.97 54.27
CDY12484 Canola cytosol 54.09 53.75
CDY65619 Canola cytosol 55.35 53.66
CDY12482 Canola cytosol 42.14 53.6
CDY09499 Canola cytosol 45.91 53.28
CDY25771 Canola cytosol 52.2 52.2
CDY23474 Canola cytosol 53.46 52.15
CDX68328 Canola cytosol 53.46 51.83
CDX72753 Canola cytosol 48.43 48.73
CDY21418 Canola cytosol 53.46 46.7
CDY70076 Canola cytosol 42.14 46.21
CDY00801 Canola cytosol 50.31 45.2
CDX89696 Canola cytosol 42.77 45.03
CDX96283 Canola cytosol 38.99 44.93
CDX72752 Canola cytosol 38.36 44.2
CDY17433 Canola cytosol 40.88 43.05
CDY03713 Canola cytosol 41.51 42.86
CDY68859 Canola cytosol 38.36 42.07
KRH13947 Soybean cytosol 37.74 38.71
CDY16542 Canola cytosol 32.7 38.52
CDY03718 Canola cytosol 55.35 38.43
CDY09492 Canola cytosol 55.35 38.43
Solyc01g081130.2.1 Tomato cytosol 18.24 38.16
VIT_01s0011g05170.t01 Wine grape cytosol 15.09 37.5
CDX92456 Canola cytosol 31.45 37.04
KRH37979 Soybean cytosol 35.22 36.13
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 33.33 35.33
PGSC0003DMT400021868 Potato cytosol 33.33 35.33
Solyc09g014530.2.1 Tomato cytosol, extracellular 33.33 35.33
Solyc04g007830.2.1 Tomato cytosol 29.56 35.07
KRH13946 Soybean cytosol 33.96 34.84
VIT_01s0011g05190.t01 Wine grape cytosol 32.7 34.44
VIT_01s0011g05180.t01 Wine grape cytosol 32.7 34.44
Solyc05g046160.1.1 Tomato cytosol 13.84 34.38
PGSC0003DMT400073916 Potato cytosol 25.79 34.17
PGSC0003DMT400025419 Potato cytosol 28.3 34.09
VIT_01s0011g05150.t01 Wine grape cytosol 29.56 34.06
PGSC0003DMT400031542 Potato cytosol 32.7 33.99
Solyc09g014540.1.1 Tomato cytosol 21.38 33.66
Solyc09g014580.2.1 Tomato cytosol 32.08 33.55
PGSC0003DMT400022721 Potato cytosol 32.08 33.33
PGSC0003DMT400073915 Potato cytosol 32.08 33.33
PGSC0003DMT400021866 Potato cytosol 31.45 32.89
KRH13944 Soybean cytosol 28.93 32.86
CDX96282 Canola cytosol 25.16 32.79
PGSC0003DMT400041449 Potato cytosol 23.27 32.46
Solyc09g014560.1.1 Tomato cytosol 15.09 32.43
Solyc05g046220.1.1 Tomato cytosol 19.5 32.29
PGSC0003DMT400021867 Potato cytosol 30.82 32.24
PGSC0003DMT400025429 Potato cytosol 30.19 32.0
PGSC0003DMT400025420 Potato cytosol 30.19 31.79
Solyc09g014550.2.1 Tomato cytosol 30.19 31.58
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 31.45 31.45
Solyc09g005420.2.1 Tomato cytosol 29.56 31.33
Solyc09g005400.2.1 Tomato cytosol 29.56 31.33
Solyc09g005410.1.1 Tomato cytosol 26.42 30.88
PGSC0003DMT400041446 Potato cytosol 28.93 30.67
PGSC0003DMT400031386 Potato cytosol 28.93 30.46
PGSC0003DMT400004549 Potato cytosol 28.93 30.26
PGSC0003DMT400075925 Potato cytosol 22.01 30.17
PGSC0003DMT400041455 Potato cytosol 26.42 27.81
Solyc05g046150.2.1 Tomato cytosol, extracellular 25.79 27.33
PGSC0003DMT400022679 Potato cytosol 25.79 27.15
PGSC0003DMT400077743 Potato cytosol 24.53 25.83
Solyc09g005500.2.1 Tomato extracellular 24.53 25.83
CDY11541 Canola cytosol 25.16 25.81
PGSC0003DMT400056811 Potato cytosol 20.75 25.58
CDY09498 Canola cytosol 23.27 25.34
PGSC0003DMT400059724 Potato cytosol 33.33 24.54
PGSC0003DMT400091938 Potato cytosol 23.9 24.52
CDY03712 Canola cytosol 22.01 23.97
CDY41464 Canola cytosol 21.38 23.13
CDX91697 Canola cytosol 18.24 19.59
CDY41462 Canola cytosol 17.61 19.18
PGSC0003DMT400044158 Potato cytosol 16.98 18.75
PGSC0003DMT400020053 Potato cytosol 31.45 16.89
PGSC0003DMT400075928 Potato cytosol 31.45 16.84
Protein Annotations
EnsemblPlants:CDY25772EnsemblPlantsGene:GSBRNA2T00033169001Gene3D:3.30.530.20GO:A0A078GKT3GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PANTHER:PTHR31907:SF4PFAM:PF00407ProteinID:CDY25772ProteinID:CDY25772.1SMART:SM01037SUPFAM:SSF55961
UniParc:UPI0002541412UniProt:A0A078GKT3MapMan:35.1:::
Description
BnaA07g10100DBnaA07g10100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKT3]
Coordinates
chrLK032180:+:248820..250985
Molecular Weight (calculated)
17409.1 Da
IEP (calculated)
5.306
GRAVY (calculated)
-0.280
Length
159 amino acids
Sequence
(BLAST)
001: MAQAMMKSSL QGEVEADVEI KAPATEFFHM FAARPQDVSK ASPENVQGCN VQGGEMGRVG TLITWNYVLD GKPKVATERI EAVDPKKNMI KLKVIEGDLT
101: KDFKNFIVTI QVTPKQGGPG GVAKLNIAYE RIDENVAHPE TLLQTGVKMF KDIDEMLSG
Best Arabidopsis Sequence Match ( AT1G23130.1 )
(BLAST)
001: MAQATRQSSL QGELEVDIEI KASAKKFHHM LSGRPQDVAK ATPDIQGCAL HEGEFGKVGS VIFWNYAIDG QPKVARERIE AVDQEKNLLV LRVIDGDLTK
101: EFKSFLVTIQ ATPKLRGPGS VVKCHLKYER IDEKVAPPEK LLELFAKLTE SMDEMLLSEV
Arabidopsis Description
At1g23130/T26J12_10 [Source:UniProtKB/TrEMBL;Acc:O49304]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.