Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDY22369 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G70830.1 | CDY22369 | AT5G43080.1 | 20706207 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96282 | Canola | cytosol | 66.45 | 84.43 |
| VIT_01s0011g05170.t01 | Wine grape | cytosol | 21.94 | 53.12 |
| Solyc09g014560.1.1 | Tomato | cytosol | 17.42 | 36.49 |
| Bra016182.1-P | Field mustard | cytosol | 47.74 | 35.58 |
| CDY03715 | Canola | cytosol | 36.77 | 34.76 |
| CDY65619 | Canola | cytosol | 36.77 | 34.76 |
| CDY23474 | Canola | cytosol | 34.84 | 33.13 |
| CDX68328 | Canola | cytosol | 34.19 | 32.32 |
| CDY09495 | Canola | cytosol | 32.9 | 32.28 |
| CDY00801 | Canola | cytosol | 36.77 | 32.2 |
| CDY03713 | Canola | cytosol | 30.97 | 31.17 |
| CDY03718 | Canola | cytosol | 44.52 | 30.13 |
| CDY09492 | Canola | cytosol | 44.52 | 30.13 |
| CDX91696 | Canola | cytosol | 29.03 | 28.66 |
| CDY09499 | Canola | cytosol | 25.16 | 28.47 |
| CDY41465 | Canola | cytosol | 28.39 | 28.03 |
| CDY21418 | Canola | cytosol | 32.9 | 28.02 |
| CDX72753 | Canola | cytosol | 28.39 | 27.85 |
| CDY12484 | Canola | cytosol | 28.39 | 27.5 |
| PGSC0003DMT400041449 | Potato | cytosol | 20.0 | 27.19 |
| CDY12485 | Canola | cytosol | 16.13 | 25.25 |
| VIT_01s0011g05190.t01 | Wine grape | cytosol | 24.52 | 25.17 |
| CDX89696 | Canola | cytosol | 24.52 | 25.17 |
| CDY25772 | Canola | cytosol | 25.81 | 25.16 |
| Solyc01g081130.2.1 | Tomato | cytosol | 12.26 | 25.0 |
| CDY17433 | Canola | cytosol | 23.23 | 23.84 |
| CDY16542 | Canola | cytosol | 20.65 | 23.7 |
| CDY41463 | Canola | cytosol | 24.52 | 23.6 |
| KRH13947 | Soybean | cytosol | 23.23 | 23.23 |
| CDY12480 | Canola | cytosol | 23.87 | 22.98 |
| Solyc05g046140.2.1 | Tomato | endoplasmic reticulum, extracellular | 21.94 | 22.67 |
| VIT_01s0011g05180.t01 | Wine grape | cytosol | 21.94 | 22.52 |
| PGSC0003DMT400031542 | Potato | cytosol | 21.94 | 22.22 |
| PGSC0003DMT400041455 | Potato | cytosol | 21.29 | 21.85 |
| PGSC0003DMT400025420 | Potato | cytosol | 21.29 | 21.85 |
| PGSC0003DMT400073915 | Potato | cytosol | 21.29 | 21.57 |
| PGSC0003DMT400022721 | Potato | cytosol | 21.29 | 21.57 |
| KRH13944 | Soybean | cytosol | 19.35 | 21.43 |
| PGSC0003DMT400025429 | Potato | cytosol | 20.65 | 21.33 |
| Solyc09g005410.1.1 | Tomato | cytosol | 18.71 | 21.32 |
| KRH37979 | Soybean | cytosol | 21.29 | 21.29 |
| Solyc09g005500.2.1 | Tomato | extracellular | 20.65 | 21.19 |
| PGSC0003DMT400022679 | Potato | cytosol | 20.65 | 21.19 |
| Solyc09g014580.2.1 | Tomato | cytosol | 20.65 | 21.05 |
| AT1G70830.1 | Thale cress | cytosol | 45.16 | 20.9 |
| CDX92456 | Canola | cytosol | 18.06 | 20.74 |
| Solyc09g005420.2.1 | Tomato | cytosol | 20.0 | 20.67 |
| Solyc09g005400.2.1 | Tomato | cytosol | 20.0 | 20.67 |
| PGSC0003DMT400077743 | Potato | cytosol | 20.0 | 20.53 |
| PGSC0003DMT400021867 | Potato | cytosol | 20.0 | 20.39 |
| CDX72752 | Canola | cytosol | 18.06 | 20.29 |
| VIT_01s0011g05150.t01 | Wine grape | cytosol | 18.06 | 20.29 |
| Solyc07g008710.2.1 | Tomato | cytosol, extracellular, nucleus | 20.65 | 20.13 |
| CDY70076 | Canola | cytosol | 18.71 | 20.0 |
| PGSC0003DMT400021868 | Potato | cytosol | 19.35 | 20.0 |
| Solyc09g014550.2.1 | Tomato | cytosol | 19.35 | 19.74 |
| PGSC0003DMT400021866 | Potato | cytosol | 19.35 | 19.74 |
| KRH13946 | Soybean | cytosol | 19.35 | 19.35 |
| PGSC0003DMT400041446 | Potato | cytosol | 18.71 | 19.33 |
| CDY68859 | Canola | cytosol | 18.06 | 19.31 |
| CDY25771 | Canola | cytosol | 19.35 | 18.87 |
| CDX96283 | Canola | cytosol | 16.77 | 18.84 |
| Solyc09g014530.2.1 | Tomato | cytosol, extracellular | 18.06 | 18.67 |
| PGSC0003DMT400056811 | Potato | cytosol | 15.48 | 18.6 |
| PGSC0003DMT400031386 | Potato | cytosol | 18.06 | 18.54 |
| PGSC0003DMT400025419 | Potato | cytosol | 15.48 | 18.18 |
| PGSC0003DMT400091938 | Potato | cytosol | 18.06 | 18.06 |
| Solyc05g046150.2.1 | Tomato | cytosol, extracellular | 17.42 | 18.0 |
| Solyc04g007830.2.1 | Tomato | cytosol | 14.84 | 17.16 |
| PGSC0003DMT400004549 | Potato | cytosol | 16.77 | 17.11 |
| CDY12482 | Canola | cytosol | 12.9 | 16.0 |
| PGSC0003DMT400059724 | Potato | cytosol | 21.29 | 15.28 |
| CDY03712 | Canola | cytosol | 13.55 | 14.38 |
| CDY09498 | Canola | cytosol | 13.55 | 14.38 |
| PGSC0003DMT400075925 | Potato | cytosol | 10.32 | 13.79 |
| PGSC0003DMT400073916 | Potato | cytosol | 10.32 | 13.33 |
| PGSC0003DMT400020053 | Potato | cytosol | 21.94 | 11.49 |
| PGSC0003DMT400075928 | Potato | cytosol | 20.0 | 10.44 |
| CDY41464 | Canola | cytosol | 9.03 | 9.52 |
| CDY41462 | Canola | cytosol | 8.39 | 8.9 |
| CDX91697 | Canola | cytosol | 8.39 | 8.78 |
| PGSC0003DMT400044158 | Potato | cytosol | 5.16 | 5.56 |
| Solyc09g014540.1.1 | Tomato | cytosol | 2.58 | 3.96 |
| Solyc05g046220.1.1 | Tomato | cytosol | 1.29 | 2.08 |
| Solyc05g046160.1.1 | Tomato | cytosol | 0.65 | 1.56 |
Protein Annotations
| EnsemblPlants:CDY11541 | EnsemblPlantsGene:GSBRNA2T00049630001 | Gene3D:3.30.530.20 | GO:A0A078FE73 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31907 |
| PANTHER:PTHR31907:SF4 | PFAM:PF00407 | ProteinID:CDY11541 | ProteinID:CDY11541.1 | SEG:seg | SMART:SM01037 |
| SUPFAM:SSF55961 | UniParc:UPI0004EE3FD9 | UniProt:A0A078FE73 | MapMan:35.1 | : | : |
Description
BnaC06g31980DBnaC06g31980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FE73]
Coordinates
chrLK032012:+:9341..10182
Molecular Weight (calculated)
16918.6 Da
IEP (calculated)
5.638
GRAVY (calculated)
-0.855
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAATEIAK KMEEKEETPV TVAPTKTVEA TSAEEGETKV TVAPPEKVEA TSKPAEEEVK TTETSSLLGK LEAYVEIKAS AEQFHNMFTA RPHHVSKASP
101: GYIQGCDLHE GDWGKPGSVI FWNYFHGKWR GKGGKGEDRS GGSGEEPDHV KGYRR
101: GYIQGCDLHE GDWGKPGSVI FWNYFHGKWR GKGGKGEDRS GGSGEEPDHV KGYRR
001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEEEEVKTPE TPSLVGKLET DVEIKASAEK
201: FHHMFAGKPH HVSKASPGNI QGCDLHEGDW GQVGSIVFWN YVHGKGKGG
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEEEEVKTPE TPSLVGKLET DVEIKASAEK
201: FHHMFAGKPH HVSKASPGNI QGCDLHEGDW GQVGSIVFWN YVHGKGKGG
Arabidopsis Description
MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.