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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:secretory
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400030176
PGSC0003DMT400030222
PGSC0003DMT400055428

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70830.1 PGSC0003DMT400030176 AT5G43080.1 20706207
AT1G70830.1 PGSC0003DMT400030222 AT5G43080.1 20706207
AT1G70830.1 PGSC0003DMT400055428 AT5G43080.1 20706207
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400077743 Potato cytosol 94.57 80.79
Solyc09g005500.2.1 Tomato extracellular 93.8 80.13
PGSC0003DMT400022679 Potato cytosol 90.7 77.48
PGSC0003DMT400041455 Potato cytosol 90.7 77.48
PGSC0003DMT400044158 Potato cytosol 75.97 68.06
PGSC0003DMT400091938 Potato cytosol 65.89 54.84
PGSC0003DMT400075925 Potato cytosol 44.96 50.0
PGSC0003DMT400073916 Potato cytosol 39.53 42.5
PGSC0003DMT400021868 Potato cytosol 48.06 41.33
PGSC0003DMT400025419 Potato cytosol 41.86 40.91
PGSC0003DMT400021866 Potato cytosol 48.06 40.79
PGSC0003DMT400025429 Potato cytosol 47.29 40.67
VIT_01s0011g05150.t01 Wine grape cytosol 42.64 39.86
PGSC0003DMT400004549 Potato cytosol 46.51 39.47
PGSC0003DMT400031542 Potato cytosol 45.74 38.56
PGSC0003DMT400025420 Potato cytosol 44.96 38.41
VIT_01s0011g05190.t01 Wine grape cytosol 44.96 38.41
PGSC0003DMT400041446 Potato cytosol 44.19 38.0
PGSC0003DMT400073915 Potato cytosol 44.96 37.91
PGSC0003DMT400022721 Potato cytosol 44.19 37.25
PGSC0003DMT400031386 Potato cytosol 43.41 37.09
KRH37979 Soybean cytosol 44.19 36.77
VIT_01s0011g05180.t01 Wine grape cytosol 41.86 35.76
PGSC0003DMT400041449 Potato cytosol 31.01 35.09
PGSC0003DMT400021867 Potato cytosol 41.09 34.87
VIT_01s0011g05170.t01 Wine grape cytosol 17.05 34.38
CDY09495 Canola cytosol 41.86 34.18
CDY12485 Canola cytosol 25.58 33.33
CDY41465 Canola cytosol 39.53 32.48
Bra016364.1-P Field mustard cytosol 39.53 32.48
AT1G70890.1 Thale cress cytosol 39.53 32.28
AT5G28010.2 Thale cress cytosol 41.09 31.93
Bra007947.1-P Field mustard cytosol 38.76 31.65
KRH13947 Soybean cytosol 37.98 31.61
CDY03713 Canola cytosol 37.21 31.17
CDY65619 Canola cytosol 39.53 31.1
CDY03715 Canola cytosol 39.53 31.1
Bra003939.1-P Field mustard cytosol 38.76 30.67
CDX91696 Canola cytosol 37.21 30.57
CDX68328 Canola cytosol 38.76 30.49
CDY23474 Canola cytosol 37.98 30.06
Bra012362.1-P Field mustard cytosol 37.21 30.0
KRH13946 Soybean cytosol 35.66 29.68
AT1G70860.2 Thale cress cytosol 17.05 29.33
AT1G70840.1 Thale cress cytosol 38.76 29.24
AT1G70880.1 Thale cress cytosol 35.66 28.93
CDY12484 Canola cytosol 35.66 28.75
Bra016179.1-P Field mustard cytosol 32.56 28.57
CDY09499 Canola cytosol 30.23 28.47
Bra016180.1-P Field mustard cytosol 30.23 28.26
PGSC0003DMT400059724 Potato cytosol 47.29 28.24
Bra016178.1-P Field mustard cytosol 34.11 27.85
CDX72752 Canola cytosol 29.46 27.54
AT5G28000.1 Thale cress cytosol 34.88 27.44
CDX72753 Canola cytosol 33.33 27.22
CDY12482 Canola cytosol 26.36 27.2
CDX89696 Canola cytosol 31.78 27.15
Bra024564.1-P Field mustard cytosol 37.98 26.92
CDY21418 Canola cytosol 37.98 26.92
KRH13944 Soybean cytosol 28.68 26.43
Bra007946.1-P Field mustard cytosol 27.91 26.28
CDY17433 Canola cytosol 30.23 25.83
Bra016182.1-P Field mustard cytosol 41.09 25.48
AT1G35260.1 Thale cress cytosol 29.46 25.0
CDX96283 Canola cytosol 26.36 24.64
Bra016181.1-P Field mustard cytosol 26.36 24.64
CDY25771 Canola cytosol 30.23 24.53
CDY16542 Canola cytosol 25.58 24.44
Bra002309.1-P Field mustard cytosol 25.58 24.44
AT1G23130.1 Thale cress cytosol 30.23 24.38
Bra012363.1-P Field mustard cytosol 30.23 24.22
AT1G35310.1 Thale cress cytosol 27.91 23.84
CDX92456 Canola cytosol 24.81 23.7
CDY00801 Canola cytosol 31.78 23.16
CDY12480 Canola cytosol 28.68 22.98
CDY70076 Canola cytosol 25.58 22.76
CDY41463 Canola cytosol 27.91 22.36
Bra016362.1-P Field mustard cytosol 27.91 22.36
CDY03718 Canola cytosol 39.53 22.27
CDY09492 Canola cytosol 39.53 22.27
Bra007945.1-P Field mustard cytosol 39.53 22.27
PGSC0003DMT400020053 Potato cytosol 49.61 21.62
Bra012361.1-P Field mustard cytosol 23.26 21.58
Bra012364.1-P Field mustard cytosol 25.58 20.75
CDY25772 Canola cytosol 25.58 20.75
CDY68859 Canola cytosol 22.48 20.0
CDX96282 Canola cytosol 18.6 19.67
PGSC0003DMT400075928 Potato cytosol 44.96 19.53
AT1G70850.1 Thale cress cytosol 44.19 18.04
Bra007949.1-P Field mustard cytosol 34.88 17.86
CDY11541 Canola cytosol 18.6 15.48
AT1G70830.1 Thale cress cytosol 39.53 15.22
Protein Annotations
EnsemblPlants:PGSC0003DMT400056811EnsemblPlantsGene:PGSC0003DMG400022094Gene3D:3.30.530.20GO:GO:0006950GO:GO:0006952GO:GO:0008150
GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907PANTHER:PTHR31907:SF4
PFAM:PF00407PGSC:PGSC0003DMG400022094SEG:segSMART:SM01037SUPFAM:SSF55961UniParc:UPI000295C0CE
UniProt:M1BZX2MapMan:35.1::::
Description
Major latex [Source:PGSC_GENE;Acc:PGSC0003DMG400022094]
Coordinates
chr00:-:27496782..27498354
Molecular Weight (calculated)
14939.6 Da
IEP (calculated)
5.484
GRAVY (calculated)
-0.512
Length
129 amino acids
Sequence
(BLAST)
001: MFCEKPHHLP NVVPQTIQAV DLHEGDWGTV GSVVNWNYTM EGQEKVVKVV VDDINKEKRL VTFKAFEGHV IEEYKAFKAT LHIENKGDNN LVIWTIEYEK
101: QNEHIPEPFS YLQLATNITK DVDTHHVNQ
Best Arabidopsis Sequence Match ( AT1G70850.1 )
(BLAST)
001: MAKTEAPSLV GKLETEVEIK ASAGQFHHMF AGKPHHVSKA SPGNIQSCDL HEGDWGTVGS IVFWNYVHDG EAKVAKERIE AVEPEKNLIT FRVIEGDLMK
101: EYKSFLITIQ VTPKHGGPGS IVHWHLEYEK ISDEVAHPET LLQFCVEVSQ EIDEHLLSEE EEVKTTETLE TEVEIKASAE KFHHMFAGKP HHVSKATPGN
201: IQSCDLHEGD WGTVGSIVFW NYVHDGEAKV AKERIEAVDP EKNLITFRVI EGDLMKEYKS FVITIQVTPK HGGSGSVVHW HFEYEKINEE VAHPETLLQF
301: AVEVSKEIDE HLLAEE
Arabidopsis Description
MLP34MLP-like protein 34 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.