Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25771 | Canola | cytosol | 92.0 | 72.33 |
| AT1G23130.1 | Thale cress | cytosol | 64.0 | 50.0 |
| CDY12485 | Canola | cytosol | 37.6 | 47.47 |
| CDY41463 | Canola | cytosol | 56.0 | 43.48 |
| CDY12480 | Canola | cytosol | 56.0 | 43.48 |
| CDY03715 | Canola | cytosol | 56.0 | 42.68 |
| CDY41465 | Canola | cytosol | 53.6 | 42.68 |
| CDY25772 | Canola | cytosol | 53.6 | 42.14 |
| CDY65619 | Canola | cytosol | 55.2 | 42.07 |
| CDX91696 | Canola | cytosol | 52.8 | 42.04 |
| CDY09495 | Canola | cytosol | 52.8 | 41.77 |
| CDY23474 | Canola | cytosol | 53.6 | 41.1 |
| CDX68328 | Canola | cytosol | 53.6 | 40.85 |
| CDY12484 | Canola | cytosol | 51.2 | 40.0 |
| CDY09499 | Canola | cytosol | 42.4 | 38.69 |
| CDX72753 | Canola | cytosol | 46.4 | 36.71 |
| CDX96283 | Canola | cytosol | 38.4 | 34.78 |
| VIT_01s0011g05150.t01 | Wine grape | cytosol | 37.6 | 34.06 |
| PGSC0003DMT400075925 | Potato | cytosol | 31.2 | 33.62 |
| CDY21418 | Canola | cytosol | 48.8 | 33.52 |
| CDX72752 | Canola | cytosol | 36.8 | 33.33 |
| CDY17433 | Canola | cytosol | 40.0 | 33.11 |
| CDX89696 | Canola | cytosol | 40.0 | 33.11 |
| CDY03718 | Canola | cytosol | 56.0 | 30.57 |
| CDY03713 | Canola | cytosol | 37.6 | 30.52 |
| CDY09492 | Canola | cytosol | 55.2 | 30.13 |
| CDY00801 | Canola | cytosol | 42.4 | 29.94 |
| CDY70076 | Canola | cytosol | 34.4 | 29.66 |
| KRH37979 | Soybean | cytosol | 36.0 | 29.03 |
| KRH13947 | Soybean | cytosol | 36.0 | 29.03 |
| CDY16542 | Canola | cytosol | 31.2 | 28.89 |
| CDX92456 | Canola | cytosol | 29.6 | 27.41 |
| VIT_01s0011g05190.t01 | Wine grape | cytosol | 32.8 | 27.15 |
| CDY68859 | Canola | cytosol | 31.2 | 26.9 |
| KRH13946 | Soybean | cytosol | 32.8 | 26.45 |
| PGSC0003DMT400056811 | Potato | cytosol | 27.2 | 26.36 |
| Solyc01g081130.2.1 | Tomato | cytosol | 16.0 | 26.32 |
| PGSC0003DMT400073916 | Potato | cytosol | 24.8 | 25.83 |
| VIT_01s0011g05180.t01 | Wine grape | cytosol | 31.2 | 25.83 |
| Solyc04g007830.2.1 | Tomato | cytosol | 27.2 | 25.37 |
| Solyc05g046160.1.1 | Tomato | cytosol | 12.8 | 25.0 |
| Solyc05g046140.2.1 | Tomato | endoplasmic reticulum, extracellular | 29.6 | 24.67 |
| PGSC0003DMT400041449 | Potato | cytosol | 22.4 | 24.56 |
| PGSC0003DMT400031386 | Potato | cytosol | 29.6 | 24.5 |
| KRH13944 | Soybean | cytosol | 27.2 | 24.29 |
| PGSC0003DMT400025419 | Potato | cytosol | 25.6 | 24.24 |
| PGSC0003DMT400077743 | Potato | cytosol | 28.8 | 23.84 |
| PGSC0003DMT400031542 | Potato | cytosol | 28.8 | 23.53 |
| VIT_01s0011g05170.t01 | Wine grape | cytosol | 12.0 | 23.44 |
| Solyc05g046150.2.1 | Tomato | cytosol, extracellular | 28.0 | 23.33 |
| PGSC0003DMT400022679 | Potato | cytosol | 28.0 | 23.18 |
| Solyc09g005500.2.1 | Tomato | extracellular | 28.0 | 23.18 |
| PGSC0003DMT400041455 | Potato | cytosol | 27.2 | 22.52 |
| PGSC0003DMT400021867 | Potato | cytosol | 27.2 | 22.37 |
| PGSC0003DMT400073915 | Potato | cytosol | 27.2 | 22.22 |
| PGSC0003DMT400022721 | Potato | cytosol | 27.2 | 22.22 |
| Solyc07g008710.2.1 | Tomato | cytosol, extracellular, nucleus | 28.0 | 22.01 |
| PGSC0003DMT400025429 | Potato | cytosol | 26.4 | 22.0 |
| Solyc09g014530.2.1 | Tomato | cytosol, extracellular | 26.4 | 22.0 |
| PGSC0003DMT400021868 | Potato | cytosol | 26.4 | 22.0 |
| PGSC0003DMT400021866 | Potato | cytosol | 26.4 | 21.71 |
| Solyc09g014560.1.1 | Tomato | cytosol | 12.8 | 21.62 |
| Solyc09g005400.2.1 | Tomato | cytosol | 25.6 | 21.33 |
| CDY41464 | Canola | cytosol | 24.8 | 21.09 |
| Solyc09g014580.2.1 | Tomato | cytosol | 25.6 | 21.05 |
| Solyc09g014550.2.1 | Tomato | cytosol | 25.6 | 21.05 |
| Solyc09g005420.2.1 | Tomato | cytosol | 24.8 | 20.67 |
| PGSC0003DMT400091938 | Potato | cytosol | 25.6 | 20.65 |
| PGSC0003DMT400004549 | Potato | cytosol | 24.8 | 20.39 |
| PGSC0003DMT400041446 | Potato | cytosol | 24.0 | 20.0 |
| Solyc05g046220.1.1 | Tomato | cytosol | 15.2 | 19.79 |
| PGSC0003DMT400025420 | Potato | cytosol | 23.2 | 19.21 |
| Solyc09g005410.1.1 | Tomato | cytosol | 20.8 | 19.12 |
| PGSC0003DMT400059724 | Potato | cytosol | 32.8 | 18.98 |
| Solyc09g014540.1.1 | Tomato | cytosol | 15.2 | 18.81 |
| PGSC0003DMT400044158 | Potato | cytosol | 20.0 | 17.36 |
| CDX96282 | Canola | cytosol | 16.8 | 17.21 |
| CDY09498 | Canola | cytosol | 20.0 | 17.12 |
| CDY03712 | Canola | cytosol | 19.2 | 16.44 |
| CDX91697 | Canola | cytosol | 19.2 | 16.22 |
| CDY41462 | Canola | cytosol | 17.6 | 15.07 |
| PGSC0003DMT400075928 | Potato | cytosol | 33.6 | 14.14 |
| PGSC0003DMT400020053 | Potato | cytosol | 32.8 | 13.85 |
| CDY11541 | Canola | cytosol | 16.0 | 12.9 |
Protein Annotations
| EnsemblPlants:CDY12482 | EnsemblPlantsGene:GSBRNA2T00061792001 | Gene3D:3.30.530.20 | GO:A0A078FHN2 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31907 |
| PANTHER:PTHR31907:SF4 | PFAM:PF00407 | ProteinID:CDY12482 | ProteinID:CDY12482.1 | SMART:SM01037 | SUPFAM:SSF55961 |
| UniParc:UPI0004EEC714 | UniProt:A0A078FHN2 | MapMan:35.1 | : | : | : |
Description
BnaC07g13220DBnaC07g13220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHN2]
Coordinates
chrLK032023:-:191287..192085
Molecular Weight (calculated)
14194.4 Da
IEP (calculated)
8.217
GRAVY (calculated)
-0.320
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQATMHPDN LQKCDVLEGE PGKVGRIISW NYVTDGQPKV MKERIEALEP EKNLMVARVI GGDLMKEFKN FFLTIQATPK QRGPGSVVKC HLKYERIDKK
101: VADPEDILVL FVNASTWTKM LSSEF
101: VADPEDILVL FVNASTWTKM LSSEF
001: MAQATRQSSL QGELEVDIEI KASAKKFHHM LSGRPQDVAK ATPDIQGCAL HEGEFGKVGS VIFWNYAIDG QPKVARERIE AVDQEKNLLV LRVIDGDLTK
101: EFKSFLVTIQ ATPKLRGPGS VVKCHLKYER IDEKVAPPEK LLELFAKLTE SMDEMLLSEV
101: EFKSFLVTIQ ATPKLRGPGS VVKCHLKYER IDEKVAPPEK LLELFAKLTE SMDEMLLSEV
Arabidopsis Description
At1g23130/T26J12_10 [Source:UniProtKB/TrEMBL;Acc:O49304]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.