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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY22369

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70830.1 CDY22369 AT5G43080.1 20706207
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY03715 Canola cytosol 99.39 99.39
Bra007946.1-P Field mustard cytosol 80.49 96.35
CDY23474 Canola cytosol 90.24 90.8
CDX68328 Canola cytosol 90.24 90.24
CDY09495 Canola cytosol 82.32 85.44
CDY09499 Canola cytosol 61.59 73.72
CDY12485 Canola cytosol 42.68 70.71
CDY41465 Canola cytosol 65.85 68.79
CDX91696 Canola cytosol 64.63 67.52
CDX72752 Canola cytosol 56.1 66.67
CDX96283 Canola cytosol 55.49 65.94
CDX72753 Canola cytosol 63.41 65.82
CDY00801 Canola cytosol 70.73 65.54
CDY03713 Canola cytosol 59.76 63.64
CDY70076 Canola cytosol 56.1 63.45
CDY03718 Canola cytosol 87.8 62.88
CDY41463 Canola cytosol 60.98 62.11
CDY09492 Canola cytosol 86.59 62.01
CDY12484 Canola cytosol 59.15 60.62
CDY21418 Canola cytosol 67.07 60.44
CDY12480 Canola cytosol 58.54 59.63
CDY68859 Canola cytosol 52.44 59.31
CDX89696 Canola cytosol 53.05 57.62
VIT_01s0011g05170.t01 Wine grape cytosol 21.95 56.25
CDY17433 Canola cytosol 51.22 55.63
CDY25772 Canola cytosol 53.66 55.35
CDY12482 Canola cytosol 42.07 55.2
CDY25771 Canola cytosol 52.44 54.09
CDY16542 Canola cytosol 42.68 51.85
VIT_01s0011g05150.t01 Wine grape cytosol 42.07 50.0
VIT_01s0011g05190.t01 Wine grape cytosol 45.73 49.67
CDX92456 Canola cytosol 40.24 48.89
KRH37979 Soybean cytosol 43.9 46.45
KRH13947 Soybean cytosol 42.68 45.16
CDX96282 Canola cytosol 33.54 45.08
VIT_01s0011g05180.t01 Wine grape cytosol 41.46 45.03
AT1G70830.1 Thale cress cytosol 86.59 42.39
PGSC0003DMT400022679 Potato cytosol 39.02 42.38
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 38.41 42.0
PGSC0003DMT400041455 Potato cytosol 37.8 41.06
Solyc09g005500.2.1 Tomato extracellular 37.8 41.06
PGSC0003DMT400031386 Potato cytosol 37.8 41.06
PGSC0003DMT400077743 Potato cytosol 37.8 41.06
Solyc04g007830.2.1 Tomato cytosol 33.54 41.04
PGSC0003DMT400031542 Potato cytosol 37.2 39.87
PGSC0003DMT400056811 Potato cytosol 31.1 39.53
KRH13946 Soybean cytosol 37.2 39.35
PGSC0003DMT400022721 Potato cytosol 36.59 39.22
PGSC0003DMT400073915 Potato cytosol 36.59 39.22
Solyc05g046160.1.1 Tomato cytosol 15.24 39.06
PGSC0003DMT400075925 Potato cytosol 27.44 38.79
Solyc05g046150.2.1 Tomato cytosol, extracellular 35.37 38.67
PGSC0003DMT400025429 Potato cytosol 34.76 38.0
KRH13944 Soybean cytosol 32.32 37.86
PGSC0003DMT400025420 Potato cytosol 34.15 37.09
Solyc09g014550.2.1 Tomato cytosol 34.15 36.84
CDY11541 Canola cytosol 34.76 36.77
Solyc09g005410.1.1 Tomato cytosol 30.49 36.76
Solyc09g014530.2.1 Tomato cytosol, extracellular 33.54 36.67
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 35.37 36.48
Solyc09g014580.2.1 Tomato cytosol 33.54 36.18
Solyc09g005420.2.1 Tomato cytosol 32.93 36.0
PGSC0003DMT400021868 Potato cytosol 32.93 36.0
PGSC0003DMT400041449 Potato cytosol 25.0 35.96
PGSC0003DMT400073916 Potato cytosol 26.22 35.83
PGSC0003DMT400041446 Potato cytosol 32.32 35.33
Solyc09g005400.2.1 Tomato cytosol 32.32 35.33
Solyc09g014560.1.1 Tomato cytosol 15.85 35.14
PGSC0003DMT400021867 Potato cytosol 32.32 34.87
PGSC0003DMT400021866 Potato cytosol 32.32 34.87
PGSC0003DMT400025419 Potato cytosol 28.05 34.85
Solyc05g046220.1.1 Tomato cytosol 19.51 33.33
PGSC0003DMT400091938 Potato cytosol 31.1 32.9
Solyc01g081130.2.1 Tomato cytosol 15.24 32.89
CDY03712 Canola cytosol 28.05 31.51
PGSC0003DMT400004549 Potato cytosol 28.66 30.92
CDY09498 Canola cytosol 27.44 30.82
PGSC0003DMT400059724 Potato cytosol 39.63 30.09
CDY41464 Canola cytosol 26.22 29.25
CDY41462 Canola cytosol 25.61 28.77
Solyc09g014540.1.1 Tomato cytosol 17.07 27.72
CDX91697 Canola cytosol 25.0 27.7
PGSC0003DMT400044158 Potato cytosol 20.73 23.61
PGSC0003DMT400020053 Potato cytosol 40.24 22.3
PGSC0003DMT400075928 Potato cytosol 37.8 20.88
Protein Annotations
EnsemblPlants:CDY65619EnsemblPlantsGene:GSBRNA2T00046925001Gene3D:3.30.530.20GO:A0A078JG02GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PANTHER:PTHR31907:SF4PFAM:PF00407ProteinID:CDY65619ProteinID:CDY65619.1SMART:SM01037SUPFAM:SSF55961
UniParc:UPI0004EDFA6DUniProt:A0A078JG02MapMan:35.1:::
Description
BnaAnng20750DBnaAnng20750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JG02]
Coordinates
chrLK034864:+:4601..5898
Molecular Weight (calculated)
18268.7 Da
IEP (calculated)
5.488
GRAVY (calculated)
-0.291
Length
164 amino acids
Sequence
(BLAST)
001: MAEAAPTEAS SLVGKLETEV EIKASAGKFH HMFAGRPHHV SKASPGNIQG CDLHEGDWGK VGSIVYWNYI HGNVLSSVAK ERIEAVEPEK NLITFRVIEG
101: DLMKEYKSFL LTIQVTPKHG GPGSIVHWHL EYEKISEEVA HPETLLQFCV EVSKEIDEHL LSEE
Best Arabidopsis Sequence Match ( AT1G70830.5 )
(BLAST)
001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEE
Arabidopsis Description
MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.