Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g005420.2.1 | Tomato | cytosol | 91.18 | 82.67 |
| PGSC0003DMT400041446 | Potato | cytosol | 86.76 | 78.67 |
| Solyc09g005400.2.1 | Tomato | cytosol | 86.03 | 78.0 |
| PGSC0003DMT400041449 | Potato | cytosol | 63.24 | 75.44 |
| Solyc09g014530.2.1 | Tomato | cytosol, extracellular | 81.62 | 74.0 |
| Solyc09g014560.1.1 | Tomato | cytosol | 39.71 | 72.97 |
| Solyc09g014550.2.1 | Tomato | cytosol | 80.88 | 72.37 |
| Solyc09g014580.2.1 | Tomato | cytosol | 77.94 | 69.74 |
| Solyc01g081130.2.1 | Tomato | cytosol | 34.56 | 61.84 |
| Solyc07g008710.2.1 | Tomato | cytosol, extracellular, nucleus | 63.97 | 54.72 |
| Solyc09g014540.1.1 | Tomato | cytosol | 35.29 | 47.52 |
| VIT_01s0011g05170.t01 | Wine grape | cytosol | 22.06 | 46.88 |
| Solyc09g005500.2.1 | Tomato | extracellular | 47.06 | 42.38 |
| Solyc05g046160.1.1 | Tomato | cytosol | 19.85 | 42.19 |
| Solyc04g007830.2.1 | Tomato | cytosol | 38.97 | 39.55 |
| Solyc05g046140.2.1 | Tomato | endoplasmic reticulum, extracellular | 42.65 | 38.67 |
| VIT_01s0011g05190.t01 | Wine grape | cytosol | 42.65 | 38.41 |
| Solyc05g046150.2.1 | Tomato | cytosol, extracellular | 41.18 | 37.33 |
| Solyc05g046220.1.1 | Tomato | cytosol | 25.74 | 36.46 |
| VIT_01s0011g05150.t01 | Wine grape | cytosol | 36.03 | 35.51 |
| VIT_01s0011g05180.t01 | Wine grape | cytosol | 38.24 | 34.44 |
| AT1G70890.1 | Thale cress | cytosol | 38.24 | 32.91 |
| KRH13947 | Soybean | cytosol | 36.76 | 32.26 |
| CDY65619 | Canola | cytosol | 36.76 | 30.49 |
| CDY03715 | Canola | cytosol | 36.76 | 30.49 |
| CDY09495 | Canola | cytosol | 35.29 | 30.38 |
| Bra003939.1-P | Field mustard | cytosol | 36.03 | 30.06 |
| CDX68328 | Canola | cytosol | 36.03 | 29.88 |
| AT5G28010.2 | Thale cress | cytosol | 36.03 | 29.52 |
| CDY23474 | Canola | cytosol | 35.29 | 29.45 |
| KRH37979 | Soybean | cytosol | 33.09 | 29.03 |
| AT1G70840.1 | Thale cress | cytosol | 36.03 | 28.66 |
| Bra016180.1-P | Field mustard | cytosol | 28.68 | 28.26 |
| Bra012362.1-P | Field mustard | cytosol | 33.09 | 28.12 |
| CDY12484 | Canola | cytosol | 33.09 | 28.12 |
| AT1G70860.2 | Thale cress | cytosol | 15.44 | 28.0 |
| CDX89696 | Canola | cytosol | 30.88 | 27.81 |
| KRH13946 | Soybean | cytosol | 31.62 | 27.74 |
| AT1G35260.1 | Thale cress | cytosol | 30.88 | 27.63 |
| CDX72752 | Canola | cytosol | 27.94 | 27.54 |
| Bra016364.1-P | Field mustard | cytosol | 31.62 | 27.39 |
| CDY41465 | Canola | cytosol | 31.62 | 27.39 |
| CDX91696 | Canola | cytosol | 31.62 | 27.39 |
| Bra007946.1-P | Field mustard | cytosol | 27.21 | 27.01 |
| AT5G28000.1 | Thale cress | cytosol | 32.35 | 26.83 |
| CDX96283 | Canola | cytosol | 27.21 | 26.81 |
| Bra016181.1-P | Field mustard | cytosol | 27.21 | 26.81 |
| CDY16542 | Canola | cytosol | 26.47 | 26.67 |
| CDX92456 | Canola | cytosol | 26.47 | 26.67 |
| CDY03713 | Canola | cytosol | 30.15 | 26.62 |
| AT1G35310.1 | Thale cress | cytosol | 29.41 | 26.49 |
| AT1G70880.1 | Thale cress | cytosol | 30.88 | 26.42 |
| Bra012364.1-P | Field mustard | cytosol | 30.88 | 26.42 |
| CDY25772 | Canola | cytosol | 30.88 | 26.42 |
| Bra007947.1-P | Field mustard | cytosol | 30.15 | 25.95 |
| CDY17433 | Canola | cytosol | 28.68 | 25.83 |
| AT1G23130.1 | Thale cress | cytosol | 30.15 | 25.62 |
| Bra002309.1-P | Field mustard | cytosol | 25.0 | 25.19 |
| Bra016179.1-P | Field mustard | cytosol | 27.21 | 25.17 |
| CDY12480 | Canola | cytosol | 29.41 | 24.84 |
| CDY21418 | Canola | cytosol | 33.09 | 24.73 |
| Bra024564.1-P | Field mustard | cytosol | 33.09 | 24.73 |
| CDY00801 | Canola | cytosol | 31.62 | 24.29 |
| KRH13944 | Soybean | cytosol | 25.0 | 24.29 |
| CDY09499 | Canola | cytosol | 24.26 | 24.09 |
| Bra016178.1-P | Field mustard | cytosol | 27.94 | 24.05 |
| Bra016182.1-P | Field mustard | cytosol | 36.76 | 24.04 |
| CDX72753 | Canola | cytosol | 27.21 | 23.42 |
| CDY12485 | Canola | cytosol | 16.91 | 23.23 |
| CDY09492 | Canola | cytosol | 38.97 | 23.14 |
| Bra007945.1-P | Field mustard | cytosol | 38.97 | 23.14 |
| CDY03718 | Canola | cytosol | 38.97 | 23.14 |
| Bra016362.1-P | Field mustard | cytosol | 27.21 | 22.98 |
| CDY41463 | Canola | cytosol | 27.21 | 22.98 |
| Bra012361.1-P | Field mustard | cytosol | 22.79 | 22.3 |
| CDX96282 | Canola | cytosol | 19.85 | 22.13 |
| CDY12482 | Canola | cytosol | 19.12 | 20.8 |
| CDY25771 | Canola | cytosol | 22.79 | 19.5 |
| CDY70076 | Canola | cytosol | 20.59 | 19.31 |
| Bra012363.1-P | Field mustard | cytosol | 22.79 | 19.25 |
| CDY11541 | Canola | cytosol | 21.32 | 18.71 |
| CDY68859 | Canola | cytosol | 19.12 | 17.93 |
| Bra007949.1-P | Field mustard | cytosol | 31.62 | 17.06 |
| AT1G70850.1 | Thale cress | cytosol | 37.5 | 16.14 |
| AT1G70830.1 | Thale cress | cytosol | 36.03 | 14.63 |
Protein Annotations
| EnsemblPlants:Solyc09g005410.1.1 | EnsemblPlantsGene:Solyc09g005410.1 | Gene3D:3.30.530.20 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 |
| GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31907 | PANTHER:PTHR31907:SF4 |
| PFAM:PF00407 | SMART:SM01037 | SUPFAM:SSF55961 | UniParc:UPI000276B113 | UniProt:K4CQ31 | MapMan:35.1 |
Description
No Description!
Coordinates
chr9:-:301066..301598
Molecular Weight (calculated)
15515.6 Da
IEP (calculated)
4.958
GRAVY (calculated)
-0.171
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLKSVLCAK IEMKANKDVF HDVFTNKPHH VSTMFPLHVQ GFDLLEGDLG TVGSKICWTY TLDHENKVLT LKEFEGDVVD IYDSFKATLH IETKDEINLI
101: TWTLEYERPN DNVPELISLL NFIVGMTKAI DDHHAN
101: TWTLEYERPN DNVPELISLL NFIVGMTKAI DDHHAN
001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEE
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEE
Arabidopsis Description
MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.