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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY22369

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70830.1 CDY22369 AT5G43080.1 20706207
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY09499 Canola cytosol 56.5 72.99
CDY03715 Canola cytosol 65.54 70.73
CDY65619 Canola cytosol 65.54 70.73
CDY09495 Canola cytosol 60.45 67.72
CDY23474 Canola cytosol 62.15 67.48
CDX68328 Canola cytosol 62.15 67.07
CDX72752 Canola cytosol 49.72 63.77
CDX96283 Canola cytosol 49.15 63.04
CDY09492 Canola cytosol 81.36 62.88
CDY03718 Canola cytosol 81.36 62.88
CDY12485 Canola cytosol 35.03 62.63
CDY70076 Canola cytosol 49.15 60.0
CDY41465 Canola cytosol 50.85 57.32
CDX91696 Canola cytosol 50.28 56.69
CDY68859 Canola cytosol 45.76 55.86
CDX72753 Canola cytosol 48.59 54.43
CDY12480 Canola cytosol 48.02 52.8
CDY12484 Canola cytosol 47.46 52.5
CDY21418 Canola cytosol 53.11 51.65
CDY41463 Canola cytosol 46.89 51.55
CDY25772 Canola cytosol 45.2 50.31
CDY03713 Canola cytosol 40.68 46.75
CDX96282 Canola cytosol 31.64 45.9
CDX89696 Canola cytosol 38.42 45.03
CDY17433 Canola cytosol 37.85 44.37
CDY25771 Canola cytosol 38.42 42.77
CDY12482 Canola cytosol 29.94 42.4
VIT_01s0011g05190.t01 Wine grape cytosol 36.16 42.38
CDY16542 Canola cytosol 31.07 40.74
KRH13947 Soybean cytosol 35.59 40.65
Solyc05g046160.1.1 Tomato cytosol 14.69 40.62
VIT_01s0011g05150.t01 Wine grape cytosol 31.64 40.58
KRH37979 Soybean cytosol 35.03 40.0
Solyc04g007830.2.1 Tomato cytosol 29.38 38.81
CDX92456 Canola cytosol 29.38 38.52
KRH13946 Soybean cytosol 33.33 38.06
VIT_01s0011g05180.t01 Wine grape cytosol 32.2 37.75
AT1G70830.1 Thale cress cytosol 71.19 37.61
CDY11541 Canola cytosol 32.2 36.77
Solyc05g046220.1.1 Tomato cytosol 19.77 36.46
PGSC0003DMT400022679 Potato cytosol 30.51 35.76
Solyc09g014550.2.1 Tomato cytosol 30.51 35.53
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 29.94 35.33
PGSC0003DMT400031386 Potato cytosol 29.94 35.1
PGSC0003DMT400041455 Potato cytosol 29.94 35.1
PGSC0003DMT400021868 Potato cytosol 29.38 34.67
Solyc09g014530.2.1 Tomato cytosol, extracellular 29.38 34.67
VIT_01s0011g05170.t01 Wine grape cytosol 12.43 34.38
PGSC0003DMT400025429 Potato cytosol 28.81 34.0
PGSC0003DMT400022721 Potato cytosol 29.38 33.99
PGSC0003DMT400073915 Potato cytosol 29.38 33.99
PGSC0003DMT400031542 Potato cytosol 29.38 33.99
PGSC0003DMT400025419 Potato cytosol 24.86 33.33
Solyc09g005420.2.1 Tomato cytosol 28.25 33.33
Solyc09g005400.2.1 Tomato cytosol 28.25 33.33
PGSC0003DMT400077743 Potato cytosol 28.25 33.11
Solyc09g005500.2.1 Tomato extracellular 28.25 33.11
Solyc09g014580.2.1 Tomato cytosol 28.25 32.89
PGSC0003DMT400021867 Potato cytosol 28.25 32.89
PGSC0003DMT400075925 Potato cytosol 21.47 32.76
Solyc05g046150.2.1 Tomato cytosol, extracellular 27.68 32.67
PGSC0003DMT400021866 Potato cytosol 27.68 32.24
PGSC0003DMT400025420 Potato cytosol 27.12 31.79
PGSC0003DMT400056811 Potato cytosol 23.16 31.78
Solyc09g005410.1.1 Tomato cytosol 24.29 31.62
PGSC0003DMT400041449 Potato cytosol 20.34 31.58
KRH13944 Soybean cytosol 24.86 31.43
PGSC0003DMT400041446 Potato cytosol 26.55 31.33
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 27.68 30.82
PGSC0003DMT400073916 Potato cytosol 19.77 29.17
CDY09498 Canola cytosol 23.73 28.77
CDY03712 Canola cytosol 23.73 28.77
Solyc09g014540.1.1 Tomato cytosol 16.38 28.71
PGSC0003DMT400091938 Potato cytosol 24.86 28.39
PGSC0003DMT400004549 Potato cytosol 24.29 28.29
Solyc01g081130.2.1 Tomato cytosol 11.86 27.63
CDY41464 Canola cytosol 22.03 26.53
Solyc09g014560.1.1 Tomato cytosol 10.73 25.68
CDX91697 Canola cytosol 21.47 25.68
CDY41462 Canola cytosol 20.9 25.34
PGSC0003DMT400059724 Potato cytosol 30.51 25.0
PGSC0003DMT400044158 Potato cytosol 17.51 21.53
PGSC0003DMT400020053 Potato cytosol 30.51 18.24
PGSC0003DMT400075928 Potato cytosol 30.51 18.18
Protein Annotations
EnsemblPlants:CDY00801EnsemblPlantsGene:GSBRNA2T00110701001Gene3D:3.30.530.20GO:A0A078EI67GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PANTHER:PTHR31907:SF4PFAM:PF00407ProteinID:CDY00801ProteinID:CDY00801.1SEG:segSMART:SM01037
SUPFAM:SSF55961UniParc:UPI0004EED470MapMan:35.1:::
Description
BnaCnng00010D
Coordinates
chrLK031922:-:3814..4718
Molecular Weight (calculated)
19882.5 Da
IEP (calculated)
4.849
GRAVY (calculated)
-0.526
Length
177 amino acids
Sequence
(BLAST)
001: MAEAATEIAK KMEEEEETPV TVAPTKKVEA TSKPAEEEVK KTETSSLLGK LEAYVEIKAS AEKFHHMFTA KPHHVSKVSP GNIQGYGEAK VAKERIEEVD
101: PETNLISFRV IEGDLLKEYK SFLATIQVAP KHGGTGSIVH WHFEYEKISE EVAHPETLLQ LWVEMSKEID EHLLSEE
Best Arabidopsis Sequence Match ( AT1G70830.1 )
(BLAST)
001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEEEEVKTPE TPSLVGKLET DVEIKASAEK
201: FHHMFAGKPH HVSKASPGNI QGCDLHEGDW GQVGSIVFWN YVHDREAKVA KERIEAVEPN KNLITFRVID GDLMKEYKSF LLTIQVTPKL GGPGSIVHWH
301: LEYEKISEEV AHPETLLQFC VEVSKEIDEH LLAEE
Arabidopsis Description
MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.