Factsheet for VIT_01s0011g05180.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_18s0001g09580.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G70830.1	VIT_18s0001g09580.t01	AT5G43080.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0011g05150.t01	Wine grape	cytosol	70.2	76.81
VIT_01s0011g05190.t01	Wine grape	cytosol	67.55	67.55
VIT_01s0011g05170.t01	Wine grape	cytosol	28.48	67.19
VIT_01s0011g05120.t01	Wine grape	cytosol	47.68	47.68
Solyc05g046140.2.1	Tomato	endoplasmic reticulum, extracellular	45.03	45.33
PGSC0003DMT400022679	Potato	cytosol	45.03	45.03
PGSC0003DMT400041455	Potato	cytosol	45.03	45.03
PGSC0003DMT400077743	Potato	cytosol	44.37	44.37
VIT_01s0011g05110.t01	Wine grape	cytosol	44.37	44.37
CDY09495	Canola	cytosol	45.7	43.67
KRH13947	Soybean	cytosol	44.37	43.23
PGSC0003DMT400031386	Potato	cytosol	43.05	43.05
Solyc09g005500.2.1	Tomato	extracellular	42.38	42.38
VIT_01s0011g05130.t01	Wine grape	cytosol	42.38	42.38
Bra007946.1-P	Field mustard	cytosol	38.41	42.34
CDY23474	Canola	cytosol	45.7	42.33
PGSC0003DMT400056811	Potato	cytosol	35.76	41.86
Solyc04g007830.2.1	Tomato	cytosol	37.09	41.79
CDX68328	Canola	cytosol	45.03	41.46
CDY03715	Canola	cytosol	45.03	41.46
CDY65619	Canola	cytosol	45.03	41.46
AT1G70860.2	Thale cress	cytosol	20.53	41.33
AT1G70890.1	Thale cress	cytosol	43.05	41.14
Bra007947.1-P	Field mustard	cytosol	43.05	41.14
Bra003939.1-P	Field mustard	cytosol	44.37	41.1
AT1G70840.1	Thale cress	cytosol	46.36	40.94
Solyc09g005400.2.1	Tomato	cytosol	40.4	40.67
VIT_01s0011g05070.t01	Wine grape	cytosol	19.87	40.54
KRH37979	Soybean	cytosol	41.06	40.0
CDY09499	Canola	cytosol	35.76	39.42
PGSC0003DMT400025429	Potato	cytosol	39.07	39.33
Solyc09g005420.2.1	Tomato	cytosol	39.07	39.33
PGSC0003DMT400021867	Potato	cytosol	39.07	38.82
Solyc09g014550.2.1	Tomato	cytosol	39.07	38.82
Bra016179.1-P	Field mustard	cytosol	37.75	38.78
PGSC0003DMT400041446	Potato	cytosol	38.41	38.67
Solyc05g046150.2.1	Tomato	cytosol, extracellular	38.41	38.67
CDY12485	Canola	cytosol	25.17	38.38
AT1G70880.1	Thale cress	cytosol	40.4	38.36
CDY03713	Canola	cytosol	39.07	38.31
Solyc09g005410.1.1	Tomato	cytosol	34.44	38.24
PGSC0003DMT400075925	Potato	cytosol	29.14	37.93
CDX91696	Canola	cytosol	39.07	37.58
PGSC0003DMT400021866	Potato	cytosol	37.75	37.5
Solyc05g046160.1.1	Tomato	cytosol	15.89	37.5
PGSC0003DMT400091938	Potato	cytosol	38.41	37.42
Bra016178.1-P	Field mustard	cytosol	39.07	37.34
Solyc09g014530.2.1	Tomato	cytosol, extracellular	37.09	37.33
PGSC0003DMT400025420	Potato	cytosol	37.09	37.09
PGSC0003DMT400041449	Potato	cytosol	27.81	36.84
CDX72753	Canola	cytosol	38.41	36.71
PGSC0003DMT400021868	Potato	cytosol	36.42	36.67
PGSC0003DMT400031542	Potato	cytosol	37.09	36.6
PGSC0003DMT400073915	Potato	cytosol	37.09	36.6
PGSC0003DMT400025419	Potato	cytosol	31.79	36.36
Bra016364.1-P	Field mustard	cytosol	37.75	36.31
CDY41465	Canola	cytosol	37.75	36.31
AT1G23130.1	Thale cress	cytosol	38.41	36.25
Solyc09g014580.2.1	Tomato	cytosol	36.42	36.18
AT5G28010.2	Thale cress	cytosol	39.74	36.14
PGSC0003DMT400022721	Potato	cytosol	36.42	35.95
CDY70076	Canola	cytosol	34.44	35.86
Bra012362.1-P	Field mustard	cytosol	37.75	35.62
CDY12484	Canola	cytosol	37.75	35.62
PGSC0003DMT400004549	Potato	cytosol	35.76	35.53
KRH13946	Soybean	cytosol	36.42	35.48
Solyc05g046220.1.1	Tomato	cytosol	22.52	35.42
Solyc09g014560.1.1	Tomato	cytosol	17.22	35.14
Bra016180.1-P	Field mustard	cytosol	31.79	34.78
CDX72752	Canola	cytosol	31.79	34.78
Solyc01g081130.2.1	Tomato	cytosol	17.22	34.21
AT5G28000.1	Thale cress	cytosol	37.09	34.15
Solyc07g008710.2.1	Tomato	cytosol, extracellular, nucleus	35.76	33.96
CDY68859	Canola	cytosol	32.45	33.79
Bra012361.1-P	Field mustard	cytosol	30.46	33.09
Bra024564.1-P	Field mustard	cytosol	39.74	32.97
CDY21418	Canola	cytosol	39.74	32.97
Bra012364.1-P	Field mustard	cytosol	34.44	32.7
CDY25772	Canola	cytosol	34.44	32.7
Bra016181.1-P	Field mustard	cytosol	29.8	32.61
CDX96283	Canola	cytosol	29.8	32.61
PGSC0003DMT400073916	Potato	cytosol	25.83	32.5
CDY00801	Canola	cytosol	37.75	32.2
CDX89696	Canola	cytosol	31.79	31.79
CDY12480	Canola	cytosol	33.77	31.68
KRH13944	Soybean	cytosol	29.14	31.43
Bra016182.1-P	Field mustard	cytosol	43.05	31.25
CDY12482	Canola	cytosol	25.83	31.2
CDY17433	Canola	cytosol	31.13	31.13
Bra016362.1-P	Field mustard	cytosol	33.11	31.06
CDY41463	Canola	cytosol	33.11	31.06
AT1G35260.1	Thale cress	cytosol	31.13	30.92
Solyc09g014540.1.1	Tomato	cytosol	20.53	30.69
PGSC0003DMT400059724	Potato	cytosol	43.05	30.09
Bra007945.1-P	Field mustard	cytosol	44.37	29.26
CDY03718	Canola	cytosol	44.37	29.26
CDY09492	Canola	cytosol	44.37	29.26
AT1G35310.1	Thale cress	cytosol	29.14	29.14
PGSC0003DMT400044158	Potato	cytosol	27.15	28.47
CDY25771	Canola	cytosol	29.8	28.3
CDY16542	Canola	cytosol	24.5	27.41
Bra012363.1-P	Field mustard	cytosol	29.14	27.33
Bra002309.1-P	Field mustard	cytosol	23.84	26.67
CDX92456	Canola	cytosol	23.84	26.67
CDX96282	Canola	cytosol	21.19	26.23
Bra007949.1-P	Field mustard	cytosol	43.71	26.19
PGSC0003DMT400075928	Potato	cytosol	45.7	23.23
PGSC0003DMT400020053	Potato	cytosol	44.37	22.64
CDY11541	Canola	cytosol	22.52	21.94
AT1G70850.1	Thale cress	cytosol	45.03	21.52
AT1G70830.1	Thale cress	cytosol	43.05	19.4

Protein Annotations

EntrezGene:100853085	wikigene:100853085	Gene3D:3.30.530.20	MapMan:35.1	InterPro:Bet_v_I/MLP	ProteinID:CCB50819
ProteinID:CCB50819.1	UniProt:F6HFH0	EMBL:FN595752	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0009607	InterPro:IPR023393	EntrezGene:LOC100853085	wikigene:LOC100853085	PFAM:PF00407	PANTHER:PTHR31907
PANTHER:PTHR31907:SF4	SMART:SM01037	SUPFAM:SSF55961	InterPro:START-like_dom_sf	TIGR:TC52805	UniParc:UPI0002108788
ArrayExpress:VIT_01s0011g05180	EnsemblPlantsGene:VIT_01s0011g05180	EnsemblPlants:VIT_01s0011g05180.t01	unigene:Vvi.25139	RefSeq:XP_003631204	RefSeq:XP_003631204.1

Description

No Description!

Coordinates

chr1:+:4819645..4821386

Molecular Weight (calculated)

17188.6 Da

IEP (calculated)

5.239

GRAVY (calculated)

-0.243

Length

151 amino acids

Sequence
(BLAST)

001: MGLVGKLQAE TLIVAPADKF HEMFSCRPHH ISNVCPEKIQ KVNLHEGEWG TSGYVIEWNY NIDGNDHVAK QIVEITDGEN KSITYKFIEG DLLKKYKSFI
101: IVVQTIPKGD ATWVHWTLEY EKLNKDIPTP IKELEFLVLV GEGVDDHLVQ A

Best Arabidopsis Sequence Match ( AT1G70830.3 )
(BLAST)

001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEEEEVAHPE TLLQFCVEVS KEIDEHLLAE
201: E

Arabidopsis Description

MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.