Factsheet for VIT_01s0011g05120.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0011g05110.t01	Wine grape	cytosol	88.74	88.74
VIT_01s0011g05070.t01	Wine grape	cytosol	39.74	81.08
VIT_01s0011g05130.t01	Wine grape	cytosol	67.55	67.55
KRH38207	Soybean	cytosol	50.99	50.33
VIT_01s0011g05150.t01	Wine grape	cytosol	45.7	50.0
VIT_01s0011g05180.t01	Wine grape	cytosol	47.68	47.68
VIT_01s0011g05170.t01	Wine grape	cytosol	19.87	46.88
KRH44771	Soybean	cytosol, mitochondrion	46.36	46.05
VIT_01s0011g05190.t01	Wine grape	cytosol	45.7	45.7
KRH13141	Soybean	cytosol	45.7	45.39
KRH32895	Soybean	cytosol	45.7	45.1
KRH07297	Soybean	cytosol	45.03	45.03
CDY09498	Canola	cytosol	42.38	43.84
CDY03712	Canola	cytosol	42.38	43.84
Bra007950.1-P	Field mustard	cytosol	42.38	43.84
KRH72121	Soybean	cytosol, vacuole	40.4	43.26
KRH44775	Soybean	cytosol, mitochondrion	43.05	42.48
AT1G70870.1	Thale cress	cytosol	37.75	41.01
KRH17964	Soybean	cytosol	41.06	40.52
KRH44774	Soybean	cytosol	40.4	40.13
KRH13115	Soybean	cytosol	39.74	39.47
CDY41462	Canola	cytosol	33.77	34.93
Bra016361.1-P	Field mustard	cytosol	30.46	34.85
CDY41464	Canola	cytosol	33.77	34.69
Bra016363.1-P	Field mustard	cytosol	33.11	34.01
CDX91697	Canola	cytosol	33.11	33.78
AT1G23120.2	Thale cress	vacuole	35.1	26.77

Protein Annotations

EntrezGene:100255942	wikigene:100255942	Gene3D:3.30.530.20	MapMan:35.1	UniProt:A5AKK0	EMBL:AM428878
InterPro:Bet_v_I/MLP	InterPro:Bet_v_I_allergen	ProteinID:CAN75773	ProteinID:CAN75773.1	ProteinID:CBI26885	ProteinID:CBI26885.3
EMBL:FN595752	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0009607	InterPro:IPR023393
EntrezGene:LOC100255942	wikigene:LOC100255942	PFAM:PF00407	PRINTS:PR00634	PANTHER:PTHR31338	SMART:SM01037
SUPFAM:SSF55961	InterPro:START-like_dom_sf	UniParc:UPI000151EC45	ArrayExpress:VIT_01s0011g05120	EnsemblPlantsGene:VIT_01s0011g05120	EnsemblPlants:VIT_01s0011g05120.t01
unigene:Vvi.9321	RefSeq:XP_002284527	RefSeq:XP_002284527.1	:	:	:

Description

No Description!

Coordinates

chr1:+:4757221..4758358

Molecular Weight (calculated)

17118.0 Da

IEP (calculated)

5.081

GRAVY (calculated)

-0.622

Length

151 amino acids

Sequence
(BLAST)

001: MALTGKLEIE TEIKAPADKF FKIFRSQAHH LPNICSDKIH KIEVHEGDWE TQGSVKHWSY TIGGNSKSIK ESVESIDEEN RSITFKVSDG EVLNDYKSYK
101: FTTQAIPKGE GCLVKWTIEY EKASEDGPDP HDYLEFAVTV TKDIESHLLN A

Best Arabidopsis Sequence Match ( AT5G28010.2 )
(BLAST)

001: MAEKVEVTTM PKSSLLGKLE VEVEIKAPAA IFYHIYAGRP HHVAKATPRN VQSCDLHDGE WGTVGSIVYW NYVHEGQAKV AKERIELVEP EKKLIKFRVI
101: EGDVMAEYKS FLITIQVTPK EGGTGSVVKW HIEYEKIDEN VPHPENLLPF FAEMTKEIDE HLLSEE

Arabidopsis Description

Polyketide cyclase/dehydrase and lipid transport superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K5S5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.