Factsheet for VIT_01s0011g05110.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0011g05120.t01	Wine grape	cytosol	88.74	88.74
VIT_01s0011g05070.t01	Wine grape	cytosol	38.41	78.38
VIT_01s0011g05130.t01	Wine grape	cytosol	62.25	62.25
KRH38207	Soybean	cytosol	47.68	47.06
VIT_01s0011g05150.t01	Wine grape	cytosol	42.38	46.38
VIT_01s0011g05180.t01	Wine grape	cytosol	44.37	44.37
KRH32895	Soybean	cytosol	44.37	43.79
VIT_01s0011g05170.t01	Wine grape	cytosol	18.54	43.75
VIT_01s0011g05190.t01	Wine grape	cytosol	43.71	43.71
KRH07297	Soybean	cytosol	43.05	43.05
KRH72121	Soybean	cytosol, vacuole	38.41	41.13
KRH13141	Soybean	cytosol	41.06	40.79
KRH44771	Soybean	cytosol, mitochondrion	41.06	40.79
CDY09498	Canola	cytosol	39.07	40.41
CDY03712	Canola	cytosol	39.07	40.41
Bra007950.1-P	Field mustard	cytosol	39.07	40.41
AT1G70870.1	Thale cress	cytosol	35.76	38.85
KRH44775	Soybean	cytosol, mitochondrion	39.07	38.56
KRH17964	Soybean	cytosol	37.09	36.6
KRH44774	Soybean	cytosol	36.42	36.18
KRH13115	Soybean	cytosol	35.1	34.87
CDY41462	Canola	cytosol	32.45	33.56
Bra016361.1-P	Field mustard	cytosol	29.14	33.33
CDY41464	Canola	cytosol	31.79	32.65
CDX91697	Canola	cytosol	31.79	32.43
Bra016363.1-P	Field mustard	cytosol	31.13	31.97
AT1G23120.2	Thale cress	vacuole	35.76	27.27

Protein Annotations

EntrezGene:100232890	wikigene:100232890	Gene3D:3.30.530.20	MapMan:35.1	UniProt:A5BAX1	EMBL:AJ237994
EMBL:AM452782	InterPro:Bet_v_I/MLP	InterPro:Bet_v_I_allergen	ProteinID:CAB85634	ProteinID:CAB85634.1	ProteinID:CAN83049
ProteinID:CAN83049.1	ProteinID:CBI26886	ProteinID:CBI26886.3	EMBL:FN595752	GO:GO:0006950	GO:GO:0006952
GO:GO:0008150	GO:GO:0009607	EntrezGene:GRIP61	wikigene:GRIP61	InterPro:IPR023393	PFAM:PF00407
PRINTS:PR00634	PANTHER:PTHR31338	SMART:SM01037	SUPFAM:SSF55961	InterPro:START-like_dom_sf	TIGR:TC51800
TIGR:TC60432	TIGR:TC66301	UniParc:UPI0001524321	ArrayExpress:VIT_01s0011g05110	EnsemblPlantsGene:VIT_01s0011g05110	EnsemblPlants:VIT_01s0011g05110.t01
unigene:Vvi.1807	unigene:Vvi.25583	:	:	:	:

Description

No Description!

Coordinates

chr1:+:4747830..4748946

Molecular Weight (calculated)

17105.1 Da

IEP (calculated)

4.922

GRAVY (calculated)

-0.564

Length

151 amino acids

Sequence
(BLAST)

001: MALTGKLETE TEIKAPADKF FKIFRSQAHH LPNICSDKIH KIEVHEGDWE TQGSVKHWSL TVGENSESIK ETVDQIDEEN RSITFKVLDG EVLKDYKSYK
101: FTTQAIPKGE GCLVIWTIEY EKASEGGPDP HNCLEFSVNI TKDIESHLLN A

Best Arabidopsis Sequence Match ( AT1G70890.1 )
(BLAST)

001: MAEASSLVGK LETEVEIKAS AKKFHHMFTE RPHHVSKATP DKIHGCELHE GDWGKVGSIV IWKYVHDGKL TVGKNKIEAV DPEKNLITFK VLEGDLMNEY
101: KSFAFTLQVT PKQGESGSIA HWHLEYEKIS EEVAHPETLL QFCVEISKEI DEHLLAEE

Arabidopsis Description

MLP43MLP-like protein 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.