CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 28499913

msms PMID: 28499913 doi

S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata

Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13141	Soybean	cytosol	80.26	80.26
KRH44775	Soybean	cytosol, mitochondrion	78.95	78.43
KRH44774	Soybean	cytosol	75.66	75.66
KRH13115	Soybean	cytosol	75.0	75.0
KRH17964	Soybean	cytosol	63.16	62.75
KRH07297	Soybean	cytosol	49.34	49.67
VIT_01s0011g05120.t01	Wine grape	cytosol	46.05	46.36
KRH32895	Soybean	cytosol	46.05	45.75
KRH38207	Soybean	cytosol	46.05	45.75
KRH72121	Soybean	cytosol, vacuole	42.11	45.39
VIT_01s0011g05130.t01	Wine grape	cytosol	41.45	41.72
VIT_01s0011g05110.t01	Wine grape	cytosol	40.79	41.06
VIT_01s0011g05070.t01	Wine grape	cytosol	18.42	37.84
CDY09498	Canola	cytosol	33.55	34.93
Bra007950.1-P	Field mustard	cytosol	33.55	34.93
CDY03712	Canola	cytosol	32.89	34.25
AT1G70870.1	Thale cress	cytosol	29.61	32.37
CDY41464	Canola	cytosol	30.92	31.97
Bra016363.1-P	Field mustard	cytosol	30.92	31.97
CDY41462	Canola	cytosol	29.61	30.82
Bra016361.1-P	Field mustard	cytosol	26.32	30.3
KRH13947	Soybean	cytosol	30.26	29.68
CDX91697	Canola	cytosol	27.63	28.38
KRH37979	Soybean	cytosol	26.97	26.45
KRH13946	Soybean	cytosol	26.97	26.45
AT1G23120.2	Thale cress	vacuole	29.61	22.73
KRH13944	Soybean	cytosol	19.74	21.43

Protein Annotations

EMBL:ACUP02004956	EnsemblPlants:KRH44771	EnsemblPlantsGene:GLYMA_08G230100	Gene3D:3.30.530.20	GO:GO:0006950	GO:GO:0006952
GO:GO:0008150	GO:GO:0009607	InterPro:Bet_v_I/MLP	InterPro:IPR023393	InterPro:START-like_dom_sf	PANTHER:PTHR31907
PANTHER:PTHR31907:SF2	PFAM:PF00407	ProteinID:KRH44771	ProteinID:KRH44771.1	SMART:SM01037	SUPFAM:SSF55961
UniParc:UPI00023C6802	UniProt:I1KVZ9	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:18823595..18825096

Molecular Weight (calculated)

17620.6 Da

IEP (calculated)

5.482

GRAVY (calculated)

-0.572

Length

152 amino acids

Sequence
(BLAST)

001: MSLAGKISSE IGVQATAAKW FNLFTTQLHH VQNLTDRIHG TELHHGEDWH HNESVKHWTY TIDGKVTTCK ESIESVDEEN KTINYKLFDG DIDNQFKVFK
101: LIFQAIDKEN DSAIIKWTIE YERIGEEVDP PYGYIEYVHK CTKDIDAHLL KA

Best Arabidopsis Sequence Match ( AT1G70890.1 )
(BLAST)

001: MAEASSLVGK LETEVEIKAS AKKFHHMFTE RPHHVSKATP DKIHGCELHE GDWGKVGSIV IWKYVHDGKL TVGKNKIEAV DPEKNLITFK VLEGDLMNEY
101: KSFAFTLQVT PKQGESGSIA HWHLEYEKIS EEVAHPETLL QFCVEISKEI DEHLLAEE

Arabidopsis Description

MLP43MLP-like protein 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.