Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007950.1-P | Field mustard | cytosol | 84.17 | 80.14 |
| CDY09498 | Canola | cytosol | 83.45 | 79.45 |
| CDY03712 | Canola | cytosol | 83.45 | 79.45 |
| VIT_01s0011g05070.t01 | Wine grape | cytosol | 20.86 | 39.19 |
| VIT_01s0011g05130.t01 | Wine grape | cytosol | 41.01 | 37.75 |
| VIT_01s0011g05120.t01 | Wine grape | cytosol | 41.01 | 37.75 |
| VIT_01s0011g05110.t01 | Wine grape | cytosol | 38.85 | 35.76 |
| KRH07297 | Soybean | cytosol | 35.25 | 32.45 |
| KRH38207 | Soybean | cytosol | 34.53 | 31.37 |
| KRH13141 | Soybean | cytosol | 33.09 | 30.26 |
| KRH44775 | Soybean | cytosol, mitochondrion | 33.09 | 30.07 |
| KRH32895 | Soybean | cytosol | 33.09 | 30.07 |
| KRH44774 | Soybean | cytosol | 32.37 | 29.61 |
| KRH44771 | Soybean | cytosol, mitochondrion | 32.37 | 29.61 |
| KRH17964 | Soybean | cytosol | 32.37 | 29.41 |
| AT1G70890.1 | Thale cress | cytosol | 33.09 | 29.11 |
| KRH72121 | Soybean | cytosol, vacuole | 28.78 | 28.37 |
| KRH13115 | Soybean | cytosol | 30.22 | 27.63 |
| AT1G23120.2 | Thale cress | vacuole | 37.41 | 26.26 |
| AT5G28010.2 | Thale cress | cytosol | 29.5 | 24.7 |
| AT1G70840.1 | Thale cress | cytosol | 29.5 | 23.98 |
| AT5G28000.1 | Thale cress | cytosol | 28.06 | 23.78 |
| AT1G35260.1 | Thale cress | cytosol | 25.18 | 23.03 |
| AT1G70880.1 | Thale cress | cytosol | 25.9 | 22.64 |
| AT1G35310.1 | Thale cress | cytosol | 24.46 | 22.52 |
| AT1G23130.1 | Thale cress | cytosol | 21.58 | 18.75 |
| AT1G70850.1 | Thale cress | cytosol | 32.37 | 14.24 |
| AT1G70860.2 | Thale cress | cytosol | 7.19 | 13.33 |
| AT1G70830.1 | Thale cress | cytosol | 30.22 | 12.54 |
Protein Annotations
| Gene3D:3.30.530.20 | MapMan:35.2 | EntrezGene:843424 | ProteinID:AEE35132.1 | ArrayExpress:AT1G70870 | EnsemblPlantsGene:AT1G70870 |
| RefSeq:AT1G70870 | TAIR:AT1G70870 | RefSeq:AT1G70870-TAIR-G | EnsemblPlants:AT1G70870.1 | TAIR:AT1G70870.1 | Unigene:At.52468 |
| InterPro:Bet_v_I/MLP | UniProt:F4I6Z0 | GO:GO:0003674 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 |
| GO:GO:0009607 | InterPro:IPR023393 | RefSeq:NP_177243.1 | PFAM:PF00407 | PANTHER:PTHR31338 | SMART:SM01037 |
| SUPFAM:SSF55961 | InterPro:START-like_dom_sf | UniParc:UPI0000163289 | SEG:seg | : | : |
Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I6Z0]
Coordinates
chr1:-:26721020..26721563
Molecular Weight (calculated)
15810.0 Da
IEP (calculated)
5.707
GRAVY (calculated)
-0.330
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQMAKSMIE VEINVSADMI FGKSFSKLSS LLHEHIGDGC KGTKNWTLSV DGKVEKMKER VEIDEANKSM TVFVFEGDVM ENYSSFTCNL QIIPKLHGRS
101: IARWSWEYEK LNADSPAPNK YMDFAVYLTK DIESNLLKT
101: IARWSWEYEK LNADSPAPNK YMDFAVYLTK DIESNLLKT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.