Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41465 | Canola | cytosol | 76.51 | 80.89 |
| CDY12485 | Canola | cytosol | 48.19 | 80.81 |
| CDX91696 | Canola | cytosol | 75.9 | 80.25 |
| Bra016364.1-P | Field mustard | cytosol | 75.9 | 80.25 |
| AT5G28000.1 | Thale cress | cytosol | 74.7 | 75.61 |
| CDY12484 | Canola | cytosol | 70.48 | 73.12 |
| Bra012362.1-P | Field mustard | cytosol | 69.28 | 71.88 |
| Bra012361.1-P | Field mustard | cytosol | 56.02 | 66.91 |
| AT1G70840.1 | Thale cress | cytosol | 67.47 | 65.5 |
| AT1G70890.1 | Thale cress | cytosol | 60.24 | 63.29 |
| AT1G23130.1 | Thale cress | cytosol | 56.02 | 58.12 |
| AT1G70880.1 | Thale cress | cytosol | 54.22 | 56.6 |
| AT1G35260.1 | Thale cress | cytosol | 47.59 | 51.97 |
| VIT_01s0011g05170.t01 | Wine grape | cytosol | 19.28 | 50.0 |
| AT1G35310.1 | Thale cress | cytosol | 45.18 | 49.67 |
| AT1G70860.2 | Thale cress | cytosol | 22.29 | 49.33 |
| Solyc05g046140.2.1 | Tomato | endoplasmic reticulum, extracellular | 41.57 | 46.0 |
| KRH13947 | Soybean | cytosol | 42.77 | 45.81 |
| VIT_01s0011g05190.t01 | Wine grape | cytosol | 40.36 | 44.37 |
| KRH37979 | Soybean | cytosol | 40.96 | 43.87 |
| Solyc05g046160.1.1 | Tomato | cytosol | 16.87 | 43.75 |
| Solyc04g007830.2.1 | Tomato | cytosol | 34.94 | 43.28 |
| VIT_01s0011g05150.t01 | Wine grape | cytosol | 35.54 | 42.75 |
| KRH13946 | Soybean | cytosol | 39.76 | 42.58 |
| PGSC0003DMT400073916 | Potato | cytosol | 30.12 | 41.67 |
| PGSC0003DMT400056811 | Potato | cytosol | 31.93 | 41.09 |
| PGSC0003DMT400031542 | Potato | cytosol | 37.35 | 40.52 |
| PGSC0003DMT400075925 | Potato | cytosol | 28.31 | 40.52 |
| PGSC0003DMT400022679 | Potato | cytosol | 36.75 | 40.4 |
| PGSC0003DMT400077743 | Potato | cytosol | 36.75 | 40.4 |
| PGSC0003DMT400031386 | Potato | cytosol | 36.75 | 40.4 |
| Solyc09g005500.2.1 | Tomato | extracellular | 36.75 | 40.4 |
| PGSC0003DMT400073915 | Potato | cytosol | 36.75 | 39.87 |
| VIT_01s0011g05180.t01 | Wine grape | cytosol | 36.14 | 39.74 |
| PGSC0003DMT400041455 | Potato | cytosol | 36.14 | 39.74 |
| Solyc09g014530.2.1 | Tomato | cytosol, extracellular | 35.54 | 39.33 |
| PGSC0003DMT400022721 | Potato | cytosol | 36.14 | 39.22 |
| Solyc07g008710.2.1 | Tomato | cytosol, extracellular, nucleus | 37.35 | 38.99 |
| PGSC0003DMT400021866 | Potato | cytosol | 35.54 | 38.82 |
| Solyc05g046220.1.1 | Tomato | cytosol | 22.29 | 38.54 |
| PGSC0003DMT400021868 | Potato | cytosol | 34.34 | 38.0 |
| Solyc05g046150.2.1 | Tomato | cytosol, extracellular | 34.34 | 38.0 |
| Solyc09g014540.1.1 | Tomato | cytosol | 22.89 | 37.62 |
| Solyc09g014580.2.1 | Tomato | cytosol | 34.34 | 37.5 |
| PGSC0003DMT400025429 | Potato | cytosol | 33.73 | 37.33 |
| Solyc09g014550.2.1 | Tomato | cytosol | 33.73 | 36.84 |
| Solyc01g081130.2.1 | Tomato | cytosol | 16.87 | 36.84 |
| PGSC0003DMT400004549 | Potato | cytosol | 33.73 | 36.84 |
| AT1G70850.1 | Thale cress | cytosol | 69.28 | 36.39 |
| Solyc09g005410.1.1 | Tomato | cytosol | 29.52 | 36.03 |
| Solyc09g005400.2.1 | Tomato | cytosol | 31.93 | 35.33 |
| PGSC0003DMT400041449 | Potato | cytosol | 24.1 | 35.09 |
| KRH13944 | Soybean | cytosol | 29.52 | 35.0 |
| PGSC0003DMT400025419 | Potato | cytosol | 27.71 | 34.85 |
| PGSC0003DMT400041446 | Potato | cytosol | 31.33 | 34.67 |
| Solyc09g005420.2.1 | Tomato | cytosol | 31.33 | 34.67 |
| PGSC0003DMT400025420 | Potato | cytosol | 31.33 | 34.44 |
| PGSC0003DMT400021867 | Potato | cytosol | 31.33 | 34.21 |
| AT1G70830.1 | Thale cress | cytosol | 67.47 | 33.43 |
| PGSC0003DMT400091938 | Potato | cytosol | 29.52 | 31.61 |
| Solyc09g014560.1.1 | Tomato | cytosol | 13.86 | 31.08 |
| PGSC0003DMT400059724 | Potato | cytosol | 40.36 | 31.02 |
| AT1G70870.1 | Thale cress | cytosol | 24.7 | 29.5 |
| PGSC0003DMT400044158 | Potato | cytosol | 23.49 | 27.08 |
| AT1G23120.2 | Thale cress | vacuole | 27.11 | 22.73 |
| PGSC0003DMT400075928 | Potato | cytosol | 39.76 | 22.22 |
| PGSC0003DMT400020053 | Potato | cytosol | 39.16 | 21.96 |
Protein Annotations
| Gene3D:3.30.530.20 | MapMan:35.1 | EntrezGene:832871 | ProteinID:AED93758.1 | ProteinID:ANM68770.1 | ArrayExpress:AT5G28010 |
| EnsemblPlantsGene:AT5G28010 | RefSeq:AT5G28010 | TAIR:AT5G28010 | RefSeq:AT5G28010-TAIR-G | EnsemblPlants:AT5G28010.2 | InterPro:Bet_v_I/MLP |
| UniProt:F4K5S5 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0009607 | InterPro:IPR023393 |
| RefSeq:NP_001330492.1 | RefSeq:NP_198153.1 | PFAM:PF00407 | PANTHER:PTHR31907 | PANTHER:PTHR31907:SF4 | SMART:SM01037 |
| SUPFAM:SSF55961 | InterPro:START-like_dom_sf | UniParc:UPI000016261D | : | : | : |
Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K5S5]
Coordinates
chr5:+:10024700..10026051
Molecular Weight (calculated)
18883.7 Da
IEP (calculated)
5.323
GRAVY (calculated)
-0.323
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEKVEVTTM PKSSLLGKLE VEVEIKAPAA IFYHIYAGRP HHVAKATPRN VQSCDLHDGE WGTVGSIVYW NYVHEGQAKV AKERIELVEP EKKLIKFRVI
101: EGDVMAEYKS FLITIQVTPK EGGTGSVVKW HIEYEKIDEN VPHPENLLPF FAEMTKEIDE HLLSEE
101: EGDVMAEYKS FLITIQVTPK EGGTGSVVKW HIEYEKIDEN VPHPENLLPF FAEMTKEIDE HLLSEE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.