Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12482 | Canola | cytosol | 50.0 | 64.0 |
| Bra012363.1-P | Field mustard | cytosol | 63.12 | 62.73 |
| CDY25771 | Canola | cytosol | 61.25 | 61.64 |
| AT1G70840.1 | Thale cress | cytosol | 62.5 | 58.48 |
| AT5G28010.2 | Thale cress | cytosol | 58.12 | 56.02 |
| AT1G70890.1 | Thale cress | cytosol | 53.12 | 53.8 |
| AT1G70880.1 | Thale cress | cytosol | 51.25 | 51.57 |
| AT1G35260.1 | Thale cress | cytosol | 48.12 | 50.66 |
| AT1G35310.1 | Thale cress | cytosol | 46.88 | 49.67 |
| AT5G28000.1 | Thale cress | cytosol | 49.38 | 48.17 |
| AT1G70860.2 | Thale cress | cytosol | 22.5 | 48.0 |
| VIT_01s0011g05170.t01 | Wine grape | cytosol | 18.12 | 45.31 |
| VIT_01s0011g05150.t01 | Wine grape | cytosol | 36.25 | 42.03 |
| VIT_01s0011g05190.t01 | Wine grape | cytosol | 38.12 | 40.4 |
| VIT_01s0011g05180.t01 | Wine grape | cytosol | 36.25 | 38.41 |
| PGSC0003DMT400041449 | Potato | cytosol | 26.25 | 36.84 |
| KRH13947 | Soybean | cytosol | 35.0 | 36.13 |
| Solyc01g081130.2.1 | Tomato | cytosol | 16.88 | 35.53 |
| Solyc09g014560.1.1 | Tomato | cytosol | 16.25 | 35.14 |
| Solyc05g046140.2.1 | Tomato | endoplasmic reticulum, extracellular | 31.88 | 34.0 |
| Solyc04g007830.2.1 | Tomato | cytosol | 28.12 | 33.58 |
| KRH37979 | Soybean | cytosol | 32.5 | 33.55 |
| PGSC0003DMT400022721 | Potato | cytosol | 31.88 | 33.33 |
| PGSC0003DMT400031542 | Potato | cytosol | 31.88 | 33.33 |
| PGSC0003DMT400073915 | Potato | cytosol | 31.88 | 33.33 |
| PGSC0003DMT400022679 | Potato | cytosol | 31.25 | 33.11 |
| Solyc09g005500.2.1 | Tomato | extracellular | 31.25 | 33.11 |
| PGSC0003DMT400021868 | Potato | cytosol | 30.62 | 32.67 |
| PGSC0003DMT400025419 | Potato | cytosol | 26.88 | 32.58 |
| PGSC0003DMT400031386 | Potato | cytosol | 30.62 | 32.45 |
| PGSC0003DMT400041455 | Potato | cytosol | 30.62 | 32.45 |
| Solyc09g014580.2.1 | Tomato | cytosol | 30.62 | 32.24 |
| PGSC0003DMT400025429 | Potato | cytosol | 30.0 | 32.0 |
| Solyc05g046150.2.1 | Tomato | cytosol, extracellular | 30.0 | 32.0 |
| Solyc09g005400.2.1 | Tomato | cytosol | 30.0 | 32.0 |
| PGSC0003DMT400075925 | Potato | cytosol | 23.12 | 31.9 |
| PGSC0003DMT400077743 | Potato | cytosol | 30.0 | 31.79 |
| PGSC0003DMT400025420 | Potato | cytosol | 30.0 | 31.79 |
| PGSC0003DMT400073916 | Potato | cytosol | 23.75 | 31.67 |
| KRH13946 | Soybean | cytosol | 30.62 | 31.61 |
| Solyc09g014550.2.1 | Tomato | cytosol | 30.0 | 31.58 |
| Solyc09g005420.2.1 | Tomato | cytosol | 29.38 | 31.33 |
| Solyc09g014530.2.1 | Tomato | cytosol, extracellular | 29.38 | 31.33 |
| PGSC0003DMT400021867 | Potato | cytosol | 29.38 | 30.92 |
| PGSC0003DMT400021866 | Potato | cytosol | 28.75 | 30.26 |
| PGSC0003DMT400056811 | Potato | cytosol | 24.38 | 30.23 |
| Solyc07g008710.2.1 | Tomato | cytosol, extracellular, nucleus | 30.0 | 30.19 |
| Solyc09g005410.1.1 | Tomato | cytosol | 25.62 | 30.15 |
| KRH13944 | Soybean | cytosol | 26.25 | 30.0 |
| PGSC0003DMT400041446 | Potato | cytosol | 28.12 | 30.0 |
| AT1G70850.1 | Thale cress | cytosol | 57.5 | 29.11 |
| AT1G70830.1 | Thale cress | cytosol | 60.0 | 28.66 |
| PGSC0003DMT400091938 | Potato | cytosol | 27.5 | 28.39 |
| PGSC0003DMT400004549 | Potato | cytosol | 25.62 | 26.97 |
| Solyc05g046160.1.1 | Tomato | cytosol | 10.0 | 25.0 |
| PGSC0003DMT400059724 | Potato | cytosol | 33.75 | 25.0 |
| Solyc05g046220.1.1 | Tomato | cytosol | 14.38 | 23.96 |
| Solyc09g014540.1.1 | Tomato | cytosol | 15.0 | 23.76 |
| AT1G70870.1 | Thale cress | cytosol | 18.75 | 21.58 |
| PGSC0003DMT400044158 | Potato | cytosol | 18.12 | 20.14 |
| AT1G23120.2 | Thale cress | vacuole | 22.5 | 18.18 |
| PGSC0003DMT400020053 | Potato | cytosol | 33.12 | 17.91 |
| PGSC0003DMT400075928 | Potato | cytosol | 31.88 | 17.17 |
Protein Annotations
| Gene3D:3.30.530.20 | MapMan:35.1 | EntrezGene:838921 | ProteinID:AAC00607.1 | ProteinID:AEE30343.1 | ArrayExpress:AT1G23130 |
| EnsemblPlantsGene:AT1G23130 | RefSeq:AT1G23130 | TAIR:AT1G23130 | RefSeq:AT1G23130-TAIR-G | EnsemblPlants:AT1G23130.1 | TAIR:AT1G23130.1 |
| EMBL:AY039523 | EMBL:AY052730 | Unigene:At.23930 | InterPro:Bet_v_I/MLP | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:IPR023393 | RefSeq:NP_564190.1 | UniProt:O49304 | PFAM:PF00407 |
| PO:PO:0000013 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001170 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31907 | PANTHER:PTHR31907:SF4 | SMART:SM01037 | SUPFAM:SSF55961 |
| InterPro:START-like_dom_sf | UniParc:UPI00000A5FC7 | : | : | : | : |
Description
At1g23130/T26J12_10 [Source:UniProtKB/TrEMBL;Acc:O49304]
Coordinates
chr1:+:8200321..8201246
Molecular Weight (calculated)
17860.7 Da
IEP (calculated)
6.128
GRAVY (calculated)
-0.268
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQATRQSSL QGELEVDIEI KASAKKFHHM LSGRPQDVAK ATPDIQGCAL HEGEFGKVGS VIFWNYAIDG QPKVARERIE AVDQEKNLLV LRVIDGDLTK
101: EFKSFLVTIQ ATPKLRGPGS VVKCHLKYER IDEKVAPPEK LLELFAKLTE SMDEMLLSEV
101: EFKSFLVTIQ ATPKLRGPGS VVKCHLKYER IDEKVAPPEK LLELFAKLTE SMDEMLLSEV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.