Factsheet for VIT_01s0011g05150.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_18s0001g09580.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G70830.1	VIT_18s0001g09580.t01	AT5G43080.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0011g05180.t01	Wine grape	cytosol	76.81	70.2
VIT_01s0011g05190.t01	Wine grape	cytosol	69.57	63.58
VIT_01s0011g05170.t01	Wine grape	cytosol	22.46	48.44
VIT_01s0011g05120.t01	Wine grape	cytosol	50.0	45.7
CDY09495	Canola	cytosol	51.45	44.94
PGSC0003DMT400075925	Potato	cytosol	37.68	44.83
KRH13947	Soybean	cytosol	49.28	43.87
CDY23474	Canola	cytosol	51.45	43.56
Bra007946.1-P	Field mustard	cytosol	42.75	43.07
CDX68328	Canola	cytosol	50.72	42.68
PGSC0003DMT400056811	Potato	cytosol	39.86	42.64
VIT_01s0011g05110.t01	Wine grape	cytosol	46.38	42.38
Bra003939.1-P	Field mustard	cytosol	50.0	42.33
CDY03715	Canola	cytosol	50.0	42.07
CDY65619	Canola	cytosol	50.0	42.07
Solyc05g046140.2.1	Tomato	endoplasmic reticulum, extracellular	45.65	42.0
AT1G70890.1	Thale cress	cytosol	47.83	41.77
Bra007947.1-P	Field mustard	cytosol	47.83	41.77
AT1G70840.1	Thale cress	cytosol	51.45	41.52
VIT_01s0011g05130.t01	Wine grape	cytosol	44.93	41.06
PGSC0003DMT400022679	Potato	cytosol	44.2	40.4
PGSC0003DMT400031386	Potato	cytosol	43.48	39.74
PGSC0003DMT400041455	Potato	cytosol	43.48	39.74
Solyc09g005500.2.1	Tomato	extracellular	43.48	39.74
CDY09499	Canola	cytosol	39.13	39.42
CDY12485	Canola	cytosol	28.26	39.39
Solyc09g005400.2.1	Tomato	cytosol	42.75	39.33
VIT_01s0011g05070.t01	Wine grape	cytosol	21.01	39.19
PGSC0003DMT400077743	Potato	cytosol	42.75	39.07
Solyc05g046160.1.1	Tomato	cytosol	18.12	39.06
KRH37979	Soybean	cytosol	43.48	38.71
Solyc05g046220.1.1	Tomato	cytosol	26.81	38.54
Solyc04g007830.2.1	Tomato	cytosol	36.96	38.06
PGSC0003DMT400025429	Potato	cytosol	41.3	38.0
PGSC0003DMT400025419	Potato	cytosol	36.23	37.88
CDY12482	Canola	cytosol	34.06	37.6
Solyc05g046150.2.1	Tomato	cytosol, extracellular	40.58	37.33
AT1G70880.1	Thale cress	cytosol	42.75	37.11
Bra016180.1-P	Field mustard	cytosol	36.96	36.96
CDX72752	Canola	cytosol	36.96	36.96
Bra016364.1-P	Field mustard	cytosol	42.03	36.94
CDX91696	Canola	cytosol	42.03	36.94
CDY41465	Canola	cytosol	42.03	36.94
PGSC0003DMT400021867	Potato	cytosol	40.58	36.84
Bra016179.1-P	Field mustard	cytosol	39.13	36.73
Bra016178.1-P	Field mustard	cytosol	42.03	36.71
CDX72753	Canola	cytosol	42.03	36.71
PGSC0003DMT400073916	Potato	cytosol	31.88	36.67
CDY03713	Canola	cytosol	40.58	36.36
AT1G23130.1	Thale cress	cytosol	42.03	36.25
Solyc09g014550.2.1	Tomato	cytosol	39.86	36.18
Solyc09g005410.1.1	Tomato	cytosol	35.51	36.03
Solyc09g005420.2.1	Tomato	cytosol	39.13	36.0
PGSC0003DMT400031542	Potato	cytosol	39.86	35.95
PGSC0003DMT400073915	Potato	cytosol	39.86	35.95
Bra012362.1-P	Field mustard	cytosol	41.3	35.62
CDY12484	Canola	cytosol	41.3	35.62
AT5G28010.2	Thale cress	cytosol	42.75	35.54
Solyc01g081130.2.1	Tomato	cytosol	19.57	35.53
PGSC0003DMT400022721	Potato	cytosol	39.13	35.29
PGSC0003DMT400025420	Potato	cytosol	38.41	35.1
KRH13946	Soybean	cytosol	39.13	34.84
Bra016181.1-P	Field mustard	cytosol	34.78	34.78
CDX96283	Canola	cytosol	34.78	34.78
AT1G70860.2	Thale cress	cytosol	18.84	34.67
PGSC0003DMT400021868	Potato	cytosol	37.68	34.67
PGSC0003DMT400041446	Potato	cytosol	37.68	34.67
AT1G35260.1	Thale cress	cytosol	37.68	34.21
PGSC0003DMT400021866	Potato	cytosol	37.68	34.21
PGSC0003DMT400041449	Potato	cytosol	28.26	34.21
Solyc09g014580.2.1	Tomato	cytosol	37.68	34.21
CDY70076	Canola	cytosol	35.51	33.79
Bra024564.1-P	Field mustard	cytosol	44.2	33.52
CDY21418	Canola	cytosol	44.2	33.52
Solyc09g014530.2.1	Tomato	cytosol, extracellular	36.23	33.33
CDY68859	Canola	cytosol	34.78	33.1
PGSC0003DMT400091938	Potato	cytosol	36.96	32.9
PGSC0003DMT400004549	Potato	cytosol	36.23	32.89
KRH13944	Soybean	cytosol	33.33	32.86
Solyc07g008710.2.1	Tomato	cytosol, extracellular, nucleus	37.68	32.7
Bra016182.1-P	Field mustard	cytosol	49.28	32.69
Bra012361.1-P	Field mustard	cytosol	32.61	32.37
AT5G28000.1	Thale cress	cytosol	37.68	31.71
CDY12480	Canola	cytosol	36.96	31.68
CDY00801	Canola	cytosol	40.58	31.64
AT1G35310.1	Thale cress	cytosol	34.06	31.13
CDX89696	Canola	cytosol	34.06	31.13
Bra016362.1-P	Field mustard	cytosol	36.23	31.06
CDY41463	Canola	cytosol	36.23	31.06
CDY17433	Canola	cytosol	33.33	30.46
Bra012363.1-P	Field mustard	cytosol	35.51	30.43
CDY25771	Canola	cytosol	34.78	30.19
Bra007945.1-P	Field mustard	cytosol	50.0	30.13
CDY03718	Canola	cytosol	50.0	30.13
CDY09492	Canola	cytosol	50.0	30.13
Solyc09g014560.1.1	Tomato	cytosol	15.94	29.73
CDY16542	Canola	cytosol	28.99	29.63
PGSC0003DMT400059724	Potato	cytosol	46.38	29.63
Bra012364.1-P	Field mustard	cytosol	34.06	29.56
CDY25772	Canola	cytosol	34.06	29.56
Bra002309.1-P	Field mustard	cytosol	28.26	28.89
CDX92456	Canola	cytosol	28.26	28.89
Solyc09g014540.1.1	Tomato	cytosol	21.01	28.71
PGSC0003DMT400044158	Potato	cytosol	29.71	28.47
Bra007949.1-P	Field mustard	cytosol	47.83	26.19
AT1G70850.1	Thale cress	cytosol	52.9	23.1
CDX96282	Canola	cytosol	20.29	22.95
PGSC0003DMT400020053	Potato	cytosol	47.83	22.3
PGSC0003DMT400075928	Potato	cytosol	47.83	22.22
AT1G70830.1	Thale cress	cytosol	48.55	20.0
CDY11541	Canola	cytosol	20.29	18.06

Protein Annotations

EntrezGene:100267971	wikigene:100267971	Gene3D:3.30.530.20	MapMan:35.1	InterPro:Bet_v_I/MLP	ProteinID:CBI26883
ProteinID:CBI26883.3	UniProt:D7T8R2	EMBL:FN595752	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0009607	InterPro:IPR023393	EntrezGene:LOC100267971	wikigene:LOC100267971	PFAM:PF00407	PANTHER:PTHR31907
PANTHER:PTHR31907:SF4	SMART:SM01037	SUPFAM:SSF55961	InterPro:START-like_dom_sf	TIGR:TC63197	UniParc:UPI0001BE2E57
ArrayExpress:VIT_01s0011g05150	EnsemblPlantsGene:VIT_01s0011g05150	EnsemblPlants:VIT_01s0011g05150.t01	unigene:Vvi.12365	RefSeq:XP_002284570	RefSeq:XP_002284570.1

Description

No Description!

Coordinates

chr1:+:4790444..4792233

Molecular Weight (calculated)

15831.8 Da

IEP (calculated)

5.962

GRAVY (calculated)

-0.256

Length

138 amino acids

Sequence
(BLAST)

001: MASADKFHEI FWCRPHHISN VCPAKIQKVH LHEGEWGTSG SVIQWHYNID GNDHVAKEIV EAIDEENKSV TFKVIEGDLM KEYKSFRIIV QAIPKGDATY
101: VHWTLEYEKL NKDVLAPIKI LGFVVHVSED IDDHLVQA

Best Arabidopsis Sequence Match ( AT1G70850.1 )
(BLAST)

001: MAKTEAPSLV GKLETEVEIK ASAGQFHHMF AGKPHHVSKA SPGNIQSCDL HEGDWGTVGS IVFWNYVHDG EAKVAKERIE AVEPEKNLIT FRVIEGDLMK
101: EYKSFLITIQ VTPKHGGPGS IVHWHLEYEK ISDEVAHPET LLQFCVEVSQ EIDEHLLSEE EEVKTTETLE TEVEIKASAE KFHHMFAGKP HHVSKATPGN
201: IQSCDLHEGD WGTVGSIVFW NYVHDGEAKV AKERIEAVDP EKNLITFRVI EGDLMKEYKS FVITIQVTPK HGGSGSVVHW HFEYEKINEE VAHPETLLQF
301: AVEVSKEIDE HLLAEE

Arabidopsis Description

MLP34MLP-like protein 34 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.