Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 4
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0011g05120.t01 | Wine grape | cytosol | 81.08 | 39.74 |
| VIT_01s0011g05110.t01 | Wine grape | cytosol | 78.38 | 38.41 |
| VIT_01s0011g05130.t01 | Wine grape | cytosol | 51.35 | 25.17 |
| KRH38207 | Soybean | cytosol | 44.59 | 21.57 |
| VIT_01s0011g05150.t01 | Wine grape | cytosol | 39.19 | 21.01 |
| AT1G70870.1 | Thale cress | cytosol | 39.19 | 20.86 |
| Bra007950.1-P | Field mustard | cytosol | 40.54 | 20.55 |
| CDY03712 | Canola | cytosol | 40.54 | 20.55 |
| CDY09498 | Canola | cytosol | 40.54 | 20.55 |
| KRH13141 | Soybean | cytosol | 41.89 | 20.39 |
| VIT_01s0011g05180.t01 | Wine grape | cytosol | 40.54 | 19.87 |
| VIT_01s0011g05190.t01 | Wine grape | cytosol | 37.84 | 18.54 |
| KRH44771 | Soybean | cytosol, mitochondrion | 37.84 | 18.42 |
| CDY41464 | Canola | cytosol | 36.49 | 18.37 |
| Bra016363.1-P | Field mustard | cytosol | 36.49 | 18.37 |
| KRH32895 | Soybean | cytosol | 37.84 | 18.3 |
| KRH44775 | Soybean | cytosol, mitochondrion | 37.84 | 18.3 |
| Bra016361.1-P | Field mustard | cytosol | 32.43 | 18.18 |
| KRH07297 | Soybean | cytosol | 36.49 | 17.88 |
| CDY41462 | Canola | cytosol | 33.78 | 17.12 |
| KRH44774 | Soybean | cytosol | 35.14 | 17.11 |
| KRH72121 | Soybean | cytosol, vacuole | 32.43 | 17.02 |
| CDX91697 | Canola | cytosol | 33.78 | 16.89 |
| KRH13115 | Soybean | cytosol | 32.43 | 15.79 |
| KRH17964 | Soybean | cytosol | 32.43 | 15.69 |
| AT1G23120.2 | Thale cress | vacuole | 39.19 | 14.65 |
| VIT_01s0011g05170.t01 | Wine grape | cytosol | 4.05 | 4.69 |
Protein Annotations
| ArrayExpress:VIT_01s0011g05070 | EMBL:FN595752 | EnsemblPlants:VIT_01s0011g05070.t01 | EnsemblPlantsGene:VIT_01s0011g05070 | Gene3D:3.30.530.20 | GO:GO:0006950 |
| GO:GO:0006952 | GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf |
| PANTHER:PTHR31338 | PFAM:PF00407 | ProteinID:CCB50823 | ProteinID:CCB50823.1 | SMART:SM01037 | SUPFAM:SSF55961 |
| UniParc:UPI000210878A | UniProt:F6HFH4 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr1:+:4725725..4726431
Molecular Weight (calculated)
8318.8 Da
IEP (calculated)
5.093
GRAVY (calculated)
-0.673
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: MKKTGPSRSV LDGEVLKDYK SYKFTTQAIP KGEGCLVKWT AEYEKASEDG PDPRDYLELT VNVIKDIESH LLNA
001: MAGVQTLELE IQVNMTAERF FKTFKKKEGN FTDKTEAVYV HRDDPTSNSS IQIWNFIVDG KMEQIKEKID VDEENKSVSF LALEGDVLKQ YKSYKITLDV
101: VPKDHKVCIA KWTWEYEKLN DDVPPPTRYT AFVEDYTRDL ETRLLSES
101: VPKDHKVCIA KWTWEYEKLN DDVPPPTRYT AFVEDYTRDL ETRLLSES
Arabidopsis Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein [Source:TAIR;Acc:AT1G23120]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.