Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41462 | Canola | cytosol | 92.57 | 93.84 |
| CDY41464 | Canola | cytosol | 82.43 | 82.99 |
| AT1G23120.2 | Thale cress | vacuole | 78.38 | 58.59 |
| CDY09498 | Canola | cytosol | 37.16 | 37.67 |
| CDY03712 | Canola | cytosol | 36.49 | 36.99 |
| VIT_01s0011g05070.t01 | Wine grape | cytosol | 16.89 | 33.78 |
| VIT_01s0011g05120.t01 | Wine grape | cytosol | 33.78 | 33.11 |
| VIT_01s0011g05110.t01 | Wine grape | cytosol | 32.43 | 31.79 |
| VIT_01s0011g05130.t01 | Wine grape | cytosol | 31.76 | 31.13 |
| KRH32895 | Soybean | cytosol | 31.08 | 30.07 |
| CDX91696 | Canola | cytosol | 31.76 | 29.94 |
| CDY41465 | Canola | cytosol | 31.08 | 29.3 |
| CDY12485 | Canola | cytosol | 19.59 | 29.29 |
| KRH44774 | Soybean | cytosol | 29.05 | 28.29 |
| CDX72752 | Canola | cytosol | 26.35 | 28.26 |
| KRH44771 | Soybean | cytosol, mitochondrion | 28.38 | 27.63 |
| KRH17964 | Soybean | cytosol | 27.7 | 26.8 |
| KRH07297 | Soybean | cytosol | 27.03 | 26.49 |
| KRH13141 | Soybean | cytosol | 27.03 | 26.32 |
| KRH72121 | Soybean | cytosol, vacuole | 25.0 | 26.24 |
| CDY23474 | Canola | cytosol | 28.38 | 25.77 |
| KRH13115 | Soybean | cytosol | 26.35 | 25.66 |
| CDY12484 | Canola | cytosol | 27.7 | 25.62 |
| CDX68328 | Canola | cytosol | 28.38 | 25.61 |
| KRH38207 | Soybean | cytosol | 26.35 | 25.49 |
| CDY65619 | Canola | cytosol | 27.7 | 25.0 |
| KRH44775 | Soybean | cytosol, mitochondrion | 25.68 | 24.84 |
| CDY09495 | Canola | cytosol | 26.35 | 24.68 |
| CDX72753 | Canola | cytosol | 26.35 | 24.68 |
| CDX89696 | Canola | cytosol | 25.0 | 24.5 |
| CDY03715 | Canola | cytosol | 27.03 | 24.39 |
| CDY21418 | Canola | cytosol | 29.73 | 24.18 |
| CDX96283 | Canola | cytosol | 22.3 | 23.91 |
| CDY17433 | Canola | cytosol | 23.65 | 23.18 |
| CDY09499 | Canola | cytosol | 20.95 | 22.63 |
| CDY70076 | Canola | cytosol | 21.62 | 22.07 |
| CDY00801 | Canola | cytosol | 25.68 | 21.47 |
| CDY03713 | Canola | cytosol | 22.3 | 21.43 |
| CDY12480 | Canola | cytosol | 22.97 | 21.12 |
| CDY68859 | Canola | cytosol | 20.27 | 20.69 |
| CDY41463 | Canola | cytosol | 21.62 | 19.88 |
| CDY12482 | Canola | cytosol | 16.22 | 19.2 |
| CDY25772 | Canola | cytosol | 19.59 | 18.24 |
| CDX92456 | Canola | cytosol | 16.22 | 17.78 |
| CDY25771 | Canola | cytosol | 18.92 | 17.61 |
| CDY03718 | Canola | cytosol | 27.03 | 17.47 |
| CDY16542 | Canola | cytosol | 15.54 | 17.04 |
| CDY09492 | Canola | cytosol | 26.35 | 17.03 |
| CDX96282 | Canola | cytosol | 8.78 | 10.66 |
| CDY11541 | Canola | cytosol | 8.78 | 8.39 |
Protein Annotations
| EnsemblPlants:CDX91697 | EnsemblPlantsGene:GSBRNA2T00153184001 | Gene3D:3.30.530.20 | GO:A0A078DS17 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31338 |
| PFAM:PF00407 | ProteinID:CDX91697 | ProteinID:CDX91697.1 | SEG:seg | SMART:SM01037 | SUPFAM:SSF55961 |
| UniParc:UPI0004EDCE7C | MapMan:35.2 | : | : | : | : |
Description
BnaC08g06160D
Coordinates
chrLK031869:+:283883..284438
Molecular Weight (calculated)
17150.2 Da
IEP (calculated)
4.277
GRAVY (calculated)
-0.495
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGIETLDLE IQVNMPADRF FNSFKNKKGS FTDKTEAVSI YHDDTNYNSS IQIWNLIVDG KMEQIKEKTE VDEENMSVSF LAMEGDVLEQ YKSYKITLDV
101: VPRDDGVCIA KWKWEYEKLN VDVPPPTKYI AFVADYTREL ETRLLSES
101: VPRDDGVCIA KWKWEYEKLN VDVPPPTKYI AFVADYTREL ETRLLSES
001: MLIKKLLRIR HLPCLPLFLF SSLGFLLYAF CYGKDKQQKS QRERLDYLRA MAGVQTLELE IQVNMTAERF FKTFKKKEGN FTDKTEAVYV HRDDPTSNSS
101: IQIWNFIVDG KMEQIKEKID VDEENKSVSF LALEGDVLKQ YKSYKITLDV VPKDHKVCIA KWTWEYEKLN DDVPPPTRYT AFVEDYTRDL ETRLLSES
101: IQIWNFIVDG KMEQIKEKID VDEENKSVSF LALEGDVLKQ YKSYKITLDV VPKDHKVCIA KWTWEYEKLN DDVPPPTRYT AFVEDYTRDL ETRLLSES
Arabidopsis Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein [Source:TAIR;Acc:AT1G23120]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.