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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY22369

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70830.1 CDY22369 AT5G43080.1 20706207
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68328 Canola cytosol 96.32 95.73
Bra003939.1-P Field mustard cytosol 95.71 95.71
CDY03715 Canola cytosol 91.41 90.85
CDY65619 Canola cytosol 90.8 90.24
CDY09495 Canola cytosol 83.44 86.08
CDY12485 Canola cytosol 44.17 72.73
CDY09499 Canola cytosol 60.12 71.53
CDX72753 Canola cytosol 65.03 67.09
CDY41465 Canola cytosol 64.42 66.88
CDX91696 Canola cytosol 63.19 65.61
CDX72752 Canola cytosol 53.99 63.77
CDY70076 Canola cytosol 56.44 63.45
CDY03713 Canola cytosol 59.51 62.99
CDX96283 Canola cytosol 52.76 62.32
CDY00801 Canola cytosol 67.48 62.15
CDY03718 Canola cytosol 86.5 61.57
CDY09492 Canola cytosol 85.28 60.7
CDY21418 Canola cytosol 67.48 60.44
CDY41463 Canola cytosol 59.51 60.25
CDY68859 Canola cytosol 52.76 59.31
CDY12480 Canola cytosol 58.28 59.01
CDY12484 Canola cytosol 57.67 58.75
VIT_01s0011g05170.t01 Wine grape cytosol 22.7 57.81
CDX89696 Canola cytosol 50.92 54.97
CDY17433 Canola cytosol 49.69 53.64
CDY12482 Canola cytosol 41.1 53.6
CDY25772 Canola cytosol 52.15 53.46
CDY25771 Canola cytosol 51.53 52.83
VIT_01s0011g05150.t01 Wine grape cytosol 43.56 51.45
VIT_01s0011g05190.t01 Wine grape cytosol 47.24 50.99
CDY16542 Canola cytosol 41.1 49.63
CDX92456 Canola cytosol 39.26 47.41
VIT_01s0011g05180.t01 Wine grape cytosol 42.33 45.7
KRH13947 Soybean cytosol 42.94 45.16
KRH37979 Soybean cytosol 42.33 44.52
CDX96282 Canola cytosol 31.9 42.62
AT1G70830.1 Thale cress cytosol 84.05 40.9
KRH13946 Soybean cytosol 38.04 40.0
PGSC0003DMT400022679 Potato cytosol 36.81 39.74
PGSC0003DMT400031386 Potato cytosol 36.81 39.74
Solyc04g007830.2.1 Tomato cytosol 32.52 39.55
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 36.2 39.33
Solyc09g005500.2.1 Tomato extracellular 36.2 39.07
PGSC0003DMT400077743 Potato cytosol 36.2 39.07
PGSC0003DMT400041455 Potato cytosol 36.2 39.07
Solyc05g046160.1.1 Tomato cytosol 15.34 39.06
PGSC0003DMT400056811 Potato cytosol 30.06 37.98
PGSC0003DMT400075925 Potato cytosol 26.99 37.93
PGSC0003DMT400031542 Potato cytosol 35.58 37.91
PGSC0003DMT400022721 Potato cytosol 34.97 37.25
PGSC0003DMT400073915 Potato cytosol 34.97 37.25
Solyc05g046150.2.1 Tomato cytosol, extracellular 33.74 36.67
KRH13944 Soybean cytosol 31.29 36.43
PGSC0003DMT400025429 Potato cytosol 32.52 35.33
Solyc09g005410.1.1 Tomato cytosol 29.45 35.29
PGSC0003DMT400025420 Potato cytosol 32.52 35.1
CDY11541 Canola cytosol 33.13 34.84
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 33.74 34.59
PGSC0003DMT400041449 Potato cytosol 23.93 34.21
Solyc09g014530.2.1 Tomato cytosol, extracellular 31.29 34.0
Solyc09g014560.1.1 Tomato cytosol 15.34 33.78
Solyc09g014550.2.1 Tomato cytosol 31.29 33.55
Solyc09g014580.2.1 Tomato cytosol 31.29 33.55
PGSC0003DMT400021867 Potato cytosol 31.29 33.55
PGSC0003DMT400073916 Potato cytosol 24.54 33.33
Solyc05g046220.1.1 Tomato cytosol 19.63 33.33
Solyc09g005400.2.1 Tomato cytosol 30.67 33.33
PGSC0003DMT400021868 Potato cytosol 30.67 33.33
Solyc09g005420.2.1 Tomato cytosol 30.67 33.33
PGSC0003DMT400021866 Potato cytosol 30.67 32.89
PGSC0003DMT400041446 Potato cytosol 30.06 32.67
PGSC0003DMT400091938 Potato cytosol 30.67 32.26
CDY03712 Canola cytosol 28.83 32.19
PGSC0003DMT400025419 Potato cytosol 25.77 31.82
Solyc01g081130.2.1 Tomato cytosol 14.72 31.58
CDY09498 Canola cytosol 28.22 31.51
CDY41464 Canola cytosol 28.22 31.29
CDY41462 Canola cytosol 26.99 30.14
PGSC0003DMT400059724 Potato cytosol 38.65 29.17
PGSC0003DMT400004549 Potato cytosol 26.99 28.95
CDX91697 Canola cytosol 25.77 28.38
Solyc09g014540.1.1 Tomato cytosol 16.56 26.73
PGSC0003DMT400044158 Potato cytosol 19.63 22.22
PGSC0003DMT400020053 Potato cytosol 38.65 21.28
PGSC0003DMT400075928 Potato cytosol 37.42 20.54
Protein Annotations
EnsemblPlants:CDY23474EnsemblPlantsGene:GSBRNA2T00022093001Gene3D:3.30.530.20GO:A0A078GDP2GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PANTHER:PTHR31907:SF4PFAM:PF00407ProteinID:CDY23474ProteinID:CDY23474.1SMART:SM01037SUPFAM:SSF55961
UniParc:UPI0004EF36F5UniProt:A0A078GDP2MapMan:35.1:::
Description
BnaC06g24430DBnaC06g24430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDP2]
Coordinates
chrLK032144:+:55920..57935
Molecular Weight (calculated)
18304.9 Da
IEP (calculated)
6.281
GRAVY (calculated)
-0.321
Length
163 amino acids
Sequence
(BLAST)
001: MAEAATTKAS TLVGKLETDV EIKASAGKFH HMFAGRPHHV SKASPGKIKA CDLHEGDWGK VGSIVYWNYV HGKKIYVAKE RIEAVEPEKN LITFRVIEGD
101: LMKEYKSFLI TIQVTPKHGG PGSIVHWHLE YEKISDEVAH PETLLQFCVE VSEEIDEHLL SEE
Best Arabidopsis Sequence Match ( AT1G70850.1 )
(BLAST)
001: MAKTEAPSLV GKLETEVEIK ASAGQFHHMF AGKPHHVSKA SPGNIQSCDL HEGDWGTVGS IVFWNYVHDG EAKVAKERIE AVEPEKNLIT FRVIEGDLMK
101: EYKSFLITIQ VTPKHGGPGS IVHWHLEYEK ISDEVAHPET LLQFCVEVSQ EIDEHLLSEE EEVKTTETLE TEVEIKASAE KFHHMFAGKP HHVSKATPGN
201: IQSCDLHEGD WGTVGSIVFW NYVHDGEAKV AKERIEAVDP EKNLITFRVI EGDLMKEYKS FVITIQVTPK HGGSGSVVHW HFEYEKINEE VAHPETLLQF
301: AVEVSKEIDE HLLAEE
Arabidopsis Description
MLP34MLP-like protein 34 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.