Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDY22369 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G70830.1 | CDY22369 | AT5G43080.1 | 20706207 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03718 | Canola | cytosol | 98.69 | 98.69 |
| CDY03715 | Canola | cytosol | 62.45 | 87.2 |
| CDY65619 | Canola | cytosol | 62.01 | 86.59 |
| CDX68328 | Canola | cytosol | 61.14 | 85.37 |
| CDY23474 | Canola | cytosol | 60.7 | 85.28 |
| CDY09495 | Canola | cytosol | 57.21 | 82.91 |
| CDY00801 | Canola | cytosol | 62.88 | 81.36 |
| CDY09499 | Canola | cytosol | 42.36 | 70.8 |
| CDY12485 | Canola | cytosol | 30.57 | 70.71 |
| CDY41465 | Canola | cytosol | 45.85 | 66.88 |
| CDX72753 | Canola | cytosol | 44.54 | 64.56 |
| CDX91696 | Canola | cytosol | 44.1 | 64.33 |
| CDX72752 | Canola | cytosol | 38.43 | 63.77 |
| CDX96283 | Canola | cytosol | 37.99 | 63.04 |
| CDY12484 | Canola | cytosol | 43.23 | 61.88 |
| CDY03713 | Canola | cytosol | 41.48 | 61.69 |
| CDY70076 | Canola | cytosol | 38.43 | 60.69 |
| CDY21418 | Canola | cytosol | 47.6 | 59.89 |
| CDY41463 | Canola | cytosol | 41.92 | 59.63 |
| CDY12480 | Canola | cytosol | 41.05 | 58.39 |
| CDY68859 | Canola | cytosol | 35.81 | 56.55 |
| CDY25772 | Canola | cytosol | 38.43 | 55.35 |
| CDY12482 | Canola | cytosol | 30.13 | 55.2 |
| CDX89696 | Canola | cytosol | 35.37 | 53.64 |
| CDY25771 | Canola | cytosol | 37.12 | 53.46 |
| CDX96282 | Canola | cytosol | 27.95 | 52.46 |
| CDY17433 | Canola | cytosol | 34.5 | 52.32 |
| VIT_01s0011g05170.t01 | Wine grape | cytosol | 14.41 | 51.56 |
| VIT_01s0011g05150.t01 | Wine grape | cytosol | 30.13 | 50.0 |
| CDY16542 | Canola | cytosol | 29.26 | 49.63 |
| VIT_01s0011g05190.t01 | Wine grape | cytosol | 31.88 | 48.34 |
| AT1G70830.1 | Thale cress | cytosol | 70.31 | 48.06 |
| KRH37979 | Soybean | cytosol | 32.31 | 47.74 |
| CDX92456 | Canola | cytosol | 27.51 | 46.67 |
| KRH13947 | Soybean | cytosol | 31.44 | 46.45 |
| CDY11541 | Canola | cytosol | 30.13 | 44.52 |
| VIT_01s0011g05180.t01 | Wine grape | cytosol | 29.26 | 44.37 |
| KRH13946 | Soybean | cytosol | 28.38 | 41.94 |
| PGSC0003DMT400031542 | Potato | cytosol | 27.51 | 41.18 |
| PGSC0003DMT400041455 | Potato | cytosol | 27.07 | 41.06 |
| PGSC0003DMT400022679 | Potato | cytosol | 27.07 | 41.06 |
| Solyc05g046140.2.1 | Tomato | endoplasmic reticulum, extracellular | 26.64 | 40.67 |
| PGSC0003DMT400025429 | Potato | cytosol | 26.64 | 40.67 |
| PGSC0003DMT400022721 | Potato | cytosol | 27.07 | 40.52 |
| PGSC0003DMT400073915 | Potato | cytosol | 27.07 | 40.52 |
| PGSC0003DMT400077743 | Potato | cytosol | 26.64 | 40.4 |
| PGSC0003DMT400031386 | Potato | cytosol | 26.64 | 40.4 |
| Solyc09g005500.2.1 | Tomato | extracellular | 26.64 | 40.4 |
| PGSC0003DMT400041449 | Potato | cytosol | 20.09 | 40.35 |
| Solyc04g007830.2.1 | Tomato | cytosol | 23.58 | 40.3 |
| PGSC0003DMT400056811 | Potato | cytosol | 22.27 | 39.53 |
| Solyc05g046150.2.1 | Tomato | cytosol, extracellular | 25.76 | 39.33 |
| Solyc05g046160.1.1 | Tomato | cytosol | 10.92 | 39.06 |
| Solyc09g005410.1.1 | Tomato | cytosol | 23.14 | 38.97 |
| Solyc09g014550.2.1 | Tomato | cytosol | 25.76 | 38.82 |
| PGSC0003DMT400075925 | Potato | cytosol | 19.65 | 38.79 |
| Solyc09g014530.2.1 | Tomato | cytosol, extracellular | 25.33 | 38.67 |
| PGSC0003DMT400021868 | Potato | cytosol | 25.33 | 38.67 |
| PGSC0003DMT400025419 | Potato | cytosol | 22.27 | 38.64 |
| KRH13944 | Soybean | cytosol | 23.58 | 38.57 |
| PGSC0003DMT400025420 | Potato | cytosol | 25.33 | 38.41 |
| Solyc07g008710.2.1 | Tomato | cytosol, extracellular, nucleus | 26.64 | 38.36 |
| Solyc09g014580.2.1 | Tomato | cytosol | 25.33 | 38.16 |
| Solyc01g081130.2.1 | Tomato | cytosol | 12.66 | 38.16 |
| PGSC0003DMT400021867 | Potato | cytosol | 25.33 | 38.16 |
| Solyc09g005420.2.1 | Tomato | cytosol | 24.89 | 38.0 |
| Solyc09g005400.2.1 | Tomato | cytosol | 24.89 | 38.0 |
| Solyc09g014560.1.1 | Tomato | cytosol | 12.23 | 37.84 |
| PGSC0003DMT400073916 | Potato | cytosol | 19.65 | 37.5 |
| PGSC0003DMT400021866 | Potato | cytosol | 24.45 | 36.84 |
| PGSC0003DMT400041446 | Potato | cytosol | 23.58 | 36.0 |
| PGSC0003DMT400091938 | Potato | cytosol | 23.14 | 34.19 |
| Solyc05g046220.1.1 | Tomato | cytosol | 13.97 | 33.33 |
| PGSC0003DMT400004549 | Potato | cytosol | 21.83 | 32.89 |
| CDY03712 | Canola | cytosol | 19.65 | 30.82 |
| CDY09498 | Canola | cytosol | 19.21 | 30.14 |
| PGSC0003DMT400059724 | Potato | cytosol | 28.38 | 30.09 |
| Solyc09g014540.1.1 | Tomato | cytosol | 12.66 | 28.71 |
| CDY41464 | Canola | cytosol | 18.34 | 28.57 |
| CDY41462 | Canola | cytosol | 17.9 | 28.08 |
| CDX91697 | Canola | cytosol | 17.03 | 26.35 |
| PGSC0003DMT400044158 | Potato | cytosol | 14.85 | 23.61 |
| PGSC0003DMT400020053 | Potato | cytosol | 28.82 | 22.3 |
| PGSC0003DMT400075928 | Potato | cytosol | 26.64 | 20.54 |
Protein Annotations
| EnsemblPlants:CDY09492 | EnsemblPlantsGene:GSBRNA2T00031036001 | Gene3D:3.30.530.20 | GO:A0A078F8S4 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31907 |
| PANTHER:PTHR31907:SF4 | PFAM:PF00407 | ProteinID:CDY09492 | ProteinID:CDY09492.1 | SEG:seg | SMART:SM01037 |
| SUPFAM:SSF55961 | UniParc:UPI0004EEF9DA | UniProt:A0A078F8S4 | MapMan:35.1 | : | : |
Description
BnaC02g20340DBnaC02g20340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8S4]
Coordinates
chrLK031996:-:547091..548299
Molecular Weight (calculated)
25358.2 Da
IEP (calculated)
5.213
GRAVY (calculated)
-0.312
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MADVATEIAK KMEEKAEPSV TVAPTKTVEA ATAEEAETKV MVAPPKAVEA TNKSAEDEVK PTETSSLVGK LETDVEIKAS AGQFHHMFTW KPHHVSKASP
101: GNIQGCDLHE GDWGKPGSII LWNYVHGKLT LLYIFSLYGE AKVAKERIEA VEPEKNLITF RVIEGDLMKE YKSFLLTIQV TPKHGGAGSI VHWHLEYEKI
201: SDEVAHPETL LQFCVEVSKE IDEHLLAKE
101: GNIQGCDLHE GDWGKPGSII LWNYVHGKLT LLYIFSLYGE AKVAKERIEA VEPEKNLITF RVIEGDLMKE YKSFLLTIQV TPKHGGAGSI VHWHLEYEKI
201: SDEVAHPETL LQFCVEVSKE IDEHLLAKE
001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEEEEVAHPE TLLQFCVEVS KEIDEHLLAE
201: E
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEEEEVAHPE TLLQFCVEVS KEIDEHLLAE
201: E
Arabidopsis Description
MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.