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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY41465 Canola cytosol 85.86 54.14
CDX91696 Canola cytosol 84.85 53.5
Bra012361.1-P Field mustard cytosol 74.75 53.24
AT5G28010.2 Thale cress cytosol 80.81 48.19
CDY12484 Canola cytosol 71.72 44.38
CDY09495 Canola cytosol 70.71 44.3
CDY23474 Canola cytosol 72.73 44.17
CDX68328 Canola cytosol 71.72 43.29
CDY03715 Canola cytosol 70.71 42.68
CDY65619 Canola cytosol 70.71 42.68
AT5G28000.1 Thale cress cytosol 70.71 42.68
CDY09499 Canola cytosol 55.56 40.15
CDY41463 Canola cytosol 61.62 37.89
CDY12480 Canola cytosol 61.62 37.89
CDY12482 Canola cytosol 47.47 37.6
CDX72753 Canola cytosol 58.59 36.71
CDX96283 Canola cytosol 50.51 36.23
CDX72752 Canola cytosol 50.51 36.23
CDY21418 Canola cytosol 65.66 35.71
CDY70076 Canola cytosol 51.52 35.17
CDY00801 Canola cytosol 62.63 35.03
CDY25772 Canola cytosol 55.56 34.59
CDY03713 Canola cytosol 53.54 34.42
CDY25771 Canola cytosol 54.55 33.96
PGSC0003DMT400075925 Potato cytosol 39.39 33.62
CDY68859 Canola cytosol 46.46 31.72
CDY03718 Canola cytosol 71.72 31.0
CDY09492 Canola cytosol 70.71 30.57
CDX89696 Canola cytosol 46.46 30.46
CDY17433 Canola cytosol 46.46 30.46
VIT_01s0011g05190.t01 Wine grape cytosol 43.43 28.48
VIT_01s0011g05150.t01 Wine grape cytosol 39.39 28.26
Solyc05g046160.1.1 Tomato cytosol 18.18 28.12
PGSC0003DMT400031386 Potato cytosol 42.42 27.81
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 41.41 27.33
Solyc05g046220.1.1 Tomato cytosol 26.26 27.08
PGSC0003DMT400022679 Potato cytosol 39.39 25.83
PGSC0003DMT400056811 Potato cytosol 33.33 25.58
Solyc05g046150.2.1 Tomato cytosol, extracellular 38.38 25.33
VIT_01s0011g05180.t01 Wine grape cytosol 38.38 25.17
KRH13947 Soybean cytosol 39.39 25.16
Solyc04g007830.2.1 Tomato cytosol 33.33 24.63
KRH13946 Soybean cytosol 38.38 24.52
Solyc09g005500.2.1 Tomato extracellular 37.37 24.5
PGSC0003DMT400077743 Potato cytosol 37.37 24.5
PGSC0003DMT400041455 Potato cytosol 37.37 24.5
CDY16542 Canola cytosol 33.33 24.44
KRH37979 Soybean cytosol 37.37 23.87
Solyc09g014540.1.1 Tomato cytosol 24.24 23.76
CDX92456 Canola cytosol 32.32 23.7
Solyc01g081130.2.1 Tomato cytosol 18.18 23.68
PGSC0003DMT400073916 Potato cytosol 28.28 23.33
PGSC0003DMT400031542 Potato cytosol 33.33 21.57
Solyc09g014530.2.1 Tomato cytosol, extracellular 32.32 21.33
CDY41464 Canola cytosol 31.31 21.09
Solyc09g014580.2.1 Tomato cytosol 32.32 21.05
PGSC0003DMT400021866 Potato cytosol 32.32 21.05
PGSC0003DMT400073915 Potato cytosol 32.32 20.91
PGSC0003DMT400059724 Potato cytosol 45.45 20.83
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 33.33 20.75
KRH13944 Soybean cytosol 29.29 20.71
PGSC0003DMT400022721 Potato cytosol 31.31 20.26
CDY41462 Canola cytosol 29.29 19.86
Solyc09g014550.2.1 Tomato cytosol 30.3 19.74
PGSC0003DMT400004549 Potato cytosol 30.3 19.74
CDX91697 Canola cytosol 29.29 19.59
PGSC0003DMT400091938 Potato cytosol 30.3 19.35
PGSC0003DMT400021868 Potato cytosol 29.29 19.33
PGSC0003DMT400041449 Potato cytosol 22.22 19.3
CDX96282 Canola cytosol 23.23 18.85
PGSC0003DMT400044158 Potato cytosol 27.27 18.75
VIT_01s0011g05170.t01 Wine grape cytosol 12.12 18.75
PGSC0003DMT400021867 Potato cytosol 28.28 18.42
PGSC0003DMT400025419 Potato cytosol 24.24 18.18
Solyc09g005420.2.1 Tomato cytosol 27.27 18.0
PGSC0003DMT400025429 Potato cytosol 27.27 18.0
CDY03712 Canola cytosol 26.26 17.81
CDY09498 Canola cytosol 26.26 17.81
Solyc09g005400.2.1 Tomato cytosol 26.26 17.33
Solyc09g005410.1.1 Tomato cytosol 23.23 16.91
PGSC0003DMT400025420 Potato cytosol 25.25 16.56
CDY11541 Canola cytosol 25.25 16.13
PGSC0003DMT400041446 Potato cytosol 24.24 16.0
PGSC0003DMT400020053 Potato cytosol 44.44 14.86
PGSC0003DMT400075928 Potato cytosol 42.42 14.14
Solyc09g014560.1.1 Tomato cytosol 10.1 13.51
Protein Annotations
EnsemblPlants:CDY12485EnsemblPlantsGene:GSBRNA2T00061795001Gene3D:3.30.530.20GO:A0A078FDM8GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PANTHER:PTHR31907:SF4PFAM:PF00407ProteinID:CDY12485ProteinID:CDY12485.1SMART:SM01037SUPFAM:SSF55961
UniParc:UPI0004EEF4ABUniProt:A0A078FDM8MapMan:35.1:::
Description
BnaC07g13250DBnaC07g13250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDM8]
Coordinates
chrLK032023:-:218414..218954
Molecular Weight (calculated)
11191.4 Da
IEP (calculated)
4.681
GRAVY (calculated)
-0.420
Length
99 amino acids
Sequence
(BLAST)
1: MAESSSLLGE LEACDLHDGE WGTVGNGKAK VAKDRIEVVE PEKKLIKFKV LEGDLMEEFK SFLITIQVTP KQGGNGSIVK RHFEYKKIDE IDEHLLFEE
Best Arabidopsis Sequence Match ( AT5G28010.1 )
(BLAST)
001: MAEKVEVTTM PKSSLLGKLE VEVEIKAPAA IFYHIYAGRP HHVAKATPRN VQSCDLHDGE WGTVGSIVYW NYVHEGQAKV AKERIELVEP EKKLIKFRVI
101: EGDVMAEYKS FLITIQVTPK EGGTGSVVKW HIEYEKIDEN VPHPENLLPF FAEMTKEIDE HLLSEE
Arabidopsis Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K5S5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.