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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400030176
PGSC0003DMT400030222
PGSC0003DMT400055428

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70830.1 PGSC0003DMT400030176 AT5G43080.1 20706207
AT1G70830.1 PGSC0003DMT400030222 AT5G43080.1 20706207
AT1G70830.1 PGSC0003DMT400055428 AT5G43080.1 20706207
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400075925 Potato cytosol 41.2 76.72
PGSC0003DMT400031386 Potato cytosol 51.39 73.51
PGSC0003DMT400020053 Potato cytosol 96.3 70.27
PGSC0003DMT400075928 Potato cytosol 77.78 56.57
VIT_01s0011g05170.t01 Wine grape cytosol 15.74 53.12
PGSC0003DMT400031542 Potato cytosol 34.26 48.37
PGSC0003DMT400056811 Potato cytosol 28.24 47.29
PGSC0003DMT400073915 Potato cytosol 33.33 47.06
PGSC0003DMT400022679 Potato cytosol 32.87 47.02
PGSC0003DMT400041455 Potato cytosol 32.87 47.02
PGSC0003DMT400022721 Potato cytosol 32.87 46.41
VIT_01s0011g05150.t01 Wine grape cytosol 29.63 46.38
PGSC0003DMT400077743 Potato cytosol 32.41 46.36
VIT_01s0011g05190.t01 Wine grape cytosol 32.41 46.36
CDY12485 Canola cytosol 20.83 45.45
PGSC0003DMT400025429 Potato cytosol 30.09 43.33
PGSC0003DMT400073916 Potato cytosol 24.07 43.33
KRH13947 Soybean cytosol 31.02 43.23
VIT_01s0011g05180.t01 Wine grape cytosol 30.09 43.05
PGSC0003DMT400041449 Potato cytosol 22.69 42.98
PGSC0003DMT400021866 Potato cytosol 30.09 42.76
PGSC0003DMT400021868 Potato cytosol 29.63 42.67
PGSC0003DMT400025419 Potato cytosol 25.93 42.42
AT1G70890.1 Thale cress cytosol 31.02 42.41
PGSC0003DMT400025420 Potato cytosol 29.63 42.38
Bra016364.1-P Field mustard cytosol 30.09 41.4
CDY41465 Canola cytosol 30.09 41.4
PGSC0003DMT400004549 Potato cytosol 28.7 40.79
CDX91696 Canola cytosol 29.63 40.76
Bra007947.1-P Field mustard cytosol 29.63 40.51
AT5G28010.2 Thale cress cytosol 31.02 40.36
Bra007946.1-P Field mustard cytosol 25.46 40.15
CDY09495 Canola cytosol 29.17 39.87
CDY65619 Canola cytosol 30.09 39.63
CDY03715 Canola cytosol 30.09 39.63
PGSC0003DMT400041446 Potato cytosol 27.31 39.33
PGSC0003DMT400021867 Potato cytosol 27.31 38.82
Bra012362.1-P Field mustard cytosol 28.7 38.75
PGSC0003DMT400091938 Potato cytosol 27.78 38.71
AT1G70860.2 Thale cress cytosol 13.43 38.67
Bra003939.1-P Field mustard cytosol 29.17 38.65
CDY23474 Canola cytosol 29.17 38.65
AT5G28000.1 Thale cress cytosol 29.17 38.41
CDX68328 Canola cytosol 29.17 38.41
AT1G70840.1 Thale cress cytosol 30.09 38.01
CDY12484 Canola cytosol 27.78 37.5
KRH37979 Soybean cytosol 26.39 36.77
KRH13946 Soybean cytosol 26.39 36.77
Bra012361.1-P Field mustard cytosol 23.61 36.69
AT1G70880.1 Thale cress cytosol 26.39 35.85
CDY09499 Canola cytosol 22.69 35.77
Bra016179.1-P Field mustard cytosol 24.07 35.37
Bra016178.1-P Field mustard cytosol 25.0 34.18
CDY03713 Canola cytosol 24.07 33.77
AT1G23130.1 Thale cress cytosol 25.0 33.75
CDX72753 Canola cytosol 24.54 33.54
CDY25772 Canola cytosol 24.54 33.33
Bra012364.1-P Field mustard cytosol 24.54 33.33
CDY21418 Canola cytosol 27.78 32.97
Bra024564.1-P Field mustard cytosol 27.78 32.97
CDY12482 Canola cytosol 18.98 32.8
PGSC0003DMT400044158 Potato cytosol 21.76 32.64
CDY12480 Canola cytosol 24.07 32.3
CDY41463 Canola cytosol 24.07 32.3
Bra016362.1-P Field mustard cytosol 24.07 32.3
AT1G35260.1 Thale cress cytosol 22.69 32.24
AT1G35310.1 Thale cress cytosol 22.22 31.79
Bra016182.1-P Field mustard cytosol 30.09 31.25
Bra016180.1-P Field mustard cytosol 19.91 31.16
CDY00801 Canola cytosol 25.0 30.51
CDX89696 Canola cytosol 21.3 30.46
CDX72752 Canola cytosol 19.44 30.43
CDY70076 Canola cytosol 20.37 30.34
CDY17433 Canola cytosol 20.83 29.8
Bra016181.1-P Field mustard cytosol 18.98 29.71
CDX96283 Canola cytosol 18.98 29.71
CDY68859 Canola cytosol 19.91 29.66
CDY09492 Canola cytosol 30.09 28.38
Bra007945.1-P Field mustard cytosol 30.09 28.38
CDY03718 Canola cytosol 30.09 28.38
CDY25771 Canola cytosol 20.37 27.67
Bra012363.1-P Field mustard cytosol 20.37 27.33
KRH13944 Soybean cytosol 17.59 27.14
CDX92456 Canola cytosol 15.74 25.19
CDY16542 Canola cytosol 15.74 25.19
Bra002309.1-P Field mustard cytosol 15.74 25.19
CDX96282 Canola cytosol 13.43 23.77
Bra007949.1-P Field mustard cytosol 26.39 22.62
CDY11541 Canola cytosol 15.28 21.29
AT1G70850.1 Thale cress cytosol 28.7 19.62
AT1G70830.1 Thale cress cytosol 29.63 19.1
Protein Annotations
EnsemblPlants:PGSC0003DMT400059724EnsemblPlantsGene:PGSC0003DMG400023221Gene3D:3.30.530.20GO:GO:0006950GO:GO:0006952GO:GO:0008150
GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907PANTHER:PTHR31907:SF4
PFAM:PF00407PGSC:PGSC0003DMG400023221SMART:SM01037SUPFAM:SSF55961UniParc:UPI0002960414UniProt:M1C4N2
MapMan:35.1:::::
Description
MLP 34 [Source:PGSC_GENE;Acc:PGSC0003DMG400023221]
Coordinates
chr00:-:22629286..22632091
Molecular Weight (calculated)
24876.3 Da
IEP (calculated)
5.288
GRAVY (calculated)
-0.419
Length
216 amino acids
Sequence
(BLAST)
001: MSLEGKLVSE INIKCDGDVF HEIFRHRPHH ISTMSSDKVQ NVDIHEGEWG IVGSVIFWNF TDNIETHHLT GKLVSEINIK SDGDVFHEIF RYRPHHISSM
101: SPGYIQNVDI HEGEWGTVGS VIVWNFTHDG KEKVAKNVIE EIDEEKKLVK FKVTGGDILE DYNSFYVTVH VDTKGEDNIV TWILEYEKKN CNVPDPHTLM
201: ELCLNITKDI ETHHLN
Best Arabidopsis Sequence Match ( AT1G70830.5 )
(BLAST)
001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEE
Arabidopsis Description
MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.