CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007947.1-P	Field mustard	cytosol	97.81	84.81
CDY09495	Canola	cytosol	72.26	62.66
CDY65619	Canola	cytosol	73.72	61.59
CDY03715	Canola	cytosol	73.72	61.59
CDY23474	Canola	cytosol	71.53	60.12
CDX68328	Canola	cytosol	70.8	59.15
CDY00801	Canola	cytosol	72.99	56.5
CDY70076	Canola	cytosol	59.12	55.86
CDX72752	Canola	cytosol	56.2	55.8
CDY12485	Canola	cytosol	40.15	55.56
CDX96283	Canola	cytosol	55.47	55.07
CDX72753	Canola	cytosol	60.58	52.53
CDY68859	Canola	cytosol	55.47	52.41
CDX91696	Canola	cytosol	59.12	51.59
CDY41465	Canola	cytosol	59.12	51.59
CDY21418	Canola	cytosol	65.69	49.45
CDY12480	Canola	cytosol	54.01	45.96
CDY25772	Canola	cytosol	53.28	45.91
CDY41463	Canola	cytosol	52.55	44.72
CDY03713	Canola	cytosol	49.63	44.16
CDY12484	Canola	cytosol	51.09	43.75
CDY03718	Canola	cytosol	71.53	42.79
CDY12482	Canola	cytosol	38.69	42.4
CDX89696	Canola	cytosol	46.72	42.38
CDY09492	Canola	cytosol	70.8	42.36
CDY17433	Canola	cytosol	45.99	41.72
CDY25771	Canola	cytosol	48.18	41.51
VIT_01s0011g05150.t01	Wine grape	cytosol	39.42	39.13
VIT_01s0011g05190.t01	Wine grape	cytosol	40.15	36.42
Solyc05g046160.1.1	Tomato	cytosol	16.79	35.94
Solyc04g007830.2.1	Tomato	cytosol	35.04	35.82
VIT_01s0011g05180.t01	Wine grape	cytosol	39.42	35.76
PGSC0003DMT400022679	Potato	cytosol	39.42	35.76
PGSC0003DMT400041455	Potato	cytosol	38.69	35.1
KRH13947	Soybean	cytosol	39.42	34.84
KRH37979	Soybean	cytosol	39.42	34.84
Solyc09g005500.2.1	Tomato	extracellular	37.23	33.77
PGSC0003DMT400075925	Potato	cytosol	28.47	33.62
PGSC0003DMT400077743	Potato	cytosol	36.5	33.11
CDY16542	Canola	cytosol	32.12	32.59
Solyc05g046220.1.1	Tomato	cytosol	22.63	32.29
KRH13946	Soybean	cytosol	36.5	32.26
CDX92456	Canola	cytosol	31.39	31.85
PGSC0003DMT400031542	Potato	cytosol	35.04	31.37
PGSC0003DMT400031386	Potato	cytosol	34.31	31.13
PGSC0003DMT400073915	Potato	cytosol	34.31	30.72
PGSC0003DMT400022721	Potato	cytosol	34.31	30.72
Solyc05g046140.2.1	Tomato	endoplasmic reticulum, extracellular	33.58	30.67
Solyc09g014530.2.1	Tomato	cytosol, extracellular	33.58	30.67
PGSC0003DMT400056811	Potato	cytosol	28.47	30.23
Solyc05g046150.2.1	Tomato	cytosol, extracellular	32.85	30.0
PGSC0003DMT400021868	Potato	cytosol	32.85	30.0
Solyc09g014540.1.1	Tomato	cytosol	21.9	29.7
VIT_01s0011g05170.t01	Wine grape	cytosol	13.87	29.69
Solyc09g014550.2.1	Tomato	cytosol	32.85	29.61
Solyc07g008710.2.1	Tomato	cytosol, extracellular, nucleus	34.31	29.56
CDX96282	Canola	cytosol	26.28	29.51
PGSC0003DMT400073916	Potato	cytosol	25.55	29.17
PGSC0003DMT400021867	Potato	cytosol	32.12	28.95
PGSC0003DMT400025429	Potato	cytosol	31.39	28.67
PGSC0003DMT400091938	Potato	cytosol	32.12	28.39
PGSC0003DMT400041449	Potato	cytosol	23.36	28.07
PGSC0003DMT400025419	Potato	cytosol	27.01	28.03
Solyc09g005420.2.1	Tomato	cytosol	29.93	27.33
Solyc09g014580.2.1	Tomato	cytosol	29.93	26.97
PGSC0003DMT400021866	Potato	cytosol	29.93	26.97
CDY09498	Canola	cytosol	28.47	26.71
CDY03712	Canola	cytosol	28.47	26.71
Solyc09g005400.2.1	Tomato	cytosol	29.2	26.67
PGSC0003DMT400004549	Potato	cytosol	29.2	26.32
PGSC0003DMT400025420	Potato	cytosol	28.47	25.83
PGSC0003DMT400041446	Potato	cytosol	27.74	25.33
CDY11541	Canola	cytosol	28.47	25.16
KRH13944	Soybean	cytosol	25.55	25.0
Solyc01g081130.2.1	Tomato	cytosol	13.87	25.0
Solyc09g005410.1.1	Tomato	cytosol	24.09	24.26
PGSC0003DMT400059724	Potato	cytosol	35.77	22.69
CDY41464	Canola	cytosol	24.09	22.45
Solyc09g014560.1.1	Tomato	cytosol	11.68	21.62
PGSC0003DMT400044158	Potato	cytosol	22.63	21.53
CDX91697	Canola	cytosol	22.63	20.95
CDY41462	Canola	cytosol	21.9	20.55
PGSC0003DMT400020053	Potato	cytosol	36.5	16.89
PGSC0003DMT400075928	Potato	cytosol	34.31	15.82

Protein Annotations

Gene3D:3.30.530.20	MapMan:35.1	GO:A0A078F925	UniProt:A0A078F925	InterPro:Bet_v_I/MLP	EnsemblPlants:CDY09499
ProteinID:CDY09499	ProteinID:CDY09499.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009607
EnsemblPlantsGene:GSBRNA2T00031049001	InterPro:IPR023393	PFAM:PF00407	PANTHER:PTHR31907	PANTHER:PTHR31907:SF4	SMART:SM01037
SUPFAM:SSF55961	InterPro:START-like_dom_sf	UniParc:UPI0004EE422A	:	:	:

Description

BnaC02g20410DBnaC02g20410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F925]

Coordinates

chrLK031996:-:623293..624329

Molecular Weight (calculated)

15605.8 Da

IEP (calculated)

5.501

GRAVY (calculated)

-0.435

Length

137 amino acids

Sequence
(BLAST)

001: MAEPSCLLGK LEIEVEIKAS AEKFHHMFAE RPHHIPKATP GHIKGYGEPK VAKDIIEAVD QEKNLFKMRV IEGDLMKEYK NFVLTIQATP KHEGSGSIVH
101: WHIEYEKISE EVAHPETLVQ LLTEMSQGID EHLLTEE

Best Arabidopsis Sequence Match ( AT1G70830.1 )
(BLAST)

001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEEEEVKTPE TPSLVGKLET DVEIKASAEK
201: FHHMFAGKPH HVSKASPGNI QGCDLHEGDW GQVGSIVFWN YVHDREAKVA KERIEAVEPN KNLITFRVID GDLMKEYKSF LLTIQVTPKL GGPGSIVHWH
301: LEYEKISEEV AHPETLLQFC VEVSKEIDEH LLAEE

Arabidopsis Description

MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.