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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY23474 Canola cytosol 86.08 83.44
CDX68328 Canola cytosol 86.08 82.93
CDY65619 Canola cytosol 85.44 82.32
CDY03715 Canola cytosol 85.44 82.32
AT1G70890.1 Thale cress cytosol 77.22 77.22
CDY03713 Canola cytosol 71.52 73.38
CDY09499 Canola cytosol 62.66 72.26
CDY12485 Canola cytosol 44.3 70.71
CDX72753 Canola cytosol 70.25 70.25
CDY41465 Canola cytosol 65.19 65.61
CDX72752 Canola cytosol 56.96 65.22
CDX91696 Canola cytosol 64.56 64.97
CDY70076 Canola cytosol 59.49 64.83
CDX96283 Canola cytosol 55.7 63.77
CDY68859 Canola cytosol 55.7 60.69
CDY00801 Canola cytosol 67.72 60.45
CDY41463 Canola cytosol 60.76 59.63
CDY21418 Canola cytosol 67.72 58.79
CDY12484 Canola cytosol 59.49 58.75
CDY03718 Canola cytosol 84.18 58.08
CDY09492 Canola cytosol 82.91 57.21
CDY12480 Canola cytosol 58.23 57.14
Bra007949.1-P Field mustard cytosol 89.87 56.35
CDY25772 Canola cytosol 54.43 54.09
CDY17433 Canola cytosol 51.27 53.64
CDX89696 Canola cytosol 51.27 53.64
CDY12482 Canola cytosol 41.77 52.8
CDY25771 Canola cytosol 52.53 52.2
VIT_01s0011g05170.t01 Wine grape cytosol 20.89 51.56
VIT_01s0011g05150.t01 Wine grape cytosol 44.94 51.45
CDY16542 Canola cytosol 43.04 50.37
VIT_01s0011g05190.t01 Wine grape cytosol 46.2 48.34
CDX92456 Canola cytosol 40.51 47.41
KRH13947 Soybean cytosol 46.2 47.1
VIT_01s0011g05180.t01 Wine grape cytosol 43.67 45.7
KRH37979 Soybean cytosol 44.3 45.16
PGSC0003DMT400056811 Potato cytosol 34.18 41.86
CDX96282 Canola cytosol 32.28 41.8
Solyc09g005500.2.1 Tomato extracellular 39.24 41.06
PGSC0003DMT400022679 Potato cytosol 38.61 40.4
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 37.97 40.0
PGSC0003DMT400077743 Potato cytosol 37.97 39.74
PGSC0003DMT400041455 Potato cytosol 37.97 39.74
PGSC0003DMT400075925 Potato cytosol 29.11 39.66
KRH13946 Soybean cytosol 38.61 39.35
Solyc05g046160.1.1 Tomato cytosol 15.82 39.06
Solyc04g007830.2.1 Tomato cytosol 32.91 38.81
PGSC0003DMT400031386 Potato cytosol 36.71 38.41
Solyc09g014550.2.1 Tomato cytosol 36.71 38.16
PGSC0003DMT400025429 Potato cytosol 36.08 38.0
PGSC0003DMT400022721 Potato cytosol 36.71 37.91
PGSC0003DMT400073915 Potato cytosol 36.71 37.91
Solyc09g005400.2.1 Tomato cytosol 35.44 37.33
PGSC0003DMT400031542 Potato cytosol 36.08 37.25
Solyc09g014530.2.1 Tomato cytosol, extracellular 34.81 36.67
KRH13944 Soybean cytosol 32.28 36.43
Solyc05g046150.2.1 Tomato cytosol, extracellular 34.18 36.0
PGSC0003DMT400021868 Potato cytosol 34.18 36.0
PGSC0003DMT400021867 Potato cytosol 34.18 35.53
Solyc09g005410.1.1 Tomato cytosol 30.38 35.29
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 35.44 35.22
PGSC0003DMT400025420 Potato cytosol 33.54 35.1
PGSC0003DMT400041449 Potato cytosol 25.32 35.09
Solyc09g014580.2.1 Tomato cytosol 33.54 34.87
PGSC0003DMT400021866 Potato cytosol 33.54 34.87
Solyc05g046220.1.1 Tomato cytosol 20.89 34.38
Solyc01g081130.2.1 Tomato cytosol 16.46 34.21
PGSC0003DMT400073916 Potato cytosol 25.95 34.17
Solyc09g005420.2.1 Tomato cytosol 32.28 34.0
Solyc09g014560.1.1 Tomato cytosol 15.82 33.78
PGSC0003DMT400091938 Potato cytosol 32.91 33.55
PGSC0003DMT400041446 Potato cytosol 31.65 33.33
PGSC0003DMT400025419 Potato cytosol 27.85 33.33
CDY11541 Canola cytosol 32.28 32.9
CDY03712 Canola cytosol 29.75 32.19
PGSC0003DMT400004549 Potato cytosol 30.38 31.58
CDY09498 Canola cytosol 28.48 30.82
CDY41464 Canola cytosol 27.22 29.25
PGSC0003DMT400059724 Potato cytosol 39.87 29.17
Solyc09g014540.1.1 Tomato cytosol 18.35 28.71
CDY41462 Canola cytosol 25.95 28.08
PGSC0003DMT400044158 Potato cytosol 24.05 26.39
CDX91697 Canola cytosol 24.68 26.35
PGSC0003DMT400020053 Potato cytosol 41.14 21.96
PGSC0003DMT400075928 Potato cytosol 38.61 20.54
Protein Annotations
EnsemblPlants:CDY09495EnsemblPlantsGene:GSBRNA2T00031042001Gene3D:3.30.530.20GO:A0A078F4V4GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PANTHER:PTHR31907:SF4PFAM:PF00407ProteinID:CDY09495ProteinID:CDY09495.1SMART:SM01037SUPFAM:SSF55961
UniParc:UPI0004EEBBC5UniProt:A0A078F4V4MapMan:35.1:::
Description
BnaC02g20370DBnaC02g20370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F4V4]
Coordinates
chrLK031996:-:577149..578157
Molecular Weight (calculated)
17700.1 Da
IEP (calculated)
5.752
GRAVY (calculated)
-0.363
Length
158 amino acids
Sequence
(BLAST)
001: MAEASTLVGK LETDVEIKAS AGKFHHMFAG RPHHVSKATP GNIQNCELHE GNWGKVGSVV IWNYSMNGEA KVAKERVEAV EPEKNLITFR VVEGDLMKEY
101: KSFVITIQVT PKHGGPGSVV HWHLEYEKIS DEVAHPETLL QFCVEISKEI DEHLLNEE
Best Arabidopsis Sequence Match ( AT1G70850.1 )
(BLAST)
001: MAKTEAPSLV GKLETEVEIK ASAGQFHHMF AGKPHHVSKA SPGNIQSCDL HEGDWGTVGS IVFWNYVHDG EAKVAKERIE AVEPEKNLIT FRVIEGDLMK
101: EYKSFLITIQ VTPKHGGPGS IVHWHLEYEK ISDEVAHPET LLQFCVEVSQ EIDEHLLSEE EEVKTTETLE TEVEIKASAE KFHHMFAGKP HHVSKATPGN
201: IQSCDLHEGD WGTVGSIVFW NYVHDGEAKV AKERIEAVDP EKNLITFRVI EGDLMKEYKS FVITIQVTPK HGGSGSVVHW HFEYEKINEE VAHPETLLQF
301: AVEVSKEIDE HLLAEE
Arabidopsis Description
MLP34MLP-like protein 34 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.