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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc04g078310.2.1
Solyc12g088470.1.1
Solyc12g088500.1.1
Solyc12g088520.1.1
Solyc12g088530.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70830.1 Solyc04g078310.2.1 AT5G43080.1 20706207
AT1G70830.1 Solyc12g088470.1.1 AT5G43080.1 20706207
AT1G70830.1 Solyc12g088500.1.1 AT5G43080.1 20706207
AT1G70830.1 Solyc12g088520.1.1 AT5G43080.1 20706207
AT1G70830.1 Solyc12g088530.1.1 AT5G43080.1 20706207
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc09g005410.1.1 Tomato cytosol 82.67 91.18
PGSC0003DMT400025419 Potato cytosol 76.0 86.36
Solyc09g005400.2.1 Tomato cytosol 83.33 83.33
Solyc09g014550.2.1 Tomato cytosol 80.67 79.61
Solyc09g014530.2.1 Tomato cytosol, extracellular 78.67 78.67
Solyc09g014560.1.1 Tomato cytosol 36.0 72.97
Solyc09g014580.2.1 Tomato cytosol 72.0 71.05
Solyc01g081130.2.1 Tomato cytosol 34.67 68.42
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 62.67 59.12
Solyc09g014540.1.1 Tomato cytosol 36.67 54.46
VIT_01s0011g05170.t01 Wine grape cytosol 20.67 48.44
Solyc09g005500.2.1 Tomato extracellular 44.67 44.37
Solyc04g007830.2.1 Tomato cytosol 38.67 43.28
VIT_01s0011g05190.t01 Wine grape cytosol 42.67 42.38
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 41.33 41.33
Solyc05g046160.1.1 Tomato cytosol 17.33 40.62
Solyc05g046150.2.1 Tomato cytosol, extracellular 40.0 40.0
VIT_01s0011g05150.t01 Wine grape cytosol 36.0 39.13
VIT_01s0011g05180.t01 Wine grape cytosol 39.33 39.07
Solyc05g046220.1.1 Tomato cytosol 24.0 37.5
AT1G70890.1 Thale cress cytosol 38.0 36.08
AT1G70860.2 Thale cress cytosol 17.33 34.67
CDY65619 Canola cytosol 36.0 32.93
CDY03715 Canola cytosol 36.0 32.93
CDX89696 Canola cytosol 32.67 32.45
CDY09495 Canola cytosol 34.0 32.28
Bra007946.1-P Field mustard cytosol 29.33 32.12
Bra016180.1-P Field mustard cytosol 29.33 31.88
Bra007947.1-P Field mustard cytosol 33.33 31.65
KRH13947 Soybean cytosol 32.67 31.61
AT1G35260.1 Thale cress cytosol 32.0 31.58
AT1G70840.1 Thale cress cytosol 36.0 31.58
AT5G28010.2 Thale cress cytosol 34.67 31.33
Bra003939.1-P Field mustard cytosol 34.0 31.29
CDY12484 Canola cytosol 33.33 31.25
Bra012362.1-P Field mustard cytosol 33.33 31.25
CDX91696 Canola cytosol 32.67 31.21
CDX96283 Canola cytosol 28.67 31.16
CDX72752 Canola cytosol 28.67 31.16
Bra016181.1-P Field mustard cytosol 28.67 31.16
AT1G35310.1 Thale cress cytosol 31.33 31.13
CDY17433 Canola cytosol 31.33 31.13
CDX68328 Canola cytosol 34.0 31.1
KRH37979 Soybean cytosol 32.0 30.97
CDY23474 Canola cytosol 33.33 30.67
CDY41465 Canola cytosol 32.0 30.57
Bra016364.1-P Field mustard cytosol 32.0 30.57
AT1G70880.1 Thale cress cytosol 32.0 30.19
CDY09499 Canola cytosol 27.33 29.93
Bra012364.1-P Field mustard cytosol 31.33 29.56
CDY25772 Canola cytosol 31.33 29.56
AT1G23130.1 Thale cress cytosol 31.33 29.38
CDY03713 Canola cytosol 30.0 29.22
CDY12480 Canola cytosol 30.67 28.57
CDY00801 Canola cytosol 33.33 28.25
CDX92456 Canola cytosol 25.33 28.15
CDY16542 Canola cytosol 25.33 28.15
AT5G28000.1 Thale cress cytosol 30.67 28.05
Bra016179.1-P Field mustard cytosol 27.33 27.89
Bra016182.1-P Field mustard cytosol 38.67 27.88
Bra016178.1-P Field mustard cytosol 29.33 27.85
KRH13946 Soybean cytosol 28.67 27.74
Bra002309.1-P Field mustard cytosol 24.67 27.41
CDY12485 Canola cytosol 18.0 27.27
CDX72753 Canola cytosol 28.67 27.22
Bra024564.1-P Field mustard cytosol 32.67 26.92
CDY21418 Canola cytosol 32.67 26.92
KRH13944 Soybean cytosol 24.67 26.43
CDY41463 Canola cytosol 28.0 26.09
Bra016362.1-P Field mustard cytosol 28.0 26.09
Bra012361.1-P Field mustard cytosol 24.0 25.9
Bra007945.1-P Field mustard cytosol 38.0 24.89
CDY03718 Canola cytosol 38.0 24.89
CDY09492 Canola cytosol 38.0 24.89
CDY12482 Canola cytosol 20.67 24.8
CDX96282 Canola cytosol 19.33 23.77
CDY25771 Canola cytosol 24.0 22.64
Bra012363.1-P Field mustard cytosol 24.0 22.36
CDY70076 Canola cytosol 21.33 22.07
CDY68859 Canola cytosol 20.0 20.69
CDY11541 Canola cytosol 20.67 20.0
Bra007949.1-P Field mustard cytosol 31.33 18.65
AT1G70850.1 Thale cress cytosol 38.0 18.04
AT1G70830.1 Thale cress cytosol 36.67 16.42
Protein Annotations
EnsemblPlants:Solyc09g005420.2.1EnsemblPlantsGene:Solyc09g005420.2Gene3D:3.30.530.20GO:GO:0006950GO:GO:0006952GO:GO:0008150
GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907PANTHER:PTHR31907:SF4
PFAM:PF00407SMART:SM01037SUPFAM:SSF55961UniParc:UPI000276B114UniProt:K4CQ32MapMan:35.1
Description
No Description!
Coordinates
chr9:-:304321..305404
Molecular Weight (calculated)
17084.4 Da
IEP (calculated)
4.674
GRAVY (calculated)
-0.289
Length
150 amino acids
Sequence
(BLAST)
001: MGLKSVLCAK IEMKADKDVF HDVFTNKPHH VSTMSPLHVQ GFDLLEGDLG TVGSKICWTY TLDGEKRISK QILEDVDHEN KVLVLKEFEG DIIDKYDSFK
101: ATLHIETKDE IDLITWTLEY ERPNETVPEL ISLLDFVVGM TKGIDDHHAN
Best Arabidopsis Sequence Match ( AT1G70830.5 )
(BLAST)
001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEE
Arabidopsis Description
MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.