CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016362.1-P	Field mustard	cytosol	100.0	100.0
CDY12480	Canola	cytosol	78.26	78.26
CDY25772	Canola	cytosol	73.91	74.84
CDY12485	Canola	cytosol	37.89	61.62
CDY03715	Canola	cytosol	62.73	61.59
CDY65619	Canola	cytosol	62.11	60.98
CDY09495	Canola	cytosol	59.63	60.76
CDY23474	Canola	cytosol	60.25	59.51
CDX91696	Canola	cytosol	57.76	59.24
CDX68328	Canola	cytosol	60.25	59.15
CDY41465	Canola	cytosol	57.14	58.6
CDY12482	Canola	cytosol	43.48	56.0
CDY25771	Canola	cytosol	55.28	55.97
CDY09499	Canola	cytosol	44.72	52.55
CDX72753	Canola	cytosol	51.55	52.53
CDY12484	Canola	cytosol	52.17	52.5
CDY21418	Canola	cytosol	57.76	51.1
CDY70076	Canola	cytosol	44.72	49.66
CDX72752	Canola	cytosol	42.24	49.28
CDX96283	Canola	cytosol	42.24	49.28
CDY17433	Canola	cytosol	45.96	49.01
CDX89696	Canola	cytosol	45.34	48.34
CDY00801	Canola	cytosol	51.55	46.89
CDY03713	Canola	cytosol	44.72	46.75
CDY68859	Canola	cytosol	40.99	45.52
CDY09492	Canola	cytosol	59.63	41.92
CDY03718	Canola	cytosol	59.01	41.48
CDY16542	Canola	cytosol	34.16	40.74
CDX92456	Canola	cytosol	32.92	39.26
KRH37979	Soybean	cytosol	36.02	37.42
VIT_01s0011g05190.t01	Wine grape	cytosol	34.78	37.09
KRH13947	Soybean	cytosol	35.4	36.77
VIT_01s0011g05150.t01	Wine grape	cytosol	31.06	36.23
VIT_01s0011g05170.t01	Wine grape	cytosol	14.29	35.94
Solyc04g007830.2.1	Tomato	cytosol	29.81	35.82
KRH13946	Soybean	cytosol	32.92	34.19
PGSC0003DMT400073916	Potato	cytosol	25.47	34.17
PGSC0003DMT400022721	Potato	cytosol	32.3	33.99
PGSC0003DMT400031542	Potato	cytosol	32.3	33.99
PGSC0003DMT400073915	Potato	cytosol	32.3	33.99
Solyc05g046140.2.1	Tomato	endoplasmic reticulum, extracellular	31.06	33.33
PGSC0003DMT400031386	Potato	cytosol	31.06	33.11
VIT_01s0011g05180.t01	Wine grape	cytosol	31.06	33.11
Solyc05g046160.1.1	Tomato	cytosol	13.04	32.81
PGSC0003DMT400075925	Potato	cytosol	23.6	32.76
Solyc07g008710.2.1	Tomato	cytosol, extracellular, nucleus	32.3	32.7
Solyc09g014530.2.1	Tomato	cytosol, extracellular	30.43	32.67
Solyc09g014580.2.1	Tomato	cytosol	30.43	32.24
PGSC0003DMT400021866	Potato	cytosol	30.43	32.24
Solyc01g081130.2.1	Tomato	cytosol	14.91	31.58
PGSC0003DMT400021868	Potato	cytosol	29.19	31.33
CDX96282	Canola	cytosol	23.6	31.15
Solyc09g014550.2.1	Tomato	cytosol	27.95	29.61
PGSC0003DMT400025429	Potato	cytosol	27.33	29.33
KRH13944	Soybean	cytosol	25.47	29.29
PGSC0003DMT400025420	Potato	cytosol	27.33	29.14
PGSC0003DMT400022679	Potato	cytosol	27.33	29.14
PGSC0003DMT400021867	Potato	cytosol	27.33	28.95
PGSC0003DMT400025419	Potato	cytosol	23.6	28.79
Solyc05g046150.2.1	Tomato	cytosol, extracellular	26.71	28.67
PGSC0003DMT400041455	Potato	cytosol	26.71	28.48
Solyc09g014560.1.1	Tomato	cytosol	13.04	28.38
Solyc05g046220.1.1	Tomato	cytosol	16.77	28.12
PGSC0003DMT400041449	Potato	cytosol	19.88	28.07
PGSC0003DMT400041446	Potato	cytosol	26.09	28.0
Solyc09g005400.2.1	Tomato	cytosol	26.09	28.0
Solyc09g005420.2.1	Tomato	cytosol	26.09	28.0
PGSC0003DMT400056811	Potato	cytosol	22.36	27.91
PGSC0003DMT400077743	Potato	cytosol	26.09	27.81
Solyc09g005500.2.1	Tomato	extracellular	26.09	27.81
Solyc09g014540.1.1	Tomato	cytosol	17.39	27.72
PGSC0003DMT400004549	Potato	cytosol	26.09	27.63
Solyc09g005410.1.1	Tomato	cytosol	22.98	27.21
CDY11541	Canola	cytosol	23.6	24.52
PGSC0003DMT400059724	Potato	cytosol	32.3	24.07
CDY09498	Canola	cytosol	21.74	23.97
PGSC0003DMT400091938	Potato	cytosol	22.36	23.23
CDY03712	Canola	cytosol	20.5	22.6
CDY41464	Canola	cytosol	20.5	22.45
CDX91697	Canola	cytosol	19.88	21.62
CDY41462	Canola	cytosol	19.25	21.23
PGSC0003DMT400044158	Potato	cytosol	16.77	18.75
PGSC0003DMT400020053	Potato	cytosol	31.68	17.23
PGSC0003DMT400075928	Potato	cytosol	31.06	16.84

Protein Annotations

EnsemblPlants:CDY41463	EnsemblPlantsGene:GSBRNA2T00073065001	Gene3D:3.30.530.20	GO:A0A078HXI4	GO:GO:0006950	GO:GO:0006952
GO:GO:0008150	GO:GO:0009607	InterPro:Bet_v_I/MLP	InterPro:IPR023393	InterPro:START-like_dom_sf	PANTHER:PTHR31907
PANTHER:PTHR31907:SF4	PFAM:PF00407	ProteinID:CDY41463	ProteinID:CDY41463.1	SMART:SM01037	SUPFAM:SSF55961
UniParc:UPI00025465BA	UniProt:A0A078HXI4	MapMan:35.1	:	:	:

Description

BnaA08g20650DBnaA08g20650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXI4]

Coordinates

chrLK032498:-:124056..124887

Molecular Weight (calculated)

18080.1 Da

IEP (calculated)

5.373

GRAVY (calculated)

-0.312

Length

161 amino acids

Sequence
(BLAST)

001: MAQAMLKPSL QGEIEADVEI KAPATKFYHM FAARPQDLSK ASLENLQGCR VLEGEMGKVG TLVTWNYVQD GKPMVANERI EAVEPKKNMI KFRVLEGDLM
101: KEFKSFLCTI QVTPKQGGPG GVVNWRMEYE RIDENVAPPE TLLQVCIKTS KEIDEMLMSK A

Best Arabidopsis Sequence Match ( AT1G70830.2 )
(BLAST)

001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEEEEVKTPE TPSLVGKLET DVEIKASAEK
201: FHHMFAGKPH HVSKASPGNI QGCDLHEGDW GQVGSIVFWN YVHGKGKGG

Arabidopsis Description

MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.