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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc04g078310.2.1
Solyc12g088470.1.1
Solyc12g088500.1.1
Solyc12g088520.1.1
Solyc12g088530.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70830.1 Solyc04g078310.2.1 AT5G43080.1 20706207
AT1G70830.1 Solyc12g088470.1.1 AT5G43080.1 20706207
AT1G70830.1 Solyc12g088500.1.1 AT5G43080.1 20706207
AT1G70830.1 Solyc12g088520.1.1 AT5G43080.1 20706207
AT1G70830.1 Solyc12g088530.1.1 AT5G43080.1 20706207
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400025429 Potato cytosol 92.0 92.0
Solyc09g005410.1.1 Tomato cytosol 78.0 86.03
Solyc09g005420.2.1 Tomato cytosol 83.33 83.33
Solyc09g014530.2.1 Tomato cytosol, extracellular 78.67 78.67
Solyc09g014550.2.1 Tomato cytosol 79.33 78.29
Solyc01g081130.2.1 Tomato cytosol 38.67 76.32
Solyc09g014580.2.1 Tomato cytosol 74.67 73.68
Solyc09g014560.1.1 Tomato cytosol 34.67 70.27
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 61.33 57.86
Solyc09g014540.1.1 Tomato cytosol 36.67 54.46
Solyc09g005500.2.1 Tomato extracellular 44.67 44.37
VIT_01s0011g05170.t01 Wine grape cytosol 18.67 43.75
Solyc05g046160.1.1 Tomato cytosol 18.67 43.75
VIT_01s0011g05190.t01 Wine grape cytosol 44.0 43.71
VIT_01s0011g05150.t01 Wine grape cytosol 39.33 42.75
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 42.0 42.0
Solyc04g007830.2.1 Tomato cytosol 37.33 41.79
VIT_01s0011g05180.t01 Wine grape cytosol 40.67 40.4
Solyc05g046220.1.1 Tomato cytosol 25.33 39.58
AT1G70860.2 Thale cress cytosol 18.67 37.33
Solyc05g046150.2.1 Tomato cytosol, extracellular 37.33 37.33
KRH37979 Soybean cytosol 36.67 35.48
CDY09495 Canola cytosol 37.33 35.44
AT1G70890.1 Thale cress cytosol 36.67 34.81
KRH13947 Soybean cytosol 34.67 33.55
Bra007946.1-P Field mustard cytosol 30.0 32.85
AT1G70840.1 Thale cress cytosol 37.33 32.75
CDY03715 Canola cytosol 35.33 32.32
CDY65619 Canola cytosol 35.33 32.32
AT1G70880.1 Thale cress cytosol 34.0 32.08
AT5G28010.2 Thale cress cytosol 35.33 31.93
Bra003939.1-P Field mustard cytosol 34.67 31.9
Bra007947.1-P Field mustard cytosol 33.33 31.65
AT1G35260.1 Thale cress cytosol 32.0 31.58
Bra016180.1-P Field mustard cytosol 28.67 31.16
CDX89696 Canola cytosol 31.33 31.13
CDX68328 Canola cytosol 34.0 31.1
CDY23474 Canola cytosol 33.33 30.67
CDY41465 Canola cytosol 32.0 30.57
Bra016364.1-P Field mustard cytosol 32.0 30.57
CDY03713 Canola cytosol 31.33 30.52
AT1G35310.1 Thale cress cytosol 30.67 30.46
CDX72752 Canola cytosol 28.0 30.43
KRH13946 Soybean cytosol 31.33 30.32
AT1G23130.1 Thale cress cytosol 32.0 30.0
Bra012362.1-P Field mustard cytosol 32.0 30.0
CDY12484 Canola cytosol 32.0 30.0
KRH13944 Soybean cytosol 28.0 30.0
CDX91696 Canola cytosol 31.33 29.94
Bra012364.1-P Field mustard cytosol 31.33 29.56
CDY25772 Canola cytosol 31.33 29.56
Bra016182.1-P Field mustard cytosol 40.67 29.33
CDY09499 Canola cytosol 26.67 29.2
Bra016181.1-P Field mustard cytosol 26.67 28.99
CDX96283 Canola cytosol 26.67 28.99
AT5G28000.1 Thale cress cytosol 31.33 28.66
Bra016178.1-P Field mustard cytosol 30.0 28.48
CDY17433 Canola cytosol 28.67 28.48
CDY00801 Canola cytosol 33.33 28.25
CDY16542 Canola cytosol 25.33 28.15
CDY21418 Canola cytosol 34.0 28.02
Bra024564.1-P Field mustard cytosol 34.0 28.02
CDY12480 Canola cytosol 30.0 27.95
Bra016179.1-P Field mustard cytosol 27.33 27.89
CDX72753 Canola cytosol 29.33 27.85
CDX96282 Canola cytosol 22.0 27.05
Bra012361.1-P Field mustard cytosol 24.67 26.62
CDY12485 Canola cytosol 17.33 26.26
CDY41463 Canola cytosol 28.0 26.09
Bra016362.1-P Field mustard cytosol 28.0 26.09
CDY12482 Canola cytosol 21.33 25.6
CDX92456 Canola cytosol 22.67 25.19
CDY09492 Canola cytosol 38.0 24.89
CDY03718 Canola cytosol 38.0 24.89
Bra007945.1-P Field mustard cytosol 38.0 24.89
Bra002309.1-P Field mustard cytosol 22.0 24.44
CDY25771 Canola cytosol 24.67 23.27
Bra012363.1-P Field mustard cytosol 24.67 22.98
CDY70076 Canola cytosol 21.33 22.07
CDY68859 Canola cytosol 20.67 21.38
CDY11541 Canola cytosol 20.67 20.0
Bra007949.1-P Field mustard cytosol 33.33 19.84
AT1G70850.1 Thale cress cytosol 38.0 18.04
AT1G70830.1 Thale cress cytosol 36.67 16.42
Protein Annotations
EnsemblPlants:Solyc09g005400.2.1EnsemblPlantsGene:Solyc09g005400.2Gene3D:3.30.530.20GO:GO:0006950GO:GO:0006952GO:GO:0008150
GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907PANTHER:PTHR31907:SF4
PFAM:PF00407SMART:SM01037SUPFAM:SSF55961UniParc:UPI000276B112UniProt:K4CQ30MapMan:35.1
Description
No Description!
Coordinates
chr9:-:296718..297754
Molecular Weight (calculated)
17075.6 Da
IEP (calculated)
5.024
GRAVY (calculated)
-0.187
Length
150 amino acids
Sequence
(BLAST)
001: MGLKSVLCAK IEMKANKDVF HDVFTNKPHH VSTMSPLHIQ NFELLEGGIG IVGSKICWNY TLDGEKKISK QILETIDYEN KVLTLKEFEG DVTDIYDSFK
101: AILHIETKGE IDLVCWTLEY ERPNENVPEL INVLNFVVGM TKAIDDHHAN
Best Arabidopsis Sequence Match ( AT1G70830.5 )
(BLAST)
001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEE
Arabidopsis Description
MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.