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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY41465 Canola cytosol 99.36 99.36
AT5G28010.2 Thale cress cytosol 80.25 75.9
Bra012362.1-P Field mustard cytosol 74.52 73.12
Bra007946.1-P Field mustard cytosol 59.87 68.61
Bra012361.1-P Field mustard cytosol 60.51 68.35
AT5G28000.1 Thale cress cytosol 66.88 64.02
Bra003939.1-P Field mustard cytosol 66.24 63.8
Bra007947.1-P Field mustard cytosol 63.69 63.29
Bra016362.1-P Field mustard cytosol 57.96 56.52
Bra016180.1-P Field mustard cytosol 49.68 56.52
Bra024564.1-P Field mustard cytosol 63.69 54.95
Bra016178.1-P Field mustard cytosol 54.78 54.43
Bra016181.1-P Field mustard cytosol 47.77 54.35
Bra012364.1-P Field mustard cytosol 54.78 54.09
Bra016179.1-P Field mustard cytosol 49.04 52.38
Bra016182.1-P Field mustard cytosol 67.52 50.96
Bra012363.1-P Field mustard cytosol 50.96 49.69
Bra007945.1-P Field mustard cytosol 67.52 46.29
VIT_01s0011g05170.t01 Wine grape cytosol 18.47 45.31
VIT_01s0011g05190.t01 Wine grape cytosol 42.68 44.37
Solyc05g046160.1.1 Tomato cytosol 17.2 42.19
VIT_01s0011g05150.t01 Wine grape cytosol 36.94 42.03
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 40.13 42.0
Bra002309.1-P Field mustard cytosol 35.03 40.74
KRH13947 Soybean cytosol 40.13 40.65
PGSC0003DMT400075925 Potato cytosol 29.94 40.52
Solyc04g007830.2.1 Tomato cytosol 34.39 40.3
PGSC0003DMT400077743 Potato cytosol 38.22 39.74
PGSC0003DMT400022679 Potato cytosol 38.22 39.74
PGSC0003DMT400056811 Potato cytosol 32.48 39.53
Solyc09g005500.2.1 Tomato extracellular 37.58 39.07
PGSC0003DMT400041455 Potato cytosol 37.58 39.07
KRH37979 Soybean cytosol 38.22 38.71
PGSC0003DMT400031386 Potato cytosol 36.94 38.41
VIT_01s0011g05180.t01 Wine grape cytosol 36.31 37.75
Solyc05g046150.2.1 Tomato cytosol, extracellular 35.67 37.33
Bra007949.1-P Field mustard cytosol 59.87 37.3
PGSC0003DMT400073916 Potato cytosol 28.03 36.67
Solyc05g046220.1.1 Tomato cytosol 22.29 36.46
KRH13946 Soybean cytosol 35.67 36.13
PGSC0003DMT400031542 Potato cytosol 35.03 35.95
Solyc01g081130.2.1 Tomato cytosol 17.2 35.53
PGSC0003DMT400073915 Potato cytosol 34.39 35.29
PGSC0003DMT400022721 Potato cytosol 34.39 35.29
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 35.67 35.22
Solyc09g014530.2.1 Tomato cytosol, extracellular 33.12 34.67
PGSC0003DMT400021866 Potato cytosol 33.12 34.21
Solyc09g014580.2.1 Tomato cytosol 32.48 33.55
PGSC0003DMT400041449 Potato cytosol 24.2 33.33
PGSC0003DMT400025429 Potato cytosol 31.85 33.33
PGSC0003DMT400021868 Potato cytosol 31.85 33.33
Solyc09g014550.2.1 Tomato cytosol 31.85 32.89
PGSC0003DMT400021867 Potato cytosol 31.85 32.89
Bra016363.1-P Field mustard cytosol 30.57 32.65
Bra016361.1-P Field mustard cytosol 27.39 32.58
PGSC0003DMT400025419 Potato cytosol 27.39 32.58
Solyc09g005400.2.1 Tomato cytosol 30.57 32.0
Solyc09g005420.2.1 Tomato cytosol 30.57 32.0
Solyc09g005410.1.1 Tomato cytosol 27.39 31.62
PGSC0003DMT400091938 Potato cytosol 31.21 31.61
Solyc09g014560.1.1 Tomato cytosol 14.65 31.08
PGSC0003DMT400004549 Potato cytosol 29.94 30.92
KRH13944 Soybean cytosol 27.39 30.71
PGSC0003DMT400025420 Potato cytosol 29.3 30.46
PGSC0003DMT400059724 Potato cytosol 41.4 30.09
Solyc09g014540.1.1 Tomato cytosol 19.11 29.7
PGSC0003DMT400041446 Potato cytosol 28.03 29.33
Bra007950.1-P Field mustard cytosol 26.11 28.08
PGSC0003DMT400044158 Potato cytosol 23.57 25.69
PGSC0003DMT400020053 Potato cytosol 40.13 21.28
PGSC0003DMT400075928 Potato cytosol 39.49 20.88
Protein Annotations
EnsemblPlants:Bra016364.1EnsemblPlants:Bra016364.1-PEnsemblPlantsGene:Bra016364Gene3D:3.30.530.20GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PANTHER:PTHR31907:SF4PFAM:PF00407SMART:SM01037SUPFAM:SSF55961UniParc:UPI00025465BCUniProt:M4DIN7
MapMan:35.1:::::
Description
AT5G28010 (E=2e-074) | Bet v I allergen family protein
Coordinates
chrA08:-:18053897..18054640
Molecular Weight (calculated)
17918.3 Da
IEP (calculated)
5.092
GRAVY (calculated)
-0.318
Length
157 amino acids
Sequence
(BLAST)
001: MAQSSLFGEL EVEVEIKSSA AKFYHMYAGT PHHVANATPR NVQACDLHDG EWGEVGSIIF WNYVHDGQAK VAKERIEVVK PEKKLVKFRV LEGDLMEEFK
101: SFLITIKVTP KQGGSGSIVK WHFEYEKIDE NISHPETLLP FFADMIKEID EHLLSEE
Best Arabidopsis Sequence Match ( AT5G28010.2 )
(BLAST)
001: MAEKVEVTTM PKSSLLGKLE VEVEIKAPAA IFYHIYAGRP HHVAKATPRN VQSCDLHDGE WGTVGSIVYW NYVHEGQAKV AKERIELVEP EKKLIKFRVI
101: EGDVMAEYKS FLITIQVTPK EGGTGSVVKW HIEYEKIDEN VPHPENLLPF FAEMTKEIDE HLLSEE
Arabidopsis Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K5S5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.