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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92456 Canola cytosol 94.81 94.81
AT1G70860.2 Thale cress cytosol 31.85 57.33
Bra016180.1-P Field mustard cytosol 45.93 44.93
Bra016181.1-P Field mustard cytosol 45.19 44.2
Bra003939.1-P Field mustard cytosol 45.19 37.42
Bra007946.1-P Field mustard cytosol 37.04 36.5
Bra016364.1-P Field mustard cytosol 40.74 35.03
Bra016178.1-P Field mustard cytosol 40.74 34.81
Bra007947.1-P Field mustard cytosol 40.0 34.18
Bra016362.1-P Field mustard cytosol 39.26 32.92
VIT_01s0011g05170.t01 Wine grape cytosol 15.56 32.81
Bra016179.1-P Field mustard cytosol 34.07 31.29
Solyc09g014560.1.1 Tomato cytosol 17.04 31.08
Bra012362.1-P Field mustard cytosol 36.3 30.62
Bra012364.1-P Field mustard cytosol 35.56 30.19
Bra024564.1-P Field mustard cytosol 40.0 29.67
KRH37979 Soybean cytosol 32.59 28.39
Bra016182.1-P Field mustard cytosol 43.7 28.37
VIT_01s0011g05150.t01 Wine grape cytosol 28.89 28.26
PGSC0003DMT400073915 Potato cytosol 31.11 27.45
PGSC0003DMT400022721 Potato cytosol 31.11 27.45
Bra012363.1-P Field mustard cytosol 32.59 27.33
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 31.85 27.04
PGSC0003DMT400073916 Potato cytosol 23.7 26.67
Bra007945.1-P Field mustard cytosol 45.19 26.64
VIT_01s0011g05190.t01 Wine grape cytosol 29.63 26.49
Solyc01g081130.2.1 Tomato cytosol 14.81 26.32
PGSC0003DMT400031542 Potato cytosol 29.63 26.14
KRH13947 Soybean cytosol 29.63 25.81
PGSC0003DMT400056811 Potato cytosol 24.44 25.58
Solyc09g014530.2.1 Tomato cytosol, extracellular 28.15 25.33
Bra012361.1-P Field mustard cytosol 25.93 25.18
PGSC0003DMT400077743 Potato cytosol 28.15 25.17
PGSC0003DMT400022679 Potato cytosol 28.15 25.17
PGSC0003DMT400041455 Potato cytosol 28.15 25.17
Solyc09g005410.1.1 Tomato cytosol 25.19 25.0
Solyc09g014580.2.1 Tomato cytosol 28.15 25.0
Solyc09g005420.2.1 Tomato cytosol 27.41 24.67
PGSC0003DMT400021868 Potato cytosol 27.41 24.67
Solyc09g014550.2.1 Tomato cytosol 27.41 24.34
PGSC0003DMT400021867 Potato cytosol 27.41 24.34
PGSC0003DMT400021866 Potato cytosol 27.41 24.34
PGSC0003DMT400025419 Potato cytosol 23.7 24.24
PGSC0003DMT400025429 Potato cytosol 26.67 24.0
KRH13946 Soybean cytosol 27.41 23.87
VIT_01s0011g05180.t01 Wine grape cytosol 26.67 23.84
PGSC0003DMT400025420 Potato cytosol 25.93 23.18
Solyc09g005500.2.1 Tomato extracellular 25.93 23.18
PGSC0003DMT400041446 Potato cytosol 25.19 22.67
PGSC0003DMT400031386 Potato cytosol 25.19 22.52
PGSC0003DMT400004549 Potato cytosol 25.19 22.37
Solyc09g005400.2.1 Tomato cytosol 24.44 22.0
PGSC0003DMT400041449 Potato cytosol 17.78 21.05
PGSC0003DMT400075925 Potato cytosol 17.78 20.69
Bra007949.1-P Field mustard cytosol 38.52 20.63
Solyc05g046160.1.1 Tomato cytosol 9.63 20.31
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 22.22 20.0
KRH13944 Soybean cytosol 20.74 20.0
Solyc05g046150.2.1 Tomato cytosol, extracellular 20.74 18.67
PGSC0003DMT400091938 Potato cytosol 20.74 18.06
Solyc04g007830.2.1 Tomato cytosol 17.78 17.91
Bra016361.1-P Field mustard cytosol 17.04 17.42
Bra007950.1-P Field mustard cytosol 17.78 16.44
PGSC0003DMT400059724 Potato cytosol 25.19 15.74
PGSC0003DMT400044158 Potato cytosol 16.3 15.28
Bra016363.1-P Field mustard cytosol 16.3 14.97
Solyc05g046220.1.1 Tomato cytosol 10.37 14.58
Solyc09g014540.1.1 Tomato cytosol 9.63 12.87
PGSC0003DMT400020053 Potato cytosol 24.44 11.15
PGSC0003DMT400075928 Potato cytosol 24.44 11.11
Protein Annotations
EnsemblPlants:Bra002309.1EnsemblPlants:Bra002309.1-PEnsemblPlantsGene:Bra002309Gene3D:3.30.530.20GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PANTHER:PTHR31907:SF4PFAM:PF00407SEG:segSMART:SM01037SUPFAM:SSF55961UniParc:UPI0002544C13
UniProt:M4CDM8MapMan:35.1::::
Description
AT1G70860 (E=2e-016) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: Bet v I allergen family protein (TAIR:AT1G70880.1).
Coordinates
chrA10:+:10376910..10377517
Molecular Weight (calculated)
15213.9 Da
IEP (calculated)
4.976
GRAVY (calculated)
-0.446
Length
135 amino acids
Sequence
(BLAST)
001: MARILETTVE LKSSPGKFLD MFVGKQQFEI SSVCPSYVQG CELREGEMGQ VGSIVVWRYV HGKWGGKNDD GDDRLNRSGE QPDHVQVTSK EGDVGSVAHW
101: HFQYVKLNEK VADPESLLQF AIEVSKEIDA HLFSW
Best Arabidopsis Sequence Match ( AT1G70880.1 )
(BLAST)
001: MAEEASSLVG IVETTVELKS SVEKFHDLLV GRPHHMSNAT PSNIQSAELQ EGEMGQVGAV ILWNYVHDGE AKSAKQRIES LDPEKNRITY RVVEGDLLKE
101: YTSFVTTFQV TPKEGEPGSV AHWHFEYEKI NEEVAHPETL LQLATEVSKD MDEHLLSEE
Arabidopsis Description
Major latex-like protein [Source:UniProtKB/TrEMBL;Acc:Q941R7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.