Factsheet for PGSC0003DMT400075928

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400030176
PGSC0003DMT400030222
PGSC0003DMT400055428

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G70830.1	PGSC0003DMT400030176	AT5G43080.1	20706207
AT1G70830.1	PGSC0003DMT400030222	AT5G43080.1	20706207
AT1G70830.1	PGSC0003DMT400055428	AT5G43080.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g046160.1.1	Tomato	cytosol	17.85	82.81
Solyc05g046220.1.1	Tomato	cytosol	25.25	78.12
PGSC0003DMT400059724	Potato	cytosol	56.57	77.78
PGSC0003DMT400020053	Potato	cytosol	75.08	75.34
PGSC0003DMT400031386	Potato	cytosol	38.05	74.83
PGSC0003DMT400075925	Potato	cytosol	25.93	66.38
VIT_01s0011g05170.t01	Wine grape	cytosol	11.11	51.56
VIT_01s0011g05150.t01	Wine grape	cytosol	22.22	47.83
VIT_01s0011g05190.t01	Wine grape	cytosol	23.91	47.02
PGSC0003DMT400022679	Potato	cytosol	23.91	47.02
PGSC0003DMT400041455	Potato	cytosol	23.91	47.02
PGSC0003DMT400077743	Potato	cytosol	23.57	46.36
PGSC0003DMT400031542	Potato	cytosol	23.57	45.75
VIT_01s0011g05180.t01	Wine grape	cytosol	23.23	45.7
PGSC0003DMT400056811	Potato	cytosol	19.53	44.96
KRH13947	Soybean	cytosol	23.23	44.52
PGSC0003DMT400073915	Potato	cytosol	22.9	44.44
PGSC0003DMT400022721	Potato	cytosol	22.56	43.79
PGSC0003DMT400025429	Potato	cytosol	21.89	43.33
CDY12485	Canola	cytosol	14.14	42.42
PGSC0003DMT400021866	Potato	cytosol	21.55	42.11
PGSC0003DMT400041449	Potato	cytosol	16.16	42.11
PGSC0003DMT400025420	Potato	cytosol	21.21	41.72
PGSC0003DMT400025419	Potato	cytosol	18.52	41.67
PGSC0003DMT400021868	Potato	cytosol	20.88	41.33
PGSC0003DMT400091938	Potato	cytosol	21.21	40.65
PGSC0003DMT400073916	Potato	cytosol	16.16	40.0
AT5G28010.2	Thale cress	cytosol	22.22	39.76
Bra016364.1-P	Field mustard	cytosol	20.88	39.49
CDY41465	Canola	cytosol	20.88	39.49
PGSC0003DMT400004549	Potato	cytosol	20.2	39.47
PGSC0003DMT400041446	Potato	cytosol	19.87	39.33
AT1G70890.1	Thale cress	cytosol	20.88	39.24
Bra007947.1-P	Field mustard	cytosol	20.88	39.24
CDX91696	Canola	cytosol	20.54	38.85
PGSC0003DMT400021867	Potato	cytosol	19.87	38.82
AT1G70860.2	Thale cress	cytosol	9.76	38.67
CDY09495	Canola	cytosol	20.54	38.61
AT1G70840.1	Thale cress	cytosol	22.22	38.6
Bra007946.1-P	Field mustard	cytosol	17.51	37.96
CDY65619	Canola	cytosol	20.88	37.8
CDY03715	Canola	cytosol	20.88	37.8
AT5G28000.1	Thale cress	cytosol	20.88	37.8
Bra003939.1-P	Field mustard	cytosol	20.54	37.42
CDY23474	Canola	cytosol	20.54	37.42
CDX68328	Canola	cytosol	20.54	37.2
Bra012362.1-P	Field mustard	cytosol	19.87	36.88
Bra012361.1-P	Field mustard	cytosol	17.17	36.69
CDY12484	Canola	cytosol	19.19	35.62
KRH13946	Soybean	cytosol	18.52	35.48
Bra016178.1-P	Field mustard	cytosol	18.86	35.44
AT1G70880.1	Thale cress	cytosol	18.86	35.22
KRH37979	Soybean	cytosol	18.18	34.84
CDY03713	Canola	cytosol	17.85	34.42
CDY09499	Canola	cytosol	15.82	34.31
CDX72753	Canola	cytosol	18.18	34.18
Bra016179.1-P	Field mustard	cytosol	16.84	34.01
CDY12482	Canola	cytosol	14.14	33.6
AT1G23130.1	Thale cress	cytosol	17.17	31.88
CDY21418	Canola	cytosol	19.53	31.87
Bra024564.1-P	Field mustard	cytosol	19.53	31.87
CDY12480	Canola	cytosol	17.17	31.68
AT1G35260.1	Thale cress	cytosol	16.16	31.58
Bra012364.1-P	Field mustard	cytosol	16.84	31.45
CDY25772	Canola	cytosol	16.84	31.45
CDY41463	Canola	cytosol	16.84	31.06
Bra016362.1-P	Field mustard	cytosol	16.84	31.06
PGSC0003DMT400044158	Potato	cytosol	14.81	30.56
CDY00801	Canola	cytosol	18.18	30.51
Bra016180.1-P	Field mustard	cytosol	14.14	30.43
CDY70076	Canola	cytosol	14.81	30.34
Bra016182.1-P	Field mustard	cytosol	20.88	29.81
AT1G35310.1	Thale cress	cytosol	15.15	29.8
CDX72752	Canola	cytosol	13.8	29.71
KRH13944	Soybean	cytosol	13.8	29.29
CDX96283	Canola	cytosol	13.47	28.99
Bra016181.1-P	Field mustard	cytosol	13.47	28.99
CDY68859	Canola	cytosol	14.14	28.97
CDX89696	Canola	cytosol	14.48	28.48
CDY25771	Canola	cytosol	15.15	28.3
Bra012363.1-P	Field mustard	cytosol	15.15	27.95
CDY17433	Canola	cytosol	13.8	27.15
Bra007945.1-P	Field mustard	cytosol	20.54	26.64
CDY09492	Canola	cytosol	20.54	26.64
CDY03718	Canola	cytosol	20.54	26.64
CDX92456	Canola	cytosol	11.11	24.44
Bra002309.1-P	Field mustard	cytosol	11.11	24.44
CDY16542	Canola	cytosol	10.77	23.7
Bra007949.1-P	Field mustard	cytosol	18.52	21.83
CDX96282	Canola	cytosol	8.75	21.31
CDY11541	Canola	cytosol	10.44	20.0
AT1G70850.1	Thale cress	cytosol	20.88	19.62
AT1G70830.1	Thale cress	cytosol	19.87	17.61

Protein Annotations

EnsemblPlants:PGSC0003DMT400075928	EnsemblPlantsGene:PGSC0003DMG400029524	Gene3D:3.30.530.20	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0009607	InterPro:Bet_v_I/MLP	InterPro:IPR023393	InterPro:START-like_dom_sf	PANTHER:PTHR31907	PANTHER:PTHR31907:SF4
PFAM:PF00407	PGSC:PGSC0003DMG400029524	SEG:seg	SMART:SM01037	SUPFAM:SSF55961	UniParc:UPI000294EA85
UniProt:M1CVY8	MapMan:35.1	:	:	:	:

Description

MLP 34 [Source:PGSC_GENE;Acc:PGSC0003DMG400029524]

Coordinates

chr4:+:2454118..2456957

Molecular Weight (calculated)

34396.9 Da

IEP (calculated)

5.389

GRAVY (calculated)

-0.434

Length

297 amino acids

Sequence
(BLAST)

001: MSLKGKLVSE INIKCDGDVF HEIFRHRPHH ISSMCDKLQS VDIHEGEWGT VGSVISWNFI HDGKEKVAKD IVEFIDEEKK FVKFKVIGGD LLDEYKSISF
101: SVHVESKSDQ NNLVTWISEY EKKNTIVPDP HTCVNFLLNM SKDIESHHLK GMLVSEIEIK SEVDILHEIF RYRPHHISSM CPDKIQNVDI HEGEWGTVGS
201: VISWNFTHDG KEKVVKEIVE EIDEETKLIK KKIIEGDLLE DYKSFCITAH VDTKDENNLV TWILEYEKKN ANVSDPHTFM ELCLNMTKDI ETYHIKS

Best Arabidopsis Sequence Match ( AT1G70850.1 )
(BLAST)

001: MAKTEAPSLV GKLETEVEIK ASAGQFHHMF AGKPHHVSKA SPGNIQSCDL HEGDWGTVGS IVFWNYVHDG EAKVAKERIE AVEPEKNLIT FRVIEGDLMK
101: EYKSFLITIQ VTPKHGGPGS IVHWHLEYEK ISDEVAHPET LLQFCVEVSQ EIDEHLLSEE EEVKTTETLE TEVEIKASAE KFHHMFAGKP HHVSKATPGN
201: IQSCDLHEGD WGTVGSIVFW NYVHDGEAKV AKERIEAVDP EKNLITFRVI EGDLMKEYKS FVITIQVTPK HGGSGSVVHW HFEYEKINEE VAHPETLLQF
301: AVEVSKEIDE HLLAEE

Arabidopsis Description

MLP34MLP-like protein 34 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.