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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92456 Canola cytosol 94.07 94.07
AT1G70860.2 Thale cress cytosol 29.63 53.33
CDX72752 Canola cytosol 47.41 46.38
CDX96283 Canola cytosol 46.67 45.65
CDY03715 Canola cytosol 52.59 43.29
CDY09495 Canola cytosol 50.37 43.04
CDY65619 Canola cytosol 51.85 42.68
CDY23474 Canola cytosol 49.63 41.1
CDX68328 Canola cytosol 49.63 40.85
CDY41465 Canola cytosol 42.96 36.94
CDX72753 Canola cytosol 42.96 36.71
CDX91696 Canola cytosol 42.22 36.31
CDX89696 Canola cytosol 40.0 35.76
CDY17433 Canola cytosol 39.26 35.1
CDY12480 Canola cytosol 41.48 34.78
CDY41463 Canola cytosol 40.74 34.16
CDY12484 Canola cytosol 40.0 33.75
CDY12485 Canola cytosol 24.44 33.33
CDY21418 Canola cytosol 44.44 32.97
CDY25772 Canola cytosol 38.52 32.7
CDY09499 Canola cytosol 32.59 32.12
KRH37979 Soybean cytosol 36.3 31.61
CDY12482 Canola cytosol 28.89 31.2
Solyc09g014560.1.1 Tomato cytosol 17.04 31.08
CDY00801 Canola cytosol 40.74 31.07
CDY25771 Canola cytosol 36.3 30.82
CDY03718 Canola cytosol 50.37 29.69
VIT_01s0011g05170.t01 Wine grape cytosol 14.07 29.69
PGSC0003DMT400022721 Potato cytosol 33.33 29.41
PGSC0003DMT400073915 Potato cytosol 33.33 29.41
CDY09492 Canola cytosol 49.63 29.26
VIT_01s0011g05150.t01 Wine grape cytosol 29.63 28.99
Solyc01g081130.2.1 Tomato cytosol 16.3 28.95
CDY68859 Canola cytosol 30.37 28.28
PGSC0003DMT400031542 Potato cytosol 31.85 28.1
CDY70076 Canola cytosol 29.63 27.59
CDY03713 Canola cytosol 31.11 27.27
KRH13947 Soybean cytosol 31.11 27.1
CDX96282 Canola cytosol 24.44 27.05
Solyc09g014550.2.1 Tomato cytosol 30.37 26.97
Solyc09g014580.2.1 Tomato cytosol 30.37 26.97
PGSC0003DMT400073916 Potato cytosol 23.7 26.67
VIT_01s0011g05190.t01 Wine grape cytosol 29.63 26.49
Solyc09g005410.1.1 Tomato cytosol 26.67 26.47
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 31.11 26.42
PGSC0003DMT400021867 Potato cytosol 29.63 26.32
PGSC0003DMT400025429 Potato cytosol 28.89 26.0
PGSC0003DMT400025420 Potato cytosol 28.89 25.83
KRH13946 Soybean cytosol 29.63 25.81
PGSC0003DMT400021866 Potato cytosol 28.89 25.66
PGSC0003DMT400056811 Potato cytosol 24.44 25.58
Solyc09g014530.2.1 Tomato cytosol, extracellular 28.15 25.33
Solyc09g005400.2.1 Tomato cytosol 28.15 25.33
Solyc09g005420.2.1 Tomato cytosol 28.15 25.33
PGSC0003DMT400021868 Potato cytosol 28.15 25.33
PGSC0003DMT400077743 Potato cytosol 28.15 25.17
PGSC0003DMT400022679 Potato cytosol 28.15 25.17
PGSC0003DMT400041455 Potato cytosol 28.15 25.17
PGSC0003DMT400025419 Potato cytosol 24.44 25.0
Solyc05g046160.1.1 Tomato cytosol 11.85 25.0
Solyc09g005500.2.1 Tomato extracellular 27.41 24.5
VIT_01s0011g05180.t01 Wine grape cytosol 27.41 24.5
KRH13944 Soybean cytosol 25.19 24.29
PGSC0003DMT400031386 Potato cytosol 26.67 23.84
PGSC0003DMT400004549 Potato cytosol 26.67 23.68
PGSC0003DMT400041446 Potato cytosol 25.93 23.33
PGSC0003DMT400075925 Potato cytosol 20.0 23.28
PGSC0003DMT400041449 Potato cytosol 18.52 21.93
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 23.7 21.33
CDY11541 Canola cytosol 23.7 20.65
PGSC0003DMT400091938 Potato cytosol 22.22 19.35
Solyc05g046150.2.1 Tomato cytosol, extracellular 21.48 19.33
CDY03712 Canola cytosol 20.74 19.18
CDY09498 Canola cytosol 20.0 18.49
Solyc04g007830.2.1 Tomato cytosol 17.78 17.91
Solyc05g046220.1.1 Tomato cytosol 12.59 17.71
CDY41462 Canola cytosol 17.04 15.75
PGSC0003DMT400059724 Potato cytosol 25.19 15.74
CDY41464 Canola cytosol 17.04 15.65
CDX91697 Canola cytosol 17.04 15.54
PGSC0003DMT400044158 Potato cytosol 16.3 15.28
Solyc09g014540.1.1 Tomato cytosol 10.37 13.86
PGSC0003DMT400020053 Potato cytosol 25.93 11.82
PGSC0003DMT400075928 Potato cytosol 23.7 10.77
Protein Annotations
EnsemblPlants:CDY16542EnsemblPlantsGene:GSBRNA2T00094324001Gene3D:3.30.530.20GO:A0A078FUR4GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PANTHER:PTHR31907:SF4PFAM:PF00407ProteinID:CDY16542ProteinID:CDY16542.1SMART:SM01037SUPFAM:SSF55961
UniParc:UPI0004EE23DAUniProt:A0A078FUR4MapMan:35.1:::
Description
BnaC09g37310DBnaC09g37310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUR4]
Coordinates
chrLK032065:-:49462..50169
Molecular Weight (calculated)
15074.7 Da
IEP (calculated)
4.957
GRAVY (calculated)
-0.394
Length
135 amino acids
Sequence
(BLAST)
001: MARILETTVE LKSSPGKFLD MFVGKQQFEV SSICPSYIQG CELREGEMGQ VGSIVVWRYV HGEWGGKNDN GDNRLNRSGE QPGDVQVTSK EGGVGSVAHW
101: HFQYVKINEK VADPESLLQF AVEVSKEIDA HLFSW
Best Arabidopsis Sequence Match ( AT1G70880.1 )
(BLAST)
001: MAEEASSLVG IVETTVELKS SVEKFHDLLV GRPHHMSNAT PSNIQSAELQ EGEMGQVGAV ILWNYVHDGE AKSAKQRIES LDPEKNRITY RVVEGDLLKE
101: YTSFVTTFQV TPKEGEPGSV AHWHFEYEKI NEEVAHPETL LQLATEVSKD MDEHLLSEE
Arabidopsis Description
Major latex-like protein [Source:UniProtKB/TrEMBL;Acc:Q941R7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.