Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDY22369 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G70830.1 | CDY22369 | AT5G43080.1 | 20706207 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11541 | Canola | cytosol | 84.43 | 66.45 |
| VIT_01s0011g05170.t01 | Wine grape | cytosol | 25.41 | 48.44 |
| Bra016182.1-P | Field mustard | cytosol | 68.85 | 40.38 |
| Solyc09g014560.1.1 | Tomato | cytosol | 21.31 | 35.14 |
| CDY65619 | Canola | cytosol | 45.08 | 33.54 |
| CDY03715 | Canola | cytosol | 45.08 | 33.54 |
| CDY09495 | Canola | cytosol | 41.8 | 32.28 |
| CDY23474 | Canola | cytosol | 42.62 | 31.9 |
| CDY00801 | Canola | cytosol | 45.9 | 31.64 |
| CDY03713 | Canola | cytosol | 39.34 | 31.17 |
| CDX68328 | Canola | cytosol | 41.8 | 31.1 |
| CDX91696 | Canola | cytosol | 37.7 | 29.3 |
| CDY41465 | Canola | cytosol | 36.89 | 28.66 |
| CDY12484 | Canola | cytosol | 36.89 | 28.12 |
| CDY03718 | Canola | cytosol | 52.46 | 27.95 |
| CDY09492 | Canola | cytosol | 52.46 | 27.95 |
| CDY21418 | Canola | cytosol | 40.16 | 26.92 |
| Solyc01g081130.2.1 | Tomato | cytosol | 16.39 | 26.32 |
| CDY09499 | Canola | cytosol | 29.51 | 26.28 |
| CDX72753 | Canola | cytosol | 33.61 | 25.95 |
| PGSC0003DMT400041449 | Potato | cytosol | 23.77 | 25.44 |
| CDY25772 | Canola | cytosol | 32.79 | 25.16 |
| CDY16542 | Canola | cytosol | 27.05 | 24.44 |
| CDY12480 | Canola | cytosol | 31.97 | 24.22 |
| CDY41463 | Canola | cytosol | 31.15 | 23.6 |
| KRH13944 | Soybean | cytosol | 27.05 | 23.57 |
| CDY12485 | Canola | cytosol | 18.85 | 23.23 |
| KRH37979 | Soybean | cytosol | 29.51 | 23.23 |
| VIT_01s0011g05190.t01 | Wine grape | cytosol | 28.69 | 23.18 |
| CDX89696 | Canola | cytosol | 28.69 | 23.18 |
| CDX92456 | Canola | cytosol | 24.59 | 22.22 |
| Solyc09g005400.2.1 | Tomato | cytosol | 27.05 | 22.0 |
| PGSC0003DMT400025420 | Potato | cytosol | 27.05 | 21.85 |
| CDY17433 | Canola | cytosol | 27.05 | 21.85 |
| PGSC0003DMT400025429 | Potato | cytosol | 26.23 | 21.33 |
| KRH13947 | Soybean | cytosol | 27.05 | 21.29 |
| VIT_01s0011g05180.t01 | Wine grape | cytosol | 26.23 | 21.19 |
| Solyc09g014580.2.1 | Tomato | cytosol | 26.23 | 21.05 |
| PGSC0003DMT400073915 | Potato | cytosol | 26.23 | 20.91 |
| PGSC0003DMT400022721 | Potato | cytosol | 26.23 | 20.91 |
| CDY25771 | Canola | cytosol | 27.05 | 20.75 |
| Solyc05g046140.2.1 | Tomato | endoplasmic reticulum, extracellular | 25.41 | 20.67 |
| PGSC0003DMT400041455 | Potato | cytosol | 25.41 | 20.53 |
| PGSC0003DMT400077743 | Potato | cytosol | 25.41 | 20.53 |
| PGSC0003DMT400021867 | Potato | cytosol | 25.41 | 20.39 |
| VIT_01s0011g05150.t01 | Wine grape | cytosol | 22.95 | 20.29 |
| CDX72752 | Canola | cytosol | 22.95 | 20.29 |
| PGSC0003DMT400031542 | Potato | cytosol | 25.41 | 20.26 |
| PGSC0003DMT400021868 | Potato | cytosol | 24.59 | 20.0 |
| PGSC0003DMT400022679 | Potato | cytosol | 24.59 | 19.87 |
| Solyc09g005410.1.1 | Tomato | cytosol | 22.13 | 19.85 |
| PGSC0003DMT400021866 | Potato | cytosol | 24.59 | 19.74 |
| Solyc09g014550.2.1 | Tomato | cytosol | 24.59 | 19.74 |
| KRH13946 | Soybean | cytosol | 24.59 | 19.35 |
| Solyc09g005420.2.1 | Tomato | cytosol | 23.77 | 19.33 |
| Solyc09g005500.2.1 | Tomato | extracellular | 23.77 | 19.21 |
| AT1G70830.1 | Thale cress | cytosol | 52.46 | 19.1 |
| CDX96283 | Canola | cytosol | 21.31 | 18.84 |
| Solyc09g014530.2.1 | Tomato | cytosol, extracellular | 22.95 | 18.67 |
| CDY70076 | Canola | cytosol | 22.13 | 18.62 |
| PGSC0003DMT400056811 | Potato | cytosol | 19.67 | 18.6 |
| Solyc07g008710.2.1 | Tomato | cytosol, extracellular, nucleus | 23.77 | 18.24 |
| PGSC0003DMT400041446 | Potato | cytosol | 22.13 | 18.0 |
| CDY68859 | Canola | cytosol | 21.31 | 17.93 |
| PGSC0003DMT400025419 | Potato | cytosol | 18.85 | 17.42 |
| PGSC0003DMT400004549 | Potato | cytosol | 21.31 | 17.11 |
| CDY12482 | Canola | cytosol | 17.21 | 16.8 |
| PGSC0003DMT400091938 | Potato | cytosol | 21.31 | 16.77 |
| Solyc05g046150.2.1 | Tomato | cytosol, extracellular | 20.49 | 16.67 |
| PGSC0003DMT400031386 | Potato | cytosol | 20.49 | 16.56 |
| CDY09498 | Canola | cytosol | 18.03 | 15.07 |
| CDY03712 | Canola | cytosol | 18.03 | 15.07 |
| Solyc04g007830.2.1 | Tomato | cytosol | 16.39 | 14.93 |
| PGSC0003DMT400059724 | Potato | cytosol | 23.77 | 13.43 |
| PGSC0003DMT400073916 | Potato | cytosol | 13.11 | 13.33 |
| PGSC0003DMT400075925 | Potato | cytosol | 11.48 | 12.07 |
| PGSC0003DMT400020053 | Potato | cytosol | 24.59 | 10.14 |
| CDY41464 | Canola | cytosol | 11.48 | 9.52 |
| CDY41462 | Canola | cytosol | 10.66 | 8.9 |
| CDX91697 | Canola | cytosol | 10.66 | 8.78 |
| PGSC0003DMT400075928 | Potato | cytosol | 21.31 | 8.75 |
| PGSC0003DMT400044158 | Potato | cytosol | 6.56 | 5.56 |
| Solyc09g014540.1.1 | Tomato | cytosol | 3.28 | 3.96 |
| Solyc05g046220.1.1 | Tomato | cytosol | 1.64 | 2.08 |
| Solyc05g046160.1.1 | Tomato | cytosol | 0.82 | 1.56 |
Protein Annotations
| EnsemblPlants:CDX96282 | EnsemblPlantsGene:GSBRNA2T00102421001 | Gene3D:3.30.530.20 | GO:A0A078E5A1 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31907 |
| PANTHER:PTHR31907:SF4 | PFAM:PF00407 | ProteinID:CDX96282 | ProteinID:CDX96282.1 | SEG:seg | SMART:SM01037 |
| SUPFAM:SSF55961 | UniParc:UPI0004EEAFAE | MapMan:35.1 | : | : | : |
Description
BnaA07g28930D
Coordinates
chrLK031894:-:89868..90728
Molecular Weight (calculated)
13519.9 Da
IEP (calculated)
6.795
GRAVY (calculated)
-0.784
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKVETPVT VAVACPPKKV EATNKQAEEE VKTTETSSLL GMVEAYVEIK ASAEKFHHMF TAKPHHVSKV SPGNIQNCEL HEGDWGKPGS IIFWNYFHGK
101: WRGKGGKGED RRGGSGEEPD RV
101: WRGKGGKGED RRGGSGEEPD RV
001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEEEEVKTPE TPSLVGKLET DVEIKASAEK
201: FHHMFAGKPH HVSKASPGNI QGCDLHEGDW GQVGSIVFWN YVHGKGKGG
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEEEEVKTPE TPSLVGKLET DVEIKASAEK
201: FHHMFAGKPH HVSKASPGNI QGCDLHEGDW GQVGSIVFWN YVHGKGKGG
Arabidopsis Description
MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.