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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016364.1-P Field mustard cytosol 99.36 99.36
CDX91696 Canola cytosol 92.36 92.36
CDY12485 Canola cytosol 54.14 85.86
AT5G28010.2 Thale cress cytosol 80.89 76.51
CDY12484 Canola cytosol 76.43 75.0
CDY03715 Canola cytosol 69.43 66.46
CDY65619 Canola cytosol 68.79 65.85
CDX68328 Canola cytosol 68.15 65.24
CDY09495 Canola cytosol 65.61 65.19
AT5G28000.1 Thale cress cytosol 67.52 64.63
CDY23474 Canola cytosol 66.88 64.42
CDY09499 Canola cytosol 51.59 59.12
CDY12480 Canola cytosol 59.87 58.39
CDY41463 Canola cytosol 58.6 57.14
CDX72752 Canola cytosol 49.04 55.8
CDY21418 Canola cytosol 63.69 54.95
CDX96283 Canola cytosol 47.77 54.35
CDY25772 Canola cytosol 54.78 54.09
CDX72753 Canola cytosol 54.14 53.8
CDY12482 Canola cytosol 42.68 53.6
CDX89696 Canola cytosol 49.68 51.66
CDY00801 Canola cytosol 57.32 50.85
CDY17433 Canola cytosol 48.41 50.33
CDY25771 Canola cytosol 50.96 50.31
CDY03713 Canola cytosol 49.04 50.0
CDY70076 Canola cytosol 43.95 47.59
CDY03718 Canola cytosol 68.15 46.72
CDY09492 Canola cytosol 66.88 45.85
VIT_01s0011g05170.t01 Wine grape cytosol 18.47 45.31
VIT_01s0011g05190.t01 Wine grape cytosol 42.68 44.37
CDY68859 Canola cytosol 40.76 44.14
CDY16542 Canola cytosol 36.94 42.96
Solyc05g046160.1.1 Tomato cytosol 17.2 42.19
VIT_01s0011g05150.t01 Wine grape cytosol 36.94 42.03
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 40.13 42.0
CDX92456 Canola cytosol 35.67 41.48
KRH13947 Soybean cytosol 40.13 40.65
PGSC0003DMT400075925 Potato cytosol 29.94 40.52
Solyc04g007830.2.1 Tomato cytosol 34.39 40.3
PGSC0003DMT400077743 Potato cytosol 38.22 39.74
PGSC0003DMT400022679 Potato cytosol 38.22 39.74
PGSC0003DMT400056811 Potato cytosol 32.48 39.53
Solyc09g005500.2.1 Tomato extracellular 37.58 39.07
PGSC0003DMT400041455 Potato cytosol 37.58 39.07
KRH37979 Soybean cytosol 38.22 38.71
PGSC0003DMT400031386 Potato cytosol 36.94 38.41
VIT_01s0011g05180.t01 Wine grape cytosol 36.31 37.75
Solyc05g046150.2.1 Tomato cytosol, extracellular 35.67 37.33
CDX96282 Canola cytosol 28.66 36.89
PGSC0003DMT400073916 Potato cytosol 28.03 36.67
Solyc05g046220.1.1 Tomato cytosol 22.29 36.46
KRH13946 Soybean cytosol 35.67 36.13
PGSC0003DMT400031542 Potato cytosol 35.03 35.95
Solyc01g081130.2.1 Tomato cytosol 17.2 35.53
PGSC0003DMT400022721 Potato cytosol 34.39 35.29
PGSC0003DMT400073915 Potato cytosol 34.39 35.29
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 35.67 35.22
Solyc09g014530.2.1 Tomato cytosol, extracellular 33.12 34.67
PGSC0003DMT400021866 Potato cytosol 33.12 34.21
Solyc09g014580.2.1 Tomato cytosol 32.48 33.55
PGSC0003DMT400041449 Potato cytosol 24.2 33.33
PGSC0003DMT400025429 Potato cytosol 31.85 33.33
PGSC0003DMT400021868 Potato cytosol 31.85 33.33
PGSC0003DMT400021867 Potato cytosol 31.85 32.89
Solyc09g014550.2.1 Tomato cytosol 31.85 32.89
CDY41464 Canola cytosol 30.57 32.65
PGSC0003DMT400025419 Potato cytosol 27.39 32.58
Solyc09g005420.2.1 Tomato cytosol 30.57 32.0
Solyc09g005400.2.1 Tomato cytosol 30.57 32.0
Solyc09g005410.1.1 Tomato cytosol 27.39 31.62
PGSC0003DMT400091938 Potato cytosol 31.21 31.61
CDY41462 Canola cytosol 29.3 31.51
Solyc09g014560.1.1 Tomato cytosol 14.65 31.08
CDX91697 Canola cytosol 29.3 31.08
PGSC0003DMT400004549 Potato cytosol 29.94 30.92
KRH13944 Soybean cytosol 27.39 30.71
PGSC0003DMT400025420 Potato cytosol 29.3 30.46
PGSC0003DMT400059724 Potato cytosol 41.4 30.09
Solyc09g014540.1.1 Tomato cytosol 19.11 29.7
PGSC0003DMT400041446 Potato cytosol 28.03 29.33
CDY11541 Canola cytosol 28.03 28.39
CDY09498 Canola cytosol 26.11 28.08
CDY03712 Canola cytosol 25.48 27.4
PGSC0003DMT400044158 Potato cytosol 23.57 25.69
PGSC0003DMT400020053 Potato cytosol 40.13 21.28
PGSC0003DMT400075928 Potato cytosol 39.49 20.88
Protein Annotations
Gene3D:3.30.530.20MapMan:35.1GO:A0A078HS81UniProt:A0A078HS81InterPro:Bet_v_I/MLPEnsemblPlants:CDY41465
ProteinID:CDY41465ProteinID:CDY41465.1GO:GO:0006950GO:GO:0006952GO:GO:0008150GO:GO:0009607
EnsemblPlantsGene:GSBRNA2T00073067001InterPro:IPR023393PFAM:PF00407PANTHER:PTHR31907PANTHER:PTHR31907:SF4SMART:SM01037
SUPFAM:SSF55961InterPro:START-like_dom_sfUniParc:UPI0004EE059F:::
Description
BnaA08g20670DBnaA08g20670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HS81]
Coordinates
chrLK032498:-:127875..128788
Molecular Weight (calculated)
17919.3 Da
IEP (calculated)
4.821
GRAVY (calculated)
-0.316
Length
157 amino acids
Sequence
(BLAST)
001: MAQSSLFGEL EVEVEIKSSA AKFYHMYAGT PHHVANATPR NVQACDLHDG EWGEVGSIIF WNYVHDGQAK VAKERIEVVE PEKKLVKFRV LEGDLMEEFK
101: SFLITIKVTP KQGGSGSIVK WHFEYEKIDE NISHPETLLP FFADMIKEID EHLLSEE
Best Arabidopsis Sequence Match ( AT5G28010.2 )
(BLAST)
001: MAEKVEVTTM PKSSLLGKLE VEVEIKAPAA IFYHIYAGRP HHVAKATPRN VQSCDLHDGE WGTVGSIVYW NYVHEGQAKV AKERIELVEP EKKLIKFRVI
101: EGDVMAEYKS FLITIQVTPK EGGTGSVVKW HIEYEKIDEN VPHPENLLPF FAEMTKEIDE HLLSEE
Arabidopsis Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K5S5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.