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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:extracellular
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012363.1-P Field mustard cytosol 98.74 97.52
CDY12482 Canola cytosol 72.33 92.0
AT1G23130.1 Thale cress cytosol 61.64 61.25
CDY41463 Canola cytosol 55.97 55.28
CDY12480 Canola cytosol 55.35 54.66
CDY12485 Canola cytosol 33.96 54.55
CDY03715 Canola cytosol 54.72 53.05
CDY09495 Canola cytosol 52.2 52.53
CDY65619 Canola cytosol 54.09 52.44
CDY25772 Canola cytosol 52.2 52.2
CDY23474 Canola cytosol 52.83 51.53
CDX68328 Canola cytosol 52.83 51.22
CDY41465 Canola cytosol 50.31 50.96
CDX91696 Canola cytosol 49.69 50.32
CDY12484 Canola cytosol 50.31 50.0
CDY09499 Canola cytosol 41.51 48.18
CDX96283 Canola cytosol 39.62 45.65
CDX72752 Canola cytosol 39.62 45.65
CDX72753 Canola cytosol 45.28 45.57
CDY03713 Canola cytosol 40.88 42.21
CDX89696 Canola cytosol 39.62 41.72
CDY17433 Canola cytosol 39.62 41.72
CDY21418 Canola cytosol 47.17 41.21
CDY70076 Canola cytosol 36.48 40.0
CDY00801 Canola cytosol 42.77 38.42
CDY03718 Canola cytosol 54.72 37.99
CDY09492 Canola cytosol 53.46 37.12
CDY68859 Canola cytosol 33.33 36.55
CDY16542 Canola cytosol 30.82 36.3
VIT_01s0011g05170.t01 Wine grape cytosol 14.47 35.94
KRH37979 Soybean cytosol 33.96 34.84
CDX92456 Canola cytosol 29.56 34.81
VIT_01s0011g05150.t01 Wine grape cytosol 30.19 34.78
PGSC0003DMT400075925 Potato cytosol 24.53 33.62
VIT_01s0011g05190.t01 Wine grape cytosol 30.82 32.45
KRH13947 Soybean cytosol 29.56 30.32
Solyc01g081130.2.1 Tomato cytosol 14.47 30.26
PGSC0003DMT400056811 Potato cytosol 24.53 30.23
VIT_01s0011g05180.t01 Wine grape cytosol 28.3 29.8
KRH13946 Soybean cytosol 28.93 29.68
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 27.67 29.33
Solyc09g005500.2.1 Tomato extracellular 27.67 29.14
PGSC0003DMT400022679 Potato cytosol 27.67 29.14
PGSC0003DMT400077743 Potato cytosol 27.67 29.14
Solyc04g007830.2.1 Tomato cytosol 24.53 29.1
KRH13944 Soybean cytosol 25.16 28.57
PGSC0003DMT400041455 Potato cytosol 27.04 28.48
PGSC0003DMT400041449 Potato cytosol 20.13 28.07
PGSC0003DMT400031386 Potato cytosol 25.79 27.15
CDX96282 Canola cytosol 20.75 27.05
Solyc05g046150.2.1 Tomato cytosol, extracellular 25.16 26.67
PGSC0003DMT400021866 Potato cytosol 25.16 26.32
PGSC0003DMT400031542 Potato cytosol 25.16 26.14
Solyc09g014530.2.1 Tomato cytosol, extracellular 24.53 26.0
PGSC0003DMT400021868 Potato cytosol 24.53 26.0
PGSC0003DMT400073916 Potato cytosol 19.5 25.83
PGSC0003DMT400025419 Potato cytosol 21.38 25.76
PGSC0003DMT400091938 Potato cytosol 24.53 25.16
Solyc05g046160.1.1 Tomato cytosol 10.06 25.0
PGSC0003DMT400021867 Potato cytosol 23.9 25.0
Solyc09g014580.2.1 Tomato cytosol 23.9 25.0
PGSC0003DMT400073915 Potato cytosol 23.9 24.84
PGSC0003DMT400022721 Potato cytosol 23.9 24.84
PGSC0003DMT400025429 Potato cytosol 23.27 24.67
Solyc09g005400.2.1 Tomato cytosol 23.27 24.67
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 24.53 24.53
Solyc09g014550.2.1 Tomato cytosol 23.27 24.34
PGSC0003DMT400004549 Potato cytosol 23.27 24.34
Solyc09g014560.1.1 Tomato cytosol 11.32 24.32
Solyc09g005420.2.1 Tomato cytosol 22.64 24.0
PGSC0003DMT400041446 Potato cytosol 22.64 24.0
PGSC0003DMT400025420 Potato cytosol 22.01 23.18
CDY41464 Canola cytosol 21.38 23.13
Solyc09g005410.1.1 Tomato cytosol 19.5 22.79
CDY03712 Canola cytosol 20.75 22.6
CDY09498 Canola cytosol 20.13 21.92
Solyc05g046220.1.1 Tomato cytosol 13.21 21.88
Solyc09g014540.1.1 Tomato cytosol 13.84 21.78
PGSC0003DMT400059724 Potato cytosol 27.67 20.37
PGSC0003DMT400044158 Potato cytosol 18.24 20.14
CDY11541 Canola cytosol 18.87 19.35
CDX91697 Canola cytosol 17.61 18.92
CDY41462 Canola cytosol 16.98 18.49
PGSC0003DMT400075928 Potato cytosol 28.3 15.15
PGSC0003DMT400020053 Potato cytosol 27.67 14.86
Protein Annotations
EnsemblPlants:CDY25771EnsemblPlantsGene:GSBRNA2T00033168001Gene3D:3.30.530.20GO:A0A078GK55GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PANTHER:PTHR31907:SF4PFAM:PF00407ProteinID:CDY25771ProteinID:CDY25771.1SMART:SM01037SUPFAM:SSF55961
UniParc:UPI0004EDAEBAUniProt:A0A078GK55MapMan:35.1:::
Description
BnaA07g10110DBnaA07g10110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GK55]
Coordinates
chrLK032180:+:242262..243367
Molecular Weight (calculated)
17999.9 Da
IEP (calculated)
7.411
GRAVY (calculated)
-0.416
Length
159 amino acids
Sequence
(BLAST)
001: MVQAQSYMVG EIETSIEIKA PAQKYYHMLT GKPKDLPEAS PDNLQRCDVL EGEPGKVGRI LSWNYVTNGQ PKVMKERIEA LEPEKNLIVA RVIGGDLMKE
101: FKNFFLTIQA TPKQRGPGSV VKCHLKYERI DKKVADPEDI LVLFVNASRD MDKMLSSEF
Best Arabidopsis Sequence Match ( AT1G23130.1 )
(BLAST)
001: MAQATRQSSL QGELEVDIEI KASAKKFHHM LSGRPQDVAK ATPDIQGCAL HEGEFGKVGS VIFWNYAIDG QPKVARERIE AVDQEKNLLV LRVIDGDLTK
101: EFKSFLVTIQ ATPKLRGPGS VVKCHLKYER IDEKVAPPEK LLELFAKLTE SMDEMLLSEV
Arabidopsis Description
At1g23130/T26J12_10 [Source:UniProtKB/TrEMBL;Acc:O49304]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.