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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:peroxisome
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17433 Canola cytosol 90.07 90.07
AT1G35260.1 Thale cress cytosol 72.85 72.37
AT1G35310.1 Thale cress cytosol 70.2 70.2
CDY65619 Canola cytosol 57.62 53.05
CDY03715 Canola cytosol 56.95 52.44
CDY09495 Canola cytosol 53.64 51.27
CDX68328 Canola cytosol 55.63 51.22
CDY23474 Canola cytosol 54.97 50.92
CDX91696 Canola cytosol 52.32 50.32
CDY41465 Canola cytosol 51.66 49.68
CDX72752 Canola cytosol 43.71 47.83
CDY12484 Canola cytosol 49.67 46.88
CDY09499 Canola cytosol 42.38 46.72
CDY12485 Canola cytosol 30.46 46.46
CDX96283 Canola cytosol 42.38 46.38
CDX72753 Canola cytosol 48.34 46.2
CDY12480 Canola cytosol 49.01 45.96
CDY41463 Canola cytosol 48.34 45.34
CDY21418 Canola cytosol 52.98 43.96
CDY25772 Canola cytosol 45.03 42.77
CDY70076 Canola cytosol 39.74 41.38
CDY16542 Canola cytosol 35.76 40.0
CDY12482 Canola cytosol 33.11 40.0
CDY25771 Canola cytosol 41.72 39.62
CDY68859 Canola cytosol 37.75 39.31
CDY03713 Canola cytosol 39.74 38.96
CDY00801 Canola cytosol 45.03 38.42
CDX92456 Canola cytosol 33.11 37.04
CDY03718 Canola cytosol 54.97 36.24
CDY09492 Canola cytosol 53.64 35.37
PGSC0003DMT400031542 Potato cytosol 35.76 35.29
PGSC0003DMT400041449 Potato cytosol 26.49 35.09
PGSC0003DMT400073916 Potato cytosol 27.81 35.0
PGSC0003DMT400025419 Potato cytosol 30.46 34.85
PGSC0003DMT400041446 Potato cytosol 34.44 34.67
PGSC0003DMT400073915 Potato cytosol 35.1 34.64
PGSC0003DMT400022721 Potato cytosol 35.1 34.64
VIT_01s0011g05170.t01 Wine grape cytosol 14.57 34.38
VIT_01s0011g05150.t01 Wine grape cytosol 31.13 34.06
PGSC0003DMT400025429 Potato cytosol 33.77 34.0
PGSC0003DMT400075925 Potato cytosol 25.83 33.62
VIT_01s0011g05190.t01 Wine grape cytosol 33.11 33.11
PGSC0003DMT400022679 Potato cytosol 33.11 33.11
Solyc01g081130.2.1 Tomato cytosol 16.56 32.89
Solyc09g005420.2.1 Tomato cytosol 32.45 32.67
PGSC0003DMT400021866 Potato cytosol 32.45 32.24
Solyc09g014550.2.1 Tomato cytosol 32.45 32.24
Solyc09g014580.2.1 Tomato cytosol 32.45 32.24
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 33.77 32.08
VIT_01s0011g05180.t01 Wine grape cytosol 31.79 31.79
PGSC0003DMT400077743 Potato cytosol 31.79 31.79
PGSC0003DMT400031386 Potato cytosol 31.79 31.79
PGSC0003DMT400056811 Potato cytosol 27.15 31.78
PGSC0003DMT400021867 Potato cytosol 31.79 31.58
Solyc09g005400.2.1 Tomato cytosol 31.13 31.33
Solyc09g014530.2.1 Tomato cytosol, extracellular 31.13 31.33
PGSC0003DMT400021868 Potato cytosol 31.13 31.33
PGSC0003DMT400025420 Potato cytosol 31.13 31.13
Solyc09g005410.1.1 Tomato cytosol 27.81 30.88
PGSC0003DMT400041455 Potato cytosol 30.46 30.46
Solyc09g005500.2.1 Tomato extracellular 30.46 30.46
KRH13946 Soybean cytosol 30.46 29.68
KRH37979 Soybean cytosol 30.46 29.68
KRH13947 Soybean cytosol 29.8 29.03
CDX96282 Canola cytosol 23.18 28.69
Solyc09g014560.1.1 Tomato cytosol 13.91 28.38
Solyc04g007830.2.1 Tomato cytosol 25.17 28.36
PGSC0003DMT400004549 Potato cytosol 28.48 28.29
Solyc05g046160.1.1 Tomato cytosol 11.92 28.12
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 27.81 28.0
Solyc09g014540.1.1 Tomato cytosol 18.54 27.72
CDY41464 Canola cytosol 25.17 25.85
PGSC0003DMT400091938 Potato cytosol 26.49 25.81
CDY09498 Canola cytosol 24.5 25.34
Solyc05g046150.2.1 Tomato cytosol, extracellular 25.17 25.33
Solyc05g046220.1.1 Tomato cytosol 15.89 25.0
CDX91697 Canola cytosol 24.5 25.0
CDY41462 Canola cytosol 23.84 24.66
CDY03712 Canola cytosol 23.84 24.66
CDY11541 Canola cytosol 25.17 24.52
KRH13944 Soybean cytosol 19.87 21.43
PGSC0003DMT400059724 Potato cytosol 30.46 21.3
PGSC0003DMT400044158 Potato cytosol 19.87 20.83
PGSC0003DMT400020053 Potato cytosol 30.46 15.54
PGSC0003DMT400075928 Potato cytosol 28.48 14.48
Protein Annotations
EnsemblPlants:CDX89696EnsemblPlantsGene:GSBRNA2T00150099001Gene3D:3.30.530.20GO:A0A078DKD7GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PFAM:PF00407ProteinID:CDX89696ProteinID:CDX89696.1SEG:segSMART:SM01037SUPFAM:SSF55961
UniParc:UPI0004EB69ACMapMan:35.1::::
Description
BnaC03g46100D
Coordinates
chrLK031860:+:881258..881924
Molecular Weight (calculated)
17417.0 Da
IEP (calculated)
6.129
GRAVY (calculated)
-0.426
Length
151 amino acids
Sequence
(BLAST)
001: MVKEEVEVDV EIKSPANKFH MFVGRLQHVP KATRYIQGYD LLEGDWGMVG SIVLWKLISD GETRVSKDRI EAMDFEKKVI QWRVLEGPLK TEYNSLLKTM
101: KVSPNHGGPG STVKWNVKYE RIDENVAHPE RLLQFLVEVT KQVDGYLLSE E
Best Arabidopsis Sequence Match ( AT1G35260.1 )
(BLAST)
001: MIEEEIEVDV DIKTRADKFH KFIRRSQHVP KATHYIKGCD LLEGEWGKVG SILLWKLVFD GEPRVSKDMI EVIDEEKNVI QLRVLEGPLK KEYKSFLKTM
101: KVMSPKHGGP GSVVKWNMKY ERIDQNVDHP NRLLQFFVEV TKEIDQYLLS KD
Arabidopsis Description
MLP165MLP-like protein 165 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7I7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.