Skip to main content
crop-pal logo
Potato
Search for another protein from :
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400030176
PGSC0003DMT400030222
PGSC0003DMT400055428

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70830.1 PGSC0003DMT400030176 AT5G43080.1 20706207
AT1G70830.1 PGSC0003DMT400030222 AT5G43080.1 20706207
AT1G70830.1 PGSC0003DMT400055428 AT5G43080.1 20706207
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400041449 Potato cytosol 66.0 86.84
Solyc09g005410.1.1 Tomato cytosol 78.67 86.76
PGSC0003DMT400025429 Potato cytosol 84.67 84.67
PGSC0003DMT400025419 Potato cytosol 72.0 81.82
PGSC0003DMT400025420 Potato cytosol 81.33 80.79
PGSC0003DMT400021868 Potato cytosol 79.33 79.33
PGSC0003DMT400021867 Potato cytosol 77.33 76.32
PGSC0003DMT400021866 Potato cytosol 76.0 75.0
PGSC0003DMT400004549 Potato cytosol 74.67 73.68
PGSC0003DMT400031542 Potato cytosol 62.0 60.78
PGSC0003DMT400073915 Potato cytosol 60.0 58.82
PGSC0003DMT400022721 Potato cytosol 59.33 58.17
PGSC0003DMT400073916 Potato cytosol 45.33 56.67
VIT_01s0011g05170.t01 Wine grape cytosol 19.33 45.31
PGSC0003DMT400056811 Potato cytosol 38.0 44.19
PGSC0003DMT400077743 Potato cytosol 43.33 43.05
PGSC0003DMT400022679 Potato cytosol 43.33 43.05
PGSC0003DMT400041455 Potato cytosol 42.67 42.38
VIT_01s0011g05190.t01 Wine grape cytosol 42.0 41.72
VIT_01s0011g05180.t01 Wine grape cytosol 38.67 38.41
VIT_01s0011g05150.t01 Wine grape cytosol 34.67 37.68
PGSC0003DMT400091938 Potato cytosol 37.33 36.13
PGSC0003DMT400031386 Potato cytosol 35.33 35.1
AT1G70890.1 Thale cress cytosol 36.67 34.81
AT1G70860.2 Thale cress cytosol 17.33 34.67
CDX89696 Canola cytosol 34.67 34.44
PGSC0003DMT400075925 Potato cytosol 25.33 32.76
Bra016180.1-P Field mustard cytosol 30.0 32.61
CDY17433 Canola cytosol 32.67 32.45
CDY65619 Canola cytosol 35.33 32.32
CDY03715 Canola cytosol 35.33 32.32
CDX72752 Canola cytosol 29.33 31.88
AT1G35310.1 Thale cress cytosol 32.0 31.79
CDY09495 Canola cytosol 33.33 31.65
KRH37979 Soybean cytosol 32.67 31.61
AT1G35260.1 Thale cress cytosol 32.0 31.58
Bra007946.1-P Field mustard cytosol 28.67 31.39
AT5G28010.2 Thale cress cytosol 34.67 31.33
KRH13947 Soybean cytosol 32.0 30.97
Bra003939.1-P Field mustard cytosol 33.33 30.67
CDX68328 Canola cytosol 33.33 30.49
AT1G70840.1 Thale cress cytosol 34.67 30.41
CDY23474 Canola cytosol 32.67 30.06
Bra012362.1-P Field mustard cytosol 32.0 30.0
CDY12484 Canola cytosol 32.0 30.0
CDY03713 Canola cytosol 30.67 29.87
CDX96283 Canola cytosol 27.33 29.71
Bra016181.1-P Field mustard cytosol 27.33 29.71
CDY25772 Canola cytosol 30.67 28.93
Bra012364.1-P Field mustard cytosol 30.67 28.93
AT1G70880.1 Thale cress cytosol 30.67 28.93
Bra007947.1-P Field mustard cytosol 30.0 28.48
PGSC0003DMT400044158 Potato cytosol 27.33 28.47
AT1G23130.1 Thale cress cytosol 30.0 28.12
CDX91696 Canola cytosol 29.33 28.03
CDY41465 Canola cytosol 29.33 28.03
Bra016364.1-P Field mustard cytosol 29.33 28.03
CDY12480 Canola cytosol 30.0 27.95
CDY09499 Canola cytosol 25.33 27.74
PGSC0003DMT400059724 Potato cytosol 39.33 27.31
KRH13944 Soybean cytosol 25.33 27.14
AT5G28000.1 Thale cress cytosol 29.33 26.83
Bra016178.1-P Field mustard cytosol 28.0 26.58
CDY00801 Canola cytosol 31.33 26.55
KRH13946 Soybean cytosol 27.33 26.45
Bra016362.1-P Field mustard cytosol 28.0 26.09
CDY41463 Canola cytosol 28.0 26.09
CDX72753 Canola cytosol 27.33 25.95
CDY16542 Canola cytosol 23.33 25.93
CDX92456 Canola cytosol 23.33 25.93
Bra016179.1-P Field mustard cytosol 25.33 25.85
Bra024564.1-P Field mustard cytosol 31.33 25.82
CDY21418 Canola cytosol 31.33 25.82
Bra016182.1-P Field mustard cytosol 35.33 25.48
Bra002309.1-P Field mustard cytosol 22.67 25.19
CDY12485 Canola cytosol 16.0 24.24
CDY12482 Canola cytosol 20.0 24.0
CDY09492 Canola cytosol 36.0 23.58
CDY03718 Canola cytosol 36.0 23.58
Bra007945.1-P Field mustard cytosol 36.0 23.58
Bra012361.1-P Field mustard cytosol 21.33 23.02
CDY25771 Canola cytosol 24.0 22.64
Bra012363.1-P Field mustard cytosol 24.0 22.36
CDX96282 Canola cytosol 18.0 22.13
CDY70076 Canola cytosol 19.33 20.0
PGSC0003DMT400020053 Potato cytosol 39.33 19.93
PGSC0003DMT400075928 Potato cytosol 39.33 19.87
CDY11541 Canola cytosol 19.33 18.71
CDY68859 Canola cytosol 18.0 18.62
Bra007949.1-P Field mustard cytosol 30.67 18.25
AT1G70850.1 Thale cress cytosol 37.33 17.72
AT1G70830.1 Thale cress cytosol 36.0 16.12
Protein Annotations
EnsemblPlants:PGSC0003DMT400041446EnsemblPlantsGene:PGSC0003DMG400016065Gene3D:3.30.530.20GO:GO:0006950GO:GO:0006952GO:GO:0008150
GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907PANTHER:PTHR31907:SF4
PFAM:PF00407PGSC:PGSC0003DMG400016065SMART:SM01037SUPFAM:SSF55961UniParc:UPI0002953E84UniProt:M1BBE3
MapMan:35.1:::::
Description
Major latex [Source:PGSC_GENE;Acc:PGSC0003DMG400016065]
Coordinates
chr00:+:25747292..25748307
Molecular Weight (calculated)
17068.4 Da
IEP (calculated)
5.030
GRAVY (calculated)
-0.272
Length
150 amino acids
Sequence
(BLAST)
001: MGLKSVLCAK IEMKANKDIF HDVFTNKPHH VSAMSPLHVQ GFDLLEGDIG TVGFKVCWTY TLDGEKNISK QILEAIDHEN KVLTLKEFEG DVTDKYDSFK
101: ATLHIETKDE IDLVSWTLDF ERPNENVPEL IRLLNFIVGM TKVVDDHHGN
Best Arabidopsis Sequence Match ( AT1G70830.5 )
(BLAST)
001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEE
Arabidopsis Description
MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.