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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012362.1-P Field mustard cytosol 97.5 97.5
CDY41465 Canola cytosol 75.0 76.43
CDX91696 Canola cytosol 75.0 76.43
CDY12485 Canola cytosol 44.38 71.72
AT5G28010.2 Thale cress cytosol 73.12 70.48
AT5G28000.1 Thale cress cytosol 64.38 62.8
CDY03715 Canola cytosol 61.25 59.76
CDY09495 Canola cytosol 58.75 59.49
CDY65619 Canola cytosol 60.62 59.15
CDX68328 Canola cytosol 59.38 57.93
CDY23474 Canola cytosol 58.75 57.67
CDY12480 Canola cytosol 56.88 56.52
CDX72752 Canola cytosol 46.88 54.35
CDX96283 Canola cytosol 46.88 54.35
CDY25772 Canola cytosol 53.75 54.09
CDX72753 Canola cytosol 53.12 53.8
CDY41463 Canola cytosol 52.5 52.17
CDY12482 Canola cytosol 40.0 51.2
CDY09499 Canola cytosol 43.75 51.09
CDY25771 Canola cytosol 50.0 50.31
CDX89696 Canola cytosol 46.88 49.67
VIT_01s0011g05170.t01 Wine grape cytosol 19.38 48.44
CDY17433 Canola cytosol 45.0 47.68
CDY00801 Canola cytosol 52.5 47.46
CDY03713 Canola cytosol 45.62 47.4
CDY21418 Canola cytosol 53.12 46.7
CDY03718 Canola cytosol 63.12 44.1
VIT_01s0011g05190.t01 Wine grape cytosol 41.25 43.71
CDY70076 Canola cytosol 39.38 43.45
CDY09492 Canola cytosol 61.88 43.23
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 38.75 41.33
VIT_01s0011g05150.t01 Wine grape cytosol 35.62 41.3
KRH13947 Soybean cytosol 40.0 41.29
Solyc05g046160.1.1 Tomato cytosol 16.25 40.62
CDY16542 Canola cytosol 33.75 40.0
CDY68859 Canola cytosol 35.62 39.31
Solyc04g007830.2.1 Tomato cytosol 32.5 38.81
CDX92456 Canola cytosol 32.5 38.52
VIT_01s0011g05180.t01 Wine grape cytosol 35.62 37.75
KRH37979 Soybean cytosol 36.25 37.42
PGSC0003DMT400075925 Potato cytosol 26.88 37.07
CDX96282 Canola cytosol 28.12 36.89
KRH13946 Soybean cytosol 35.62 36.77
PGSC0003DMT400041455 Potato cytosol 34.38 36.42
PGSC0003DMT400031386 Potato cytosol 34.38 36.42
PGSC0003DMT400022679 Potato cytosol 34.38 36.42
Solyc05g046150.2.1 Tomato cytosol, extracellular 33.75 36.0
PGSC0003DMT400077743 Potato cytosol 33.75 35.76
Solyc09g005500.2.1 Tomato extracellular 33.75 35.76
PGSC0003DMT400056811 Potato cytosol 28.75 35.66
PGSC0003DMT400025419 Potato cytosol 29.38 35.61
PGSC0003DMT400073916 Potato cytosol 26.25 35.0
PGSC0003DMT400021867 Potato cytosol 33.12 34.87
Solyc05g046220.1.1 Tomato cytosol 20.62 34.38
PGSC0003DMT400021866 Potato cytosol 32.5 34.21
Solyc01g081130.2.1 Tomato cytosol 16.25 34.21
PGSC0003DMT400041449 Potato cytosol 24.38 34.21
PGSC0003DMT400025429 Potato cytosol 31.88 34.0
PGSC0003DMT400031542 Potato cytosol 32.5 33.99
Solyc09g014580.2.1 Tomato cytosol 31.88 33.55
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 33.12 33.33
Solyc09g005420.2.1 Tomato cytosol 31.25 33.33
Solyc09g014530.2.1 Tomato cytosol, extracellular 31.25 33.33
PGSC0003DMT400073915 Potato cytosol 31.88 33.33
Solyc09g005410.1.1 Tomato cytosol 28.12 33.09
Solyc09g014550.2.1 Tomato cytosol 31.25 32.89
PGSC0003DMT400022721 Potato cytosol 31.25 32.68
PGSC0003DMT400021868 Potato cytosol 30.62 32.67
PGSC0003DMT400091938 Potato cytosol 31.25 32.26
PGSC0003DMT400041446 Potato cytosol 30.0 32.0
Solyc09g005400.2.1 Tomato cytosol 30.0 32.0
PGSC0003DMT400025420 Potato cytosol 30.0 31.79
PGSC0003DMT400004549 Potato cytosol 30.0 31.58
Solyc09g014540.1.1 Tomato cytosol 19.38 30.69
CDY41464 Canola cytosol 28.12 30.61
KRH13944 Soybean cytosol 26.25 30.0
CDY41462 Canola cytosol 26.25 28.77
CDY11541 Canola cytosol 27.5 28.39
Solyc09g014560.1.1 Tomato cytosol 13.12 28.38
PGSC0003DMT400059724 Potato cytosol 37.5 27.78
CDX91697 Canola cytosol 25.62 27.7
CDY09498 Canola cytosol 22.5 24.66
CDY03712 Canola cytosol 21.88 23.97
PGSC0003DMT400044158 Potato cytosol 18.12 20.14
PGSC0003DMT400020053 Potato cytosol 36.88 19.93
PGSC0003DMT400075928 Potato cytosol 35.62 19.19
Protein Annotations
EnsemblPlants:CDY12484EnsemblPlantsGene:GSBRNA2T00061794001Gene3D:3.30.530.20GO:A0A078FHL0GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PANTHER:PTHR31907:SF4PFAM:PF00407ProteinID:CDY12484ProteinID:CDY12484.1SEG:segSMART:SM01037
SUPFAM:SSF55961UniParc:UPI0004EE5F0CUniProt:A0A078FHL0MapMan:35.1::
Description
BnaC07g13240DBnaC07g13240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHL0]
Coordinates
chrLK032023:-:215566..216306
Molecular Weight (calculated)
18207.7 Da
IEP (calculated)
4.281
GRAVY (calculated)
-0.313
Length
160 amino acids
Sequence
(BLAST)
001: MEDMPESSLV GEVEVEVEIK APAEKFYEMY TGKAHHVAEA TPQNVQACDL HDGDWGTLDS VIVWNYVHDG QAKVAKERIE LVEPEKKPVK FRVIEGDLMD
101: DFKSLLITIQ VTPEQGGLGS VVKLHFDYEK IDENVVHPET LLPFFVQMIK EIDQHLMSEE
Best Arabidopsis Sequence Match ( AT5G28010.2 )
(BLAST)
001: MAEKVEVTTM PKSSLLGKLE VEVEIKAPAA IFYHIYAGRP HHVAKATPRN VQSCDLHDGE WGTVGSIVYW NYVHEGQAKV AKERIELVEP EKKLIKFRVI
101: EGDVMAEYKS FLITIQVTPK EGGTGSVVKW HIEYEKIDEN VPHPENLLPF FAEMTKEIDE HLLSEE
Arabidopsis Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K5S5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.