Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
PGSC0003DMT400030176 | |
PGSC0003DMT400030222 | |
PGSC0003DMT400055428 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT1G70830.1 | PGSC0003DMT400030176 | AT5G43080.1 | 20706207 |
AT1G70830.1 | PGSC0003DMT400030222 | AT5G43080.1 | 20706207 |
AT1G70830.1 | PGSC0003DMT400055428 | AT5G43080.1 | 20706207 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400021866 | Potato | cytosol | 84.87 | 84.87 |
PGSC0003DMT400021868 | Potato | cytosol | 83.55 | 84.67 |
PGSC0003DMT400025429 | Potato | cytosol | 78.95 | 80.0 |
PGSC0003DMT400004549 | Potato | cytosol | 78.95 | 78.95 |
PGSC0003DMT400041449 | Potato | cytosol | 58.55 | 78.07 |
PGSC0003DMT400041446 | Potato | cytosol | 76.32 | 77.33 |
PGSC0003DMT400025420 | Potato | cytosol | 75.66 | 76.16 |
PGSC0003DMT400025419 | Potato | cytosol | 65.13 | 75.0 |
PGSC0003DMT400022721 | Potato | cytosol | 67.11 | 66.67 |
PGSC0003DMT400073915 | Potato | cytosol | 67.11 | 66.67 |
PGSC0003DMT400031542 | Potato | cytosol | 67.11 | 66.67 |
PGSC0003DMT400073916 | Potato | cytosol | 51.32 | 65.0 |
VIT_01s0011g05170.t01 | Wine grape | cytosol | 18.42 | 43.75 |
PGSC0003DMT400077743 | Potato | cytosol | 41.45 | 41.72 |
PGSC0003DMT400041455 | Potato | cytosol | 41.45 | 41.72 |
PGSC0003DMT400056811 | Potato | cytosol | 34.87 | 41.09 |
PGSC0003DMT400022679 | Potato | cytosol | 40.79 | 41.06 |
VIT_01s0011g05150.t01 | Wine grape | cytosol | 36.84 | 40.58 |
PGSC0003DMT400031386 | Potato | cytosol | 39.47 | 39.74 |
VIT_01s0011g05190.t01 | Wine grape | cytosol | 38.82 | 39.07 |
VIT_01s0011g05180.t01 | Wine grape | cytosol | 38.82 | 39.07 |
PGSC0003DMT400091938 | Potato | cytosol | 37.5 | 36.77 |
AT1G70890.1 | Thale cress | cytosol | 37.5 | 36.08 |
AT1G70860.2 | Thale cress | cytosol | 17.76 | 36.0 |
AT1G70840.1 | Thale cress | cytosol | 38.82 | 34.5 |
CDY09495 | Canola | cytosol | 35.53 | 34.18 |
Bra012362.1-P | Field mustard | cytosol | 34.87 | 33.12 |
CDY12484 | Canola | cytosol | 34.87 | 33.12 |
AT1G35310.1 | Thale cress | cytosol | 32.89 | 33.11 |
Bra007947.1-P | Field mustard | cytosol | 34.21 | 32.91 |
KRH37979 | Soybean | cytosol | 33.55 | 32.9 |
KRH13947 | Soybean | cytosol | 33.55 | 32.9 |
Bra007946.1-P | Field mustard | cytosol | 29.61 | 32.85 |
PGSC0003DMT400075925 | Potato | cytosol | 25.0 | 32.76 |
Bra016180.1-P | Field mustard | cytosol | 29.61 | 32.61 |
CDY65619 | Canola | cytosol | 34.87 | 32.32 |
CDY03715 | Canola | cytosol | 34.87 | 32.32 |
AT1G35260.1 | Thale cress | cytosol | 32.24 | 32.24 |
CDY09499 | Canola | cytosol | 28.95 | 32.12 |
Bra003939.1-P | Field mustard | cytosol | 34.21 | 31.9 |
CDX72752 | Canola | cytosol | 28.95 | 31.88 |
Bra016364.1-P | Field mustard | cytosol | 32.89 | 31.85 |
CDY41465 | Canola | cytosol | 32.89 | 31.85 |
CDX89696 | Canola | cytosol | 31.58 | 31.79 |
AT1G70880.1 | Thale cress | cytosol | 32.89 | 31.45 |
AT5G28010.2 | Thale cress | cytosol | 34.21 | 31.33 |
CDY23474 | Canola | cytosol | 33.55 | 31.29 |
CDX91696 | Canola | cytosol | 32.24 | 31.21 |
CDX96283 | Canola | cytosol | 28.29 | 31.16 |
Bra016181.1-P | Field mustard | cytosol | 28.29 | 31.16 |
CDY17433 | Canola | cytosol | 30.92 | 31.13 |
CDX68328 | Canola | cytosol | 33.55 | 31.1 |
CDY25772 | Canola | cytosol | 32.24 | 30.82 |
Bra012364.1-P | Field mustard | cytosol | 32.24 | 30.82 |
CDY03713 | Canola | cytosol | 30.26 | 29.87 |
CDY16542 | Canola | cytosol | 26.32 | 29.63 |
AT1G23130.1 | Thale cress | cytosol | 30.92 | 29.38 |
AT5G28000.1 | Thale cress | cytosol | 31.58 | 29.27 |
Bra016182.1-P | Field mustard | cytosol | 39.47 | 28.85 |
Bra012361.1-P | Field mustard | cytosol | 26.32 | 28.78 |
CDY12480 | Canola | cytosol | 30.26 | 28.57 |
Bra016178.1-P | Field mustard | cytosol | 29.61 | 28.48 |
PGSC0003DMT400044158 | Potato | cytosol | 26.97 | 28.47 |
KRH13946 | Soybean | cytosol | 28.95 | 28.39 |
CDY12485 | Canola | cytosol | 18.42 | 28.28 |
CDY00801 | Canola | cytosol | 32.89 | 28.25 |
CDX92456 | Canola | cytosol | 25.0 | 28.15 |
CDY21418 | Canola | cytosol | 33.55 | 28.02 |
Bra024564.1-P | Field mustard | cytosol | 33.55 | 28.02 |
Bra016179.1-P | Field mustard | cytosol | 26.97 | 27.89 |
KRH13944 | Soybean | cytosol | 25.66 | 27.86 |
CDX72753 | Canola | cytosol | 28.95 | 27.85 |
Bra002309.1-P | Field mustard | cytosol | 24.34 | 27.41 |
Bra016362.1-P | Field mustard | cytosol | 28.95 | 27.33 |
CDY41463 | Canola | cytosol | 28.95 | 27.33 |
PGSC0003DMT400059724 | Potato | cytosol | 38.82 | 27.31 |
CDY12482 | Canola | cytosol | 22.37 | 27.2 |
CDX96282 | Canola | cytosol | 20.39 | 25.41 |
Bra007945.1-P | Field mustard | cytosol | 38.16 | 25.33 |
CDY03718 | Canola | cytosol | 38.16 | 25.33 |
CDY09492 | Canola | cytosol | 38.16 | 25.33 |
CDY25771 | Canola | cytosol | 25.0 | 23.9 |
Bra012363.1-P | Field mustard | cytosol | 25.0 | 23.6 |
CDY70076 | Canola | cytosol | 21.05 | 22.07 |
CDY68859 | Canola | cytosol | 19.74 | 20.69 |
Bra007949.1-P | Field mustard | cytosol | 34.21 | 20.63 |
CDY11541 | Canola | cytosol | 20.39 | 20.0 |
PGSC0003DMT400075928 | Potato | cytosol | 38.82 | 19.87 |
PGSC0003DMT400020053 | Potato | cytosol | 38.16 | 19.59 |
AT1G70850.1 | Thale cress | cytosol | 38.82 | 18.67 |
AT1G70830.1 | Thale cress | cytosol | 36.18 | 16.42 |
Protein Annotations
EnsemblPlants:PGSC0003DMT400021867 | EnsemblPlantsGene:PGSC0003DMG400008486 | Gene3D:3.30.530.20 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 |
GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31907 | PANTHER:PTHR31907:SF4 |
PFAM:PF00407 | PGSC:PGSC0003DMG400008486 | SMART:SM01037 | SUPFAM:SSF55961 | UniParc:UPI0002952AEA | UniProt:M1AFT1 |
MapMan:35.1 | : | : | : | : | : |
Description
Major latex [Source:PGSC_GENE;Acc:PGSC0003DMG400008486]
Coordinates
chr9:+:113655..115122
Molecular Weight (calculated)
17461.1 Da
IEP (calculated)
5.241
GRAVY (calculated)
-0.245
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLKSVLCAK IEMKANKDVF HDVFTNKPHH VSTMCPLHVQ GCELLEGDFG SIGSKICWTY TLDGEKKISK QVIETIDHEN KVLTLKEFEG DLVDKYDNWK
101: ITLHIETKGQ IDLVCWTMEY ERPNENVPEL INLLDFIVSM SIAIDDHHVK MN
101: ITLHIETKGQ IDLVCWTMEY ERPNENVPEL INLLDFIVSM SIAIDDHHVK MN
001: MATKMAGAAM NLAKRESSSL CGKLETDIEI KASAGKFHHM FAGRPHHVSK ATPGKIQGCE LHEGDWGKVG SIVFWNYVHD GEAKVAKERI EAVEPEKNLI
101: TFRVIEGDLL KEYKSFVITI QVTPKRGGPG SVVHWHVEYE KIDDKVAHPE TFLDFCVEVS KEIDEHLLNE E
101: TFRVIEGDLL KEYKSFVITI QVTPKRGGPG SVVHWHVEYE KIDDKVAHPE TFLDFCVEVS KEIDEHLLNE E
Arabidopsis Description
MLP31MLP-like protein 31 [Source:UniProtKB/Swiss-Prot;Acc:Q941R6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.