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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 3
  • mitochondrion 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:extracellular
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400030176
PGSC0003DMT400030222
PGSC0003DMT400055428

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70830.1 PGSC0003DMT400030176 AT5G43080.1 20706207
AT1G70830.1 PGSC0003DMT400030222 AT5G43080.1 20706207
AT1G70830.1 PGSC0003DMT400055428 AT5G43080.1 20706207
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc09g005500.2.1 Tomato extracellular 95.36 95.36
PGSC0003DMT400056811 Potato cytosol 80.79 94.57
PGSC0003DMT400041455 Potato cytosol 94.04 94.04
PGSC0003DMT400022679 Potato cytosol 94.04 94.04
PGSC0003DMT400091938 Potato cytosol 70.86 69.03
PGSC0003DMT400044158 Potato cytosol 62.25 65.28
VIT_01s0011g05170.t01 Wine grape cytosol 21.85 51.56
PGSC0003DMT400021868 Potato cytosol 47.68 48.0
PGSC0003DMT400075925 Potato cytosol 36.42 47.41
PGSC0003DMT400021866 Potato cytosol 47.02 46.71
PGSC0003DMT400025429 Potato cytosol 45.7 46.0
PGSC0003DMT400031542 Potato cytosol 46.36 45.75
VIT_01s0011g05190.t01 Wine grape cytosol 45.7 45.7
PGSC0003DMT400073915 Potato cytosol 45.7 45.1
PGSC0003DMT400022721 Potato cytosol 45.03 44.44
VIT_01s0011g05180.t01 Wine grape cytosol 44.37 44.37
PGSC0003DMT400031386 Potato cytosol 43.71 43.71
PGSC0003DMT400025420 Potato cytosol 43.71 43.71
PGSC0003DMT400004549 Potato cytosol 43.71 43.42
PGSC0003DMT400041446 Potato cytosol 43.05 43.33
VIT_01s0011g05150.t01 Wine grape cytosol 39.07 42.75
PGSC0003DMT400073916 Potato cytosol 33.77 42.5
PGSC0003DMT400041449 Potato cytosol 31.79 42.11
PGSC0003DMT400021867 Potato cytosol 41.72 41.45
PGSC0003DMT400025419 Potato cytosol 35.1 40.15
Bra007947.1-P Field mustard cytosol 41.06 39.24
AT1G70890.1 Thale cress cytosol 40.4 38.61
CDY41465 Canola cytosol 39.74 38.22
Bra016364.1-P Field mustard cytosol 39.74 38.22
CDY09495 Canola cytosol 39.74 37.97
CDY03715 Canola cytosol 41.06 37.8
CDY65619 Canola cytosol 41.06 37.8
KRH37979 Soybean cytosol 38.41 37.42
CDY12485 Canola cytosol 24.5 37.37
AT1G70860.2 Thale cress cytosol 18.54 37.33
Bra003939.1-P Field mustard cytosol 39.74 36.81
AT5G28010.2 Thale cress cytosol 40.4 36.75
CDX68328 Canola cytosol 39.74 36.59
CDY09499 Canola cytosol 33.11 36.5
CDY03713 Canola cytosol 37.09 36.36
CDX91696 Canola cytosol 37.75 36.31
CDY23474 Canola cytosol 39.07 36.2
KRH13947 Soybean cytosol 36.42 35.48
Bra016179.1-P Field mustard cytosol 34.44 35.37
AT1G70840.1 Thale cress cytosol 39.74 35.09
Bra012362.1-P Field mustard cytosol 37.09 35.0
CDY12484 Canola cytosol 35.76 33.75
Bra007946.1-P Field mustard cytosol 30.46 33.58
Bra016178.1-P Field mustard cytosol 34.44 32.91
KRH13946 Soybean cytosol 33.77 32.9
PGSC0003DMT400059724 Potato cytosol 46.36 32.41
CDX72753 Canola cytosol 33.77 32.28
AT1G70880.1 Thale cress cytosol 33.77 32.08
Bra016180.1-P Field mustard cytosol 29.14 31.88
CDX89696 Canola cytosol 31.79 31.79
CDX72752 Canola cytosol 28.48 31.16
AT5G28000.1 Thale cress cytosol 33.11 30.49
CDY17433 Canola cytosol 30.46 30.46
CDY70076 Canola cytosol 29.14 30.34
AT1G23130.1 Thale cress cytosol 31.79 30.0
AT1G35260.1 Thale cress cytosol 29.8 29.61
Bra016182.1-P Field mustard cytosol 40.4 29.33
CDY21418 Canola cytosol 35.1 29.12
Bra024564.1-P Field mustard cytosol 35.1 29.12
Bra016181.1-P Field mustard cytosol 26.49 28.99
CDX96283 Canola cytosol 26.49 28.99
CDY12482 Canola cytosol 23.84 28.8
AT1G35310.1 Thale cress cytosol 28.48 28.48
CDY00801 Canola cytosol 33.11 28.25
Bra002309.1-P Field mustard cytosol 25.17 28.15
CDY16542 Canola cytosol 25.17 28.15
Bra012361.1-P Field mustard cytosol 25.83 28.06
KRH13944 Soybean cytosol 25.83 27.86
CDY25771 Canola cytosol 29.14 27.67
CDY68859 Canola cytosol 26.49 27.59
CDX92456 Canola cytosol 24.5 27.41
Bra012363.1-P Field mustard cytosol 29.14 27.33
CDY12480 Canola cytosol 28.48 26.71
CDY03718 Canola cytosol 40.4 26.64
CDY09492 Canola cytosol 40.4 26.64
Bra007945.1-P Field mustard cytosol 40.4 26.64
CDY41463 Canola cytosol 27.81 26.09
Bra016362.1-P Field mustard cytosol 27.81 26.09
CDX96282 Canola cytosol 20.53 25.41
PGSC0003DMT400020053 Potato cytosol 48.34 24.66
Bra012364.1-P Field mustard cytosol 25.83 24.53
CDY25772 Canola cytosol 25.83 24.53
PGSC0003DMT400075928 Potato cytosol 46.36 23.57
Bra007949.1-P Field mustard cytosol 35.1 21.03
AT1G70850.1 Thale cress cytosol 43.05 20.57
CDY11541 Canola cytosol 20.53 20.0
AT1G70830.1 Thale cress cytosol 40.4 18.21
Protein Annotations
EnsemblPlants:PGSC0003DMT400077743EnsemblPlantsGene:PGSC0003DMG400030243EntrezGene:102590200Gene3D:3.30.530.20GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfncoils:Coil
PANTHER:PTHR31907PANTHER:PTHR31907:SF4PFAM:PF00407PGSC:PGSC0003DMG400030243RefSeq:XP_006367513.1SEG:seg
SMART:SM01037SUPFAM:SSF55961UniParc:UPI000296D4D3UniProt:M1CYV0MapMan:35.1:
Description
Major latex [Source:PGSC_GENE;Acc:PGSC0003DMG400030243]
Coordinates
chr9:-:8067323..8069943
Molecular Weight (calculated)
17391.6 Da
IEP (calculated)
4.899
GRAVY (calculated)
-0.472
Length
151 amino acids
Sequence
(BLAST)
001: MGLKGKLISE TEIKGCKDLF HEMFCEKTHH LPNVVPQTIQ AVDLHEGDWG TVGSIVNWNY TIEGQEKVVK VVVDDINKEK RLVTFKAFEG HLIEEYKAFK
101: ATLHIENEGD NNLVIWTIEY EKQNEDIPEP FSYLQLATNL TKDVDTHHVN Q
Best Arabidopsis Sequence Match ( AT1G70830.5 )
(BLAST)
001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEE
Arabidopsis Description
MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.