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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400030176
PGSC0003DMT400030222
PGSC0003DMT400055428

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70830.1 PGSC0003DMT400030176 AT5G43080.1 20706207
AT1G70830.1 PGSC0003DMT400030222 AT5G43080.1 20706207
AT1G70830.1 PGSC0003DMT400055428 AT5G43080.1 20706207
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc09g005400.2.1 Tomato cytosol 92.0 92.0
PGSC0003DMT400025420 Potato cytosol 89.33 88.74
PGSC0003DMT400041449 Potato cytosol 64.67 85.09
PGSC0003DMT400041446 Potato cytosol 84.67 84.67
PGSC0003DMT400025419 Potato cytosol 71.33 81.06
PGSC0003DMT400021868 Potato cytosol 80.0 80.0
PGSC0003DMT400021867 Potato cytosol 80.0 78.95
PGSC0003DMT400004549 Potato cytosol 78.0 76.97
PGSC0003DMT400021866 Potato cytosol 76.0 75.0
PGSC0003DMT400022721 Potato cytosol 65.33 64.05
PGSC0003DMT400031542 Potato cytosol 65.33 64.05
PGSC0003DMT400073915 Potato cytosol 64.67 63.4
PGSC0003DMT400073916 Potato cytosol 48.67 60.83
PGSC0003DMT400056811 Potato cytosol 40.67 47.29
PGSC0003DMT400077743 Potato cytosol 46.0 45.7
PGSC0003DMT400022679 Potato cytosol 45.33 45.03
PGSC0003DMT400041455 Potato cytosol 45.33 45.03
VIT_01s0011g05150.t01 Wine grape cytosol 38.0 41.3
VIT_01s0011g05170.t01 Wine grape cytosol 17.33 40.62
VIT_01s0011g05190.t01 Wine grape cytosol 40.67 40.4
AT1G70860.2 Thale cress cytosol 20.0 40.0
VIT_01s0011g05180.t01 Wine grape cytosol 39.33 39.07
PGSC0003DMT400091938 Potato cytosol 40.0 38.71
AT1G70890.1 Thale cress cytosol 40.0 37.97
PGSC0003DMT400031386 Potato cytosol 37.33 37.09
PGSC0003DMT400075925 Potato cytosol 28.0 36.21
CDY09495 Canola cytosol 38.0 36.08
CDY65619 Canola cytosol 38.0 34.76
CDY03715 Canola cytosol 38.0 34.76
Bra007946.1-P Field mustard cytosol 31.33 34.31
AT1G70880.1 Thale cress cytosol 36.0 33.96
AT1G70840.1 Thale cress cytosol 38.67 33.92
CDX89696 Canola cytosol 34.0 33.77
Bra003939.1-P Field mustard cytosol 36.67 33.74
AT5G28010.2 Thale cress cytosol 37.33 33.73
AT1G35260.1 Thale cress cytosol 34.0 33.55
KRH37979 Soybean cytosol 34.67 33.55
Bra007947.1-P Field mustard cytosol 35.33 33.54
CDX68328 Canola cytosol 36.0 32.93
Bra016180.1-P Field mustard cytosol 30.0 32.61
CDY23474 Canola cytosol 35.33 32.52
KRH13947 Soybean cytosol 33.33 32.26
PGSC0003DMT400044158 Potato cytosol 30.67 31.94
CDX72752 Canola cytosol 29.33 31.88
Bra012362.1-P Field mustard cytosol 34.0 31.88
CDY12484 Canola cytosol 34.0 31.88
CDY41465 Canola cytosol 33.33 31.85
Bra016364.1-P Field mustard cytosol 33.33 31.85
CDY03713 Canola cytosol 32.67 31.82
AT1G35310.1 Thale cress cytosol 32.0 31.79
CDY09499 Canola cytosol 28.67 31.39
CDX91696 Canola cytosol 32.67 31.21
CDY17433 Canola cytosol 30.67 30.46
CDX96283 Canola cytosol 28.0 30.43
Bra016181.1-P Field mustard cytosol 28.0 30.43
Bra016178.1-P Field mustard cytosol 32.0 30.38
CDY25772 Canola cytosol 32.0 30.19
Bra012364.1-P Field mustard cytosol 32.0 30.19
PGSC0003DMT400059724 Potato cytosol 43.33 30.09
AT1G23130.1 Thale cress cytosol 32.0 30.0
Bra016182.1-P Field mustard cytosol 41.33 29.81
CDX72753 Canola cytosol 31.33 29.75
Bra024564.1-P Field mustard cytosol 36.0 29.67
CDY21418 Canola cytosol 36.0 29.67
AT5G28000.1 Thale cress cytosol 32.0 29.27
CDY16542 Canola cytosol 26.0 28.89
CDY00801 Canola cytosol 34.0 28.81
Bra012361.1-P Field mustard cytosol 26.67 28.78
Bra016179.1-P Field mustard cytosol 28.0 28.57
KRH13946 Soybean cytosol 29.33 28.39
KRH13944 Soybean cytosol 26.0 27.86
CDX92456 Canola cytosol 24.67 27.41
CDY41463 Canola cytosol 29.33 27.33
CDY12480 Canola cytosol 29.33 27.33
Bra016362.1-P Field mustard cytosol 29.33 27.33
CDY12485 Canola cytosol 18.0 27.27
Bra002309.1-P Field mustard cytosol 24.0 26.67
CDY09492 Canola cytosol 40.67 26.64
CDY03718 Canola cytosol 40.67 26.64
Bra007945.1-P Field mustard cytosol 40.67 26.64
CDY12482 Canola cytosol 22.0 26.4
CDX96282 Canola cytosol 21.33 26.23
CDY25771 Canola cytosol 24.67 23.27
Bra012363.1-P Field mustard cytosol 24.67 22.98
CDY70076 Canola cytosol 22.0 22.76
PGSC0003DMT400020053 Potato cytosol 44.67 22.64
CDY68859 Canola cytosol 21.33 22.07
PGSC0003DMT400075928 Potato cytosol 43.33 21.89
CDY11541 Canola cytosol 21.33 20.65
Bra007949.1-P Field mustard cytosol 34.67 20.63
AT1G70850.1 Thale cress cytosol 40.0 18.99
AT1G70830.1 Thale cress cytosol 39.33 17.61
Protein Annotations
EnsemblPlants:PGSC0003DMT400025429EnsemblPlantsGene:PGSC0003DMG400009817EntrezGene:102605731Gene3D:3.30.530.20GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PANTHER:PTHR31907:SF4PFAM:PF00407PGSC:PGSC0003DMG400009817RefSeq:XP_006365602.1SMART:SM01037SUPFAM:SSF55961
UniParc:UPI000295AFD0UniProt:M1ALE9MapMan:35.1:::
Description
Major latex [Source:PGSC_GENE;Acc:PGSC0003DMG400009817]
Coordinates
chr9:+:8283186..8284170
Molecular Weight (calculated)
17107.5 Da
IEP (calculated)
5.258
GRAVY (calculated)
-0.316
Length
150 amino acids
Sequence
(BLAST)
001: MGLKSVLCGK VEMKANKDVF HDIFTNKPHH VSTMSPLHIQ GFELLEGDIG IVGSKICWNY TLDGEKKISK QILETIDHEK KVLTLKEFEG DVIDKYDSFK
101: ATLHIETKDE IDLVSWTLEY ERPNENVPEL INVLNFVVGM TKAIDDHHAN
Best Arabidopsis Sequence Match ( AT1G70830.5 )
(BLAST)
001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEE
Arabidopsis Description
MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.