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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70076 Canola cytosol 93.79 93.79
Bra016179.1-P Field mustard cytosol 78.62 77.55
CDY09495 Canola cytosol 60.69 55.7
CDY09499 Canola cytosol 52.41 55.47
CDX72753 Canola cytosol 57.93 53.16
CDY23474 Canola cytosol 59.31 52.76
CDY65619 Canola cytosol 59.31 52.44
CDY03715 Canola cytosol 59.31 52.44
CDX68328 Canola cytosol 59.31 52.44
AT1G70890.1 Thale cress cytosol 55.17 50.63
CDX72752 Canola cytosol 45.52 47.83
CDX96283 Canola cytosol 44.83 47.1
CDY12485 Canola cytosol 31.72 46.46
CDY00801 Canola cytosol 55.86 45.76
CDX91696 Canola cytosol 44.83 41.4
CDY41463 Canola cytosol 45.52 40.99
CDY41465 Canola cytosol 44.14 40.76
CDY12480 Canola cytosol 44.83 40.37
CDY25772 Canola cytosol 42.07 38.36
CDY03713 Canola cytosol 40.69 38.31
CDX89696 Canola cytosol 39.31 37.75
CDY17433 Canola cytosol 39.31 37.75
CDY21418 Canola cytosol 46.21 36.81
CDY03718 Canola cytosol 57.24 36.24
CDY09492 Canola cytosol 56.55 35.81
CDY12484 Canola cytosol 39.31 35.62
KRH13947 Soybean cytosol 37.24 34.84
VIT_01s0011g05150.t01 Wine grape cytosol 33.1 34.78
CDY25771 Canola cytosol 36.55 33.33
Solyc05g046160.1.1 Tomato cytosol 14.48 32.81
VIT_01s0011g05180.t01 Wine grape cytosol 33.79 32.45
KRH37979 Soybean cytosol 34.48 32.26
KRH13946 Soybean cytosol 33.79 31.61
CDY12482 Canola cytosol 26.9 31.2
Solyc04g007830.2.1 Tomato cytosol 28.28 30.6
VIT_01s0011g05190.t01 Wine grape cytosol 31.72 30.46
CDY16542 Canola cytosol 28.28 30.37
CDX92456 Canola cytosol 27.59 29.63
Solyc05g046220.1.1 Tomato cytosol 19.31 29.17
PGSC0003DMT400075925 Potato cytosol 22.07 27.59
Solyc09g005500.2.1 Tomato extracellular 28.28 27.15
CDY09498 Canola cytosol 26.9 26.71
PGSC0003DMT400077743 Potato cytosol 27.59 26.49
CDY03712 Canola cytosol 26.21 26.03
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 26.9 26.0
PGSC0003DMT400022679 Potato cytosol 26.9 25.83
PGSC0003DMT400031386 Potato cytosol 26.9 25.83
PGSC0003DMT400041455 Potato cytosol 26.21 25.17
VIT_01s0011g05170.t01 Wine grape cytosol 11.03 25.0
Solyc05g046150.2.1 Tomato cytosol, extracellular 24.14 23.33
Solyc09g014540.1.1 Tomato cytosol 15.86 22.77
PGSC0003DMT400056811 Potato cytosol 20.0 22.48
KRH13944 Soybean cytosol 21.38 22.14
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 24.14 22.01
Solyc09g014530.2.1 Tomato cytosol, extracellular 22.76 22.0
PGSC0003DMT400091938 Potato cytosol 23.45 21.94
PGSC0003DMT400031542 Potato cytosol 22.76 21.57
PGSC0003DMT400022721 Potato cytosol 22.76 21.57
PGSC0003DMT400073915 Potato cytosol 22.76 21.57
PGSC0003DMT400025429 Potato cytosol 22.07 21.33
CDX96282 Canola cytosol 17.93 21.31
CDY41464 Canola cytosol 21.38 21.09
Solyc09g014550.2.1 Tomato cytosol 22.07 21.05
PGSC0003DMT400073916 Potato cytosol 17.24 20.83
Solyc09g005400.2.1 Tomato cytosol 21.38 20.67
CDY41462 Canola cytosol 20.69 20.55
CDX91697 Canola cytosol 20.69 20.27
PGSC0003DMT400044158 Potato cytosol 20.0 20.14
Solyc09g005420.2.1 Tomato cytosol 20.69 20.0
PGSC0003DMT400059724 Potato cytosol 29.66 19.91
PGSC0003DMT400021867 Potato cytosol 20.69 19.74
PGSC0003DMT400025420 Potato cytosol 20.0 19.21
Solyc09g005410.1.1 Tomato cytosol 17.93 19.12
PGSC0003DMT400021866 Potato cytosol 20.0 19.08
Solyc09g014580.2.1 Tomato cytosol 20.0 19.08
PGSC0003DMT400004549 Potato cytosol 20.0 19.08
PGSC0003DMT400021868 Potato cytosol 19.31 18.67
PGSC0003DMT400025419 Potato cytosol 16.55 18.18
CDY11541 Canola cytosol 19.31 18.06
PGSC0003DMT400041446 Potato cytosol 18.62 18.0
PGSC0003DMT400041449 Potato cytosol 11.72 14.91
PGSC0003DMT400020053 Potato cytosol 30.34 14.86
PGSC0003DMT400075928 Potato cytosol 28.97 14.14
Solyc09g014560.1.1 Tomato cytosol 6.21 12.16
Solyc01g081130.2.1 Tomato cytosol 6.21 11.84
Protein Annotations
EnsemblPlants:CDY68859EnsemblPlantsGene:GSBRNA2T00080447001Gene3D:3.30.530.20GO:A0A078JPZ7GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PFAM:PF00407ProteinID:CDY68859ProteinID:CDY68859.1SMART:SM01037SUPFAM:SSF55961UniParc:UPI0004EED7F6
UniProt:A0A078JPZ7MapMan:35.1::::
Description
BnaC06g43750DBnaC06g43750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JPZ7]
Coordinates
chrLK038147:+:2061..3064
Molecular Weight (calculated)
16274.2 Da
IEP (calculated)
6.156
GRAVY (calculated)
-0.479
Length
145 amino acids
Sequence
(BLAST)
001: MAEAANLVGK LEADVEIKSS AEKFHHISRT VSYRKATGEK SVQWSSGATL LASHYGVATE CKDRVEEVER EKNLITFRVI KSDLLKMYKS FVSRSQVTPK
101: HGGPGGIVHW DLEYEKVSEE VGHPESHLQL SVEVSKDIDE YLLTE
Best Arabidopsis Sequence Match ( AT1G70830.5 )
(BLAST)
001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEE
Arabidopsis Description
MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.