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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016178.1-P Field mustard cytosol 97.47 97.47
CDY09495 Canola cytosol 70.25 70.25
CDY23474 Canola cytosol 67.09 65.03
CDX68328 Canola cytosol 67.09 64.63
CDY03715 Canola cytosol 66.46 64.02
AT1G70890.1 Thale cress cytosol 63.92 63.92
CDY65619 Canola cytosol 65.82 63.41
CDY70076 Canola cytosol 55.7 60.69
CDY09499 Canola cytosol 52.53 60.58
CDY12485 Canola cytosol 36.71 58.59
CDY68859 Canola cytosol 53.16 57.93
CDX72752 Canola cytosol 48.73 55.8
CDY41465 Canola cytosol 53.8 54.14
CDX96283 Canola cytosol 46.84 53.62
CDX91696 Canola cytosol 53.16 53.5
CDY12484 Canola cytosol 53.8 53.12
CDY12480 Canola cytosol 53.8 52.8
CDY03713 Canola cytosol 51.27 52.6
CDY41463 Canola cytosol 52.53 51.55
CDY00801 Canola cytosol 54.43 48.59
CDY25772 Canola cytosol 48.73 48.43
CDY21418 Canola cytosol 55.7 48.35
CDX89696 Canola cytosol 46.2 48.34
CDY17433 Canola cytosol 44.94 47.02
CDY12482 Canola cytosol 36.71 46.4
CDY03718 Canola cytosol 65.82 45.41
VIT_01s0011g05170.t01 Wine grape cytosol 18.35 45.31
CDY25771 Canola cytosol 45.57 45.28
CDY09492 Canola cytosol 64.56 44.54
KRH13947 Soybean cytosol 42.41 43.23
CDY16542 Canola cytosol 36.71 42.96
KRH37979 Soybean cytosol 41.77 42.58
CDX92456 Canola cytosol 36.08 42.22
VIT_01s0011g05150.t01 Wine grape cytosol 36.71 42.03
VIT_01s0011g05190.t01 Wine grape cytosol 37.97 39.74
KRH13946 Soybean cytosol 38.61 39.35
VIT_01s0011g05180.t01 Wine grape cytosol 36.71 38.41
PGSC0003DMT400075925 Potato cytosol 25.95 35.34
Solyc05g046150.2.1 Tomato cytosol, extracellular 32.91 34.67
Solyc05g046160.1.1 Tomato cytosol 13.92 34.38
Solyc04g007830.2.1 Tomato cytosol 29.11 34.33
Solyc05g046140.2.1 Tomato endoplasmic reticulum, extracellular 32.28 34.0
PGSC0003DMT400041455 Potato cytosol 32.28 33.77
PGSC0003DMT400031386 Potato cytosol 32.28 33.77
PGSC0003DMT400022679 Potato cytosol 32.28 33.77
PGSC0003DMT400077743 Potato cytosol 32.28 33.77
CDX96282 Canola cytosol 25.95 33.61
PGSC0003DMT400056811 Potato cytosol 27.22 33.33
Solyc09g005500.2.1 Tomato extracellular 31.65 33.11
CDY09498 Canola cytosol 29.75 32.19
CDY03712 Canola cytosol 29.75 32.19
PGSC0003DMT400022721 Potato cytosol 31.01 32.03
PGSC0003DMT400073915 Potato cytosol 31.01 32.03
PGSC0003DMT400031542 Potato cytosol 30.38 31.37
PGSC0003DMT400025429 Potato cytosol 29.75 31.33
Solyc05g046220.1.1 Tomato cytosol 18.99 31.25
Solyc09g014550.2.1 Tomato cytosol 29.75 30.92
PGSC0003DMT400041449 Potato cytosol 22.15 30.7
PGSC0003DMT400073916 Potato cytosol 22.78 30.0
Solyc09g005400.2.1 Tomato cytosol 27.85 29.33
KRH13944 Soybean cytosol 25.95 29.29
PGSC0003DMT400091938 Potato cytosol 28.48 29.03
PGSC0003DMT400021867 Potato cytosol 27.85 28.95
Solyc07g008710.2.1 Tomato cytosol, extracellular, nucleus 29.11 28.93
Solyc09g014530.2.1 Tomato cytosol, extracellular 27.22 28.67
Solyc09g005420.2.1 Tomato cytosol 27.22 28.67
CDY41464 Canola cytosol 26.58 28.57
PGSC0003DMT400025420 Potato cytosol 27.22 28.48
CDY11541 Canola cytosol 27.85 28.39
Solyc09g014560.1.1 Tomato cytosol 13.29 28.38
PGSC0003DMT400025419 Potato cytosol 23.42 28.03
PGSC0003DMT400021868 Potato cytosol 26.58 28.0
Solyc09g014580.2.1 Tomato cytosol 26.58 27.63
Solyc01g081130.2.1 Tomato cytosol 13.29 27.63
PGSC0003DMT400041446 Potato cytosol 25.95 27.33
Solyc09g005410.1.1 Tomato cytosol 23.42 27.21
PGSC0003DMT400021866 Potato cytosol 25.95 26.97
CDX91697 Canola cytosol 24.68 26.35
PGSC0003DMT400004549 Potato cytosol 25.32 26.32
CDY41462 Canola cytosol 24.05 26.03
PGSC0003DMT400059724 Potato cytosol 33.54 24.54
PGSC0003DMT400044158 Potato cytosol 20.89 22.92
Solyc09g014540.1.1 Tomato cytosol 13.92 21.78
PGSC0003DMT400020053 Potato cytosol 34.81 18.58
PGSC0003DMT400075928 Potato cytosol 34.18 18.18
Protein Annotations
EnsemblPlants:CDX72753EnsemblPlantsGene:GSBRNA2T00103129001Gene3D:3.30.530.20GO:A0A078CCN0GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907
PANTHER:PTHR31907:SF4PFAM:PF00407ProteinID:CDX72753ProteinID:CDX72753.1SMART:SM01037SUPFAM:SSF55961
UniParc:UPI0004EDEBA1MapMan:35.1::::
Description
BnaC06g32010D
Coordinates
chrLK031797:-:19003..20399
Molecular Weight (calculated)
17659.2 Da
IEP (calculated)
4.718
GRAVY (calculated)
-0.216
Length
158 amino acids
Sequence
(BLAST)
001: MAEATSLVGK LEADVEIKAS AGKFHDMFAG RQGEWLEATP GKIKSCELLE GDWGKLASVV LWNYVHDGEA AMTKKRVEAV DPEKNLIKFR VIEGDMMKDF
101: KSFVSTIQVI PKHGEPGSVV KWHMEYEKII VDAGHPETIL QLAVEISKDI DEYLLAEE
Best Arabidopsis Sequence Match ( AT1G70830.2 )
(BLAST)
001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEEEEVKTPE TPSLVGKLET DVEIKASAEK
201: FHHMFAGKPH HVSKASPGNI QGCDLHEGDW GQVGSIVFWN YVHGKGKGG
Arabidopsis Description
MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.